FFCP PHASE1:Hg19::chr22:39077947..39077986,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:39077947..39077986,+
|short_description=p1@TOMM22
|description=CAGE_peak_1_at_TOMM22_5end
|association_with_transcript=0bp_to_ENST00000216034,NM_020243,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56993 | |EntrezGene=56993 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18002 | |HGNC=18002 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NS69,Q549C5 | |UniProt=Q9NS69,Q549C5 | ||
|association_with_transcript=0bp_to_ENST00000216034,NM_020243,uc003awe.2_5end | |||
|cluster_id=chr22:39077947..39077986,+ | |||
|description=CAGE_peak_1_at_TOMM22_5end | |||
|id=chr22:39077947..39077986,+ | |||
|ontology_enrichment_celltype=CL:0000012!1.65e-22!682;CL:0000548!6.15e-22!679;CL:0000004!6.15e-22!679;CL:0000255!6.15e-22!679;CL:0002321!1.11e-18!248;CL:0000220!4.09e-18!246;CL:0000144!9.97e-17!625;CL:0000222!6.30e-15!119;CL:0000003!1.79e-13!722;CL:0002371!6.32e-13!591;CL:0000393!7.78e-12!60;CL:0000211!7.78e-12!60;CL:0000183!5.59e-11!59;CL:0000066!1.63e-10!254;CL:0000187!4.95e-10!54;CL:0000680!9.15e-10!57;CL:0000056!9.15e-10!57;CL:0000355!9.15e-10!57;CL:0000071!6.53e-08!18;CL:0002546!6.53e-08!18;CL:0000115!1.44e-07!35;CL:0000192!2.07e-07!42;CL:0000514!2.07e-07!42;CL:0002139!6.39e-07!24;CL:0002078!6.85e-07!44;CL:1000449!7.44e-07!16;CL:0000055!9.48e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000071;6.62e-08;18!CL:1000449;3.08e-07;15!CL:0002139;6.35e-07;24!CL:0000115;7.22e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,5.92e-19,250;CL:0000222,3.75e-15,121;CL:0000393,1.20e-11,61;CL:0000211,1.20e-11,61;CL:0000066,1.49e-10,253;CL:0000187,7.38e-10,55;CL:0000680,1.32e-09,58;CL:0000056,1.32e-09,58;CL:0000355,1.32e-09,58;CL:0000115,6.27e-08,36;CL:0000071,6.53e-08,18;CL:0002546,6.53e-08,18;CL:0000192,2.97e-07,43;CL:0000514,2.97e-07,43;CL:1000449,3.02e-07,15;CL:0002078,3.20e-07,45;CL:0002139,6.39e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002546;6.62e-08;18 | |||
|ontology_enrichment_disease=DOID:2531!3.40e-09!51;DOID:0060083!3.40e-09!51;DOID:1240!1.11e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.40e-09,51;DOID:0060083,3.40e-09,51;DOID:1240,1.11e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0000490!3.64e-12!138;UBERON:0003104!1.06e-11!238;UBERON:0009142!1.06e-11!238;UBERON:0004290!1.39e-11!70;UBERON:0005256!2.84e-11!143;UBERON:0000914!8.32e-11!83;UBERON:0002329!8.32e-11!83;UBERON:0003077!8.32e-11!83;UBERON:0003059!8.32e-11!83;UBERON:0007282!8.32e-11!83;UBERON:0009618!8.32e-11!83;UBERON:0007285!8.32e-11!83;UBERON:0000486!1.52e-10!82;UBERON:0001134!1.00e-09!61;UBERON:0002036!1.00e-09!61;UBERON:0003082!1.00e-09!61;UBERON:0003914!1.35e-09!118;UBERON:0002385!7.70e-09!63;UBERON:0001015!7.70e-09!63;UBERON:0000383!7.70e-09!63;UBERON:0002049!8.20e-09!79;UBERON:0007798!8.20e-09!79;UBERON:0000055!1.06e-08!69;UBERON:0001981!1.67e-08!60;UBERON:0007500!1.67e-08!60;UBERON:0004537!1.67e-08!60;UBERON:0006965!1.67e-08!60;UBERON:0001986!6.53e-08!18;UBERON:0004638!6.53e-08!18;UBERON:0004852!6.53e-08!18;UBERON:0000487!9.85e-08!22;UBERON:0002100!1.29e-07!216;UBERON:0001637!2.56e-07!42;UBERON:0003509!2.56e-07!42;UBERON:0004572!2.56e-07!42;UBERON:0004872!2.93e-07!84;UBERON:0004211!7.44e-07!16;UBERON:0001285!7.44e-07!16;UBERON:0007684!7.44e-07!16;UBERON:0003220!7.44e-07!16;UBERON:0004208!7.44e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;6.62e-08;18!UBERON:0001986;6.62e-08;18!UBERON:0004852;6.62e-08;18!UBERON:0000487;9.61e-08;22!UBERON:0003914;1.70e-07;74!UBERON:0006555;3.08e-07;15!UBERON:0004819;3.08e-07;15!UBERON:0001285;3.08e-07;15!UBERON:0007684;3.08e-07;15!UBERON:0000490;8.90e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,2.53e-14,78;UBERON:0000490,6.97e-14,148;UBERON:0002329,2.00e-11,71;UBERON:0003059,2.00e-11,71;UBERON:0007282,2.00e-11,71;UBERON:0004290,2.00e-11,71;UBERON:0009618,2.00e-11,71;UBERON:0003104,3.89e-11,160;UBERON:0009142,3.89e-11,160;UBERON:0003077,8.00e-11,72;UBERON:0007285,8.00e-11,72;UBERON:0007524,1.17e-10,73;UBERON:0000486,2.01e-10,83;UBERON:0003914,1.12e-09,117;UBERON:0001134,1.42e-09,62;UBERON:0002036,1.42e-09,62;UBERON:0003082,1.42e-09,62;UBERON:0005256,1.56e-09,122;UBERON:0002049,3.32e-09,78;UBERON:0007798,3.32e-09,78;UBERON:0000055,3.99e-09,68;UBERON:0007500,5.87e-09,59;UBERON:0001981,5.87e-09,59;UBERON:0004537,5.87e-09,59;UBERON:0006965,5.87e-09,59;UBERON:0002385,1.04e-08,64;UBERON:0001015,1.04e-08,64;UBERON:0000383,1.04e-08,64;UBERON:0002100,3.15e-08,199;UBERON:0004638,6.53e-08,18;UBERON:0001986,6.53e-08,18;UBERON:0004852,6.53e-08,18;UBERON:0000487,9.85e-08,22;UBERON:0004872,1.37e-07,83;UBERON:0001637,2.56e-07,42;UBERON:0003509,2.56e-07,42;UBERON:0004572,2.56e-07,42;UBERON:0004211,3.02e-07,15;UBERON:0009773,3.02e-07,15;UBERON:0001231,3.02e-07,15;UBERON:0001285,3.02e-07,15;UBERON:0007684,3.02e-07,15;UBERON:0004208,3.02e-07,15 | |||
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13036286797,103.223054521641 | ||
|short_description=p1@TOMM22 | |||
}} | }} |
Latest revision as of 16:08, 24 September 2015
Short description: | p1@TOMM22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TOMM22_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000216034, NM_020243, uc003awe.2_5end |
EntrezGene: | TOMM22 |
HGNC: | 18002 |
UniProt: | Q9NS69Q549C5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 5.92e-19 | 250 |
mesodermal cell | 3.75e-15 | 121 |
electrically responsive cell | 1.20e-11 | 61 |
electrically active cell | 1.20e-11 | 61 |
epithelial cell | 1.49e-10 | 253 |
muscle cell | 7.38e-10 | 55 |
muscle precursor cell | 1.32e-09 | 58 |
myoblast | 1.32e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.32e-09 | 58 |
endothelial cell | 6.27e-08 | 36 |
blood vessel endothelial cell | 6.53e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.53e-08 | 18 |
smooth muscle cell | 2.97e-07 | 43 |
smooth muscle myoblast | 2.97e-07 | 43 |
epithelial cell of nephron | 3.02e-07 | 15 |
meso-epithelial cell | 3.20e-07 | 45 |
endothelial cell of vascular tree | 6.39e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.40e-09 | 51 |
immune system cancer | 3.40e-09 | 51 |
leukemia | 1.11e-07 | 39 |