FFCP PHASE1:Hg19::chr6:130687449..130687474,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114801 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=21075 | |||
|TSSclassifier=strong | |||
|UniProt=A8K2A1 | |||
|association_with_transcript=-55bp_to_AK315824_5end | |||
|cluster_id=chr6:130687449..130687474,+ | |||
|coexpression_cluster_id=C714 | |||
|description=CAGE_peak_5_at_TMEM200A_5end | |||
|id=chr6:130687449..130687474,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.87e-34!180;CL:0000192!1.49e-19!42;CL:0000514!1.49e-19!42;CL:0000680!1.01e-18!57;CL:0000056!1.01e-18!57;CL:0000355!1.01e-18!57;CL:0000187!2.01e-18!54;CL:0000359!2.89e-18!32;CL:0000057!6.18e-18!75;CL:0000183!1.17e-16!59;CL:0000393!1.17e-16!60;CL:0000211!1.17e-16!60;CL:0002334!7.34e-08!12;CL:0002539!1.56e-07!10;CL:0000222!4.47e-07!119;CL:0002620!7.66e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.24e-23;32!CL:0000192;1.57e-17;43!CL:0002334;3.30e-10;12!CL:0002539;7.50e-10;10!CL:0000187;4.72e-09;55!CL:0000393;1.55e-07;61!CL:0000211;1.55e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.02e-25,43;CL:0000514,3.02e-25,43;CL:0000359,5.40e-25,32;CL:0000187,8.14e-18,55;CL:0000057,2.69e-17,76;CL:0000680,4.30e-17,58;CL:0000056,4.30e-17,58;CL:0000355,4.30e-17,58;CL:0000393,2.13e-15,61;CL:0000211,2.13e-15,61;CL:0002334,3.01e-10,12;CL:0000723,4.54e-10,433;CL:0002539,8.47e-10,10;CL:0000034,9.06e-10,441;CL:0000048,1.34e-09,427;CL:0000222,7.65e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;1.57e-17;43!CL:0000355;1.15e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!1.98e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.82e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.19e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.68e-21!83;UBERON:0002329!1.68e-21!83;UBERON:0003077!1.68e-21!83;UBERON:0003059!1.68e-21!83;UBERON:0007282!1.68e-21!83;UBERON:0009618!1.68e-21!83;UBERON:0007285!1.68e-21!83;UBERON:0004290!1.04e-18!70;UBERON:0000486!1.27e-17!82;UBERON:0002385!1.51e-17!63;UBERON:0001015!1.51e-17!63;UBERON:0000383!1.51e-17!63;UBERON:0001134!2.35e-17!61;UBERON:0002036!2.35e-17!61;UBERON:0003082!2.35e-17!61;UBERON:0000475!1.15e-11!365;UBERON:0005256!2.53e-11!143;UBERON:0001637!5.14e-10!42;UBERON:0003509!5.14e-10!42;UBERON:0004572!5.14e-10!42;UBERON:0004573!2.46e-09!33;UBERON:0004571!2.46e-09!33;UBERON:0002100!8.85e-09!216;UBERON:0003102!3.01e-08!95;UBERON:0000481!4.32e-08!347;UBERON:0001135!5.26e-08!15;UBERON:0002049!1.16e-07!79;UBERON:0007798!1.16e-07!79;UBERON:0004237!1.56e-07!10;UBERON:0004695!1.56e-07!10;UBERON:0002111!1.56e-07!10;UBERON:0004178!1.56e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.99e-13;33!UBERON:0004571;5.99e-13;33!UBERON:0001637;2.41e-10;42!UBERON:0003509;2.41e-10;42!UBERON:0004572;2.41e-10;42!UBERON:0004237;7.50e-10;10!UBERON:0004695;7.50e-10;10!UBERON:0002111;7.50e-10;10!UBERON:0004178;7.50e-10;10!UBERON:0001135;9.52e-09;15!UBERON:0000947;2.30e-07;21!UBERON:0010191;2.30e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,4.57e-17,73;UBERON:0000486,5.21e-17,83;UBERON:0002329,6.33e-17,71;UBERON:0003059,6.33e-17,71;UBERON:0007282,6.33e-17,71;UBERON:0004290,6.33e-17,71;UBERON:0009618,6.33e-17,71;UBERON:0003077,1.86e-16,72;UBERON:0007285,1.86e-16,72;UBERON:0001134,5.50e-16,62;UBERON:0002036,5.50e-16,62;UBERON:0003082,5.50e-16,62;UBERON:0001637,1.23e-15,42;UBERON:0003509,1.23e-15,42;UBERON:0004572,1.23e-15,42;UBERON:0002385,5.10e-15,64;UBERON:0001015,5.10e-15,64;UBERON:0000383,5.10e-15,64;UBERON:0004573,1.64e-14,33;UBERON:0004571,1.64e-14,33;UBERON:0007503,6.17e-14,78;UBERON:0007500,1.98e-10,59;UBERON:0001981,1.98e-10,59;UBERON:0004537,1.98e-10,59;UBERON:0006965,1.98e-10,59;UBERON:0004237,8.47e-10,10;UBERON:0004695,8.47e-10,10;UBERON:0002111,8.47e-10,10;UBERON:0004178,8.47e-10,10;UBERON:0003102,2.62e-09,99;UBERON:0002049,4.59e-09,78;UBERON:0007798,4.59e-09,78;UBERON:0005256,4.66e-09,122;UBERON:0004872,5.42e-09,83;UBERON:0001135,1.67e-08,15;UBERON:0000055,3.80e-08,68;UBERON:0003104,5.81e-08,160;UBERON:0009142,5.81e-08,160;UBERON:0000947,2.42e-07,21;UBERON:0010191,2.42e-07,21;UBERON:0002100,3.92e-07,199 | |||
|phase1_expression=4.1786027232228,2.99740733447376,3.80576891059122,3.00219895059391,1.78784437770915,5.23403114460221,0,1.89515962028049,0.261185628199839,0,0,0,0,1.23766352960047,0.662794751455832,4.03395087871065,6.62963980826375,8.03341099426111,7.80692478064811,0,0.408001382488506,0.626909442956176,0.286235987131057,0,0.125542639594803,0.382067028739756,0.328402357799783,0.393553906568396,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.12101712596307,0,0,0,0.205601498999509,0.167186495390678,0.32592226663359,0,0,0.222820913770347,0,0,0,0.25618263945135,0.130059347559878,0.493313713811028,0.552700035571697,0,0,0,0,0.226618685395132,0.383220493601921,0.68725489096526,0,0,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0,0,0,0,0,0.670700859703636,0.639312809217652,1.80719576192283,1.50401373190767,1.30361867064741,1.5905718941022,0.973269740605272,0.567208902984407,0.886917589850256,0.175669571386252,1.17881167947941,0.364295288292542,0,0,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0.71153252537342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,7.85109172320394,6.62045904066094,11.1866282092037,9.930714701554,1.68203280042692,1.06748995729705,0,0.622422070799533,0,0.653847612453835,0.454072282934794,1.15235184896,0.70296429550139,1.24864030732128,0.570471821544449,2.39117888882882,2.46612447151906,0.809364721840658,1.40450806702248,1.22492502752936,1.59684612505298,1.75653827998801,1.18800285728205,2.71993622206413,0.910161361938026,1.43723628363248,1.68336113954066,1.87677779807946,0.554128230968366,1.75591048352335,1.83892677479412,3.90618953157152,0.226864366320042,1.97328599257748,4.69826255400848,2.11931901159562,0.600182192168805,2.06105058476878,2.31876486041066,2.04728541964749,2.53164498361899,3.50773218580315,0.252433774244115,2.39329736469978,3.87950536365149,1.42003837006646,1.81353776809752,0.847802961552438,5.02478218224572,3.27295344709002,1.43402297694502,0.365921118388786,0.795178609928912,0.348581828608555,0.310983165046111,0.756962552626885,0,0,1.28648187638577,2.76269842704961,0.928735856063958,1.44375896333917,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,1.22988438543114,1.71567810298526,2.30475599358114,0,4.52380375852339,1.574003567695,1.62904152655162,0,1.44331342025273,1.39116485970092,1.99594780200897,0,0,0,0,0,0,0,0,0,3.19166043577833,3.54437743105966,1.16426079513703,1.74380363108377,2.68367875415648,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0.205654985406647,0,0,0.560655421726804,1.74384027533312,1.0267360014933,7.75630294546667,0,0,4.25500986535793,4.16029747645464,0.771622122786426,1.41849132023278,0.799266537048298,0.142977993658148,0.542621605391443,2.46972101034231,0.325736184293735,0,0.791951872933429,9.64606006590676,5.22920075160176,8.29775826811074,0,0,0,0.718874566474748,1.14861935834114,8.5582143024431,0.723906533337896,1.84928690295345,0.358121926479791,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0.613457458595699,0.500170521059677,2.17012018959788,2.9115920614313,1.42743191037729,0.473107245101804,1.87426263988341,5.41702979509894,0,3.10419213877515,1.99267679560631,4.05612170791747,2.34585759063824,0.195801157462741,0.686286847621712,0.206768026122887,0,0,0,0,0,5.45837177201309,1.68808170616869,4.2099014164961,5.25370511948374,6.65219423786715,6.27330292460069,4.45254199334973,2.31314540703983,4.26148140751505,4.10635780069046,5.19254429183621,3.95115286763861,0.725156697549733,1.00253235151642,0.460404944679482,1.03333003348146,2.36718518408732,1.04899531967539,1.35359883872224,1.92538342761037,0,0,0.633309773357254,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0,1.53870075069834,0,0.325378394664303,0.515205058238611,0,0,5.16838984196555,0,6.42735719376638,0.96670718292122,0.616194468458578,0.460511024178389,0.413509717453592,0.107420244868274,0.145016693914229,0.340906509664404,0.534192213880424,0,0,0,0,8.83206543664843,29.2775482552495,14.6377826733726,2.15623506123262,1.59691809095107,9.5692629128258,13.3433437754822,4.00749682877575,1.86079184679834,2.21465597303108,2.66882271493355,0.511795582622668,0.42793898803392,5.72765846266686,0,1.07923474549989,1.09814811894422,2.5918728516051,2.83055474202642,1.58510321173008,2.94880919367287,0,10.2359665645139,13.7345190783782,3.8219975194236,2.68670320712054,2.26016233240486,7.71911480964574,7.96126770289464,7.89211593456773,1.15755106853338,1.9676842561399,13.7979056334639,6.8161169581945,10.1410416911607,7.17056761020257,6.18968958382663,11.7701446988813,3.54761064070598,3.58882980006029,1.97576935775941,0.75894634753143,3.84928192269481,0.0962221127255121,0.670302275535787,0,0.376575203107117,0,0,0,0,0,0,0.569647187174163,0,0,0.648473311192717,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,1.01575066680962,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.73254089635947,0,1.44876399560722,0,0,0,0,0,0.140669416410513,4.45234820091624,0,0,0,1.1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| |||
|short_description=p5@TMEM200A | |||
}} |
Latest revision as of 17:36, 24 September 2015
Short description: | p5@TMEM200A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TMEM200A_5end |
Coexpression cluster: | C714_Smooth_Fibroblast_Mesenchymal_mesenchymal_Myoblast_leiomyoma_Preadipocyte |
Association with transcript: | -55bp_to_AK315824_5end |
EntrezGene: | TMEM200A |
HGNC: | 21075 |
UniProt: | A8K2A1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.02e-25 | 43 |
smooth muscle myoblast | 3.02e-25 | 43 |
vascular associated smooth muscle cell | 5.40e-25 | 32 |
muscle cell | 8.14e-18 | 55 |
fibroblast | 2.69e-17 | 76 |
muscle precursor cell | 4.30e-17 | 58 |
myoblast | 4.30e-17 | 58 |
multi-potent skeletal muscle stem cell | 4.30e-17 | 58 |
electrically responsive cell | 2.13e-15 | 61 |
electrically active cell | 2.13e-15 | 61 |
preadipocyte | 3.01e-10 | 12 |
somatic stem cell | 4.54e-10 | 433 |
aortic smooth muscle cell | 8.47e-10 | 10 |
stem cell | 9.06e-10 | 441 |
multi fate stem cell | 1.34e-09 | 427 |
mesodermal cell | 7.65e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.19e-10 | 14 |