FFCP PHASE1:Hg19::chr4:113206315..113206336,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80216 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20917 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-328bp_to_ENST00000514594_5end | |||
|cluster_id=chr4:113206315..113206336,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_ALPK1_5end | |||
|id=chr4:113206315..113206336,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.17e-38!42;CL:0000860!3.17e-36!45;CL:0000738!5.37e-35!140;CL:0002031!1.91e-31!124;CL:0000766!1.24e-29!76;CL:0002087!3.13e-29!119;CL:0000557!7.59e-28!71;CL:0002009!1.75e-26!65;CL:0000988!1.71e-25!182;CL:0000839!2.85e-25!70;CL:0000037!4.25e-25!172;CL:0000566!4.25e-25!172;CL:0002194!1.78e-24!63;CL:0000576!1.78e-24!63;CL:0000040!1.78e-24!63;CL:0000559!1.78e-24!63;CL:0002032!4.34e-24!165;CL:0000837!4.34e-24!165;CL:0000763!5.71e-18!112;CL:0000049!5.71e-18!112;CL:0000048!1.90e-10!430;CL:0000034!3.42e-10!444;CL:0000723!6.42e-10!436;CL:0000134!8.11e-10!358;CL:0002320!3.57e-09!365;CL:0000219!4.44e-08!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.26e-52;33!CL:0002057;7.26e-52;33!CL:0000473;8.14e-40;39!CL:0000234;8.14e-40;39!CL:0000576;6.67e-29;48!CL:0000766;1.94e-24;69!CL:0002087;7.71e-14;104!CL:0000763;1.59e-12;100!CL:0000623;2.57e-11;3!CL:0000738;2.37e-09;136!CL:0000771;8.79e-08;2!CL:0000988;9.43e-08;177!CL:0000081;1.65e-07;11!CL:0000097;6.58e-07;5!CL:0000094;8.13e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.88e-57,42;CL:0002057,6.88e-57,42;CL:0000473,1.01e-52,48;CL:0000234,1.01e-52,48;CL:0000766,5.92e-52,72;CL:0000557,6.16e-47,67;CL:0000738,6.84e-45,136;CL:0000839,1.65e-44,66;CL:0002009,2.74e-42,61;CL:0002194,1.11e-40,59;CL:0000576,1.11e-40,59;CL:0000040,1.11e-40,59;CL:0000559,1.11e-40,59;CL:0002031,1.92e-40,120;CL:0000988,3.54e-39,177;CL:0000037,4.02e-36,168;CL:0002087,1.32e-35,115;CL:0002032,1.66e-34,161;CL:0000837,1.66e-34,161;CL:0000763,4.81e-34,108;CL:0000049,4.81e-34,108;CL:0000134,5.17e-17,354;CL:0002320,1.84e-16,361;CL:0000219,1.62e-14,386;CL:0000034,3.74e-12,441;CL:0000048,3.86e-12,427;CL:0000723,8.22e-12,433;CL:0000623,2.05e-11,3;CL:0000825,2.05e-11,3;CL:0000771,8.95e-08,2;CL:0000081,1.78e-07,11;CL:0000097,6.59e-07,5;CL:0002028,6.59e-07,5;CL:0000094,8.60e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.10e-40;42!CL:0000049;9.84e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.06e-24!80;UBERON:0002390!2.87e-23!102;UBERON:0003061!2.87e-23!102;UBERON:0002193!8.60e-23!112;UBERON:0001474!1.17e-21!86;UBERON:0002405!3.79e-18!115;UBERON:0004765!2.78e-16!101;UBERON:0001434!2.78e-16!101;UBERON:0003081!7.81e-16!216;UBERON:0002204!2.19e-11!167;UBERON:0002384!1.11e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.82e-43,76;UBERON:0002390,8.95e-41,98;UBERON:0003061,8.95e-41,98;UBERON:0001474,2.09e-39,82;UBERON:0002193,3.51e-36,108;UBERON:0004765,3.42e-35,90;UBERON:0002405,8.49e-34,93;UBERON:0001434,7.25e-31,100;UBERON:0003081,2.69e-17,203;UBERON:0002384,1.04e-15,371;UBERON:0002204,3.08e-15,167;UBERON:0000926,6.13e-08,315;UBERON:0004120,6.13e-08,315;UBERON:0006603,6.13e-08,315 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0.305653622991805,0.410502947249729,0.0787107813136792,0,0,0.77408061658038,0,0,0,0.0774672005803016,0,1.17440175733939,4.43196326825502,2.4065333696417,4.12320654360118,0,0,0,0,0.755751887377619,0.242584061187816,1.62700325833979,0.411167888021826,1.85823822537062,17.8369283239733,12.0395532068677,21.9928473796384,10.3423704220986,9.03678557017357,10.8341189275473,0.941211697713023,0.818718450173537,1.57306439111559,9.48860066349798,6.09765151444578,9.59005688698562,1.9791078011203,1.39624560335142,3.40979800426155,9.86711411337186,10.7803192691317,12.4564449799115,2.76373531782418,2.08593167368081,9.33912032232002,10.2917915447673,14.7311054395026,18.9877432464531,0,0.212604299965044,0.419317291016752,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0.853460445133014,0.400395987036012,0,0,0,0.569212969109448,0,0,1.32171328579026,0.560508562981536,0,1.57367816091066,2.75107533924415,2.2616164889946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,2.41928091869679,3.7441627409691,1.44824403882799,0,0,0,0,0,0,0.795285947051099,0,0.0945348171640679,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0.208994966536811,0,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0.132409180813219,0,0,0,0,0.74000264525148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.761016608938393,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28060927094849,6.05303804351238,2.5248486685276,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0,0,0,0,0,0,0,0,0,2.95546140302891,4.31255149719035,3.85029108839245,0,0,0.773288812777695,0,0,1.49801404789436,0,1.24324654030811,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0.215714200818617,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,3.08454505380579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0.6970372701606,0,0,0,0.18532421910392,0.429374660225974,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.222617410045812,0,0,0.398495976502139,0,0,0.20453736500431,0.123084805461069,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,4.15129580152871,1.97702302314405,1.14864144456001,0.067401132980677,0,0,0,0,0,0,0,0,0.252746318513952,0.751617097072463,0,0,0,0,0,0,0.138674673013139,0,0,0.0870592065804026,0,0,0.0967563312890851,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0.279282401272254,0,0.717873024576814,0.199679000498991,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0.136203406111576,0,0,0,0.674921674654501,4.6428117273477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0.704815022316672,0,0.157204305099666,0,0,0,0.365377795142688,0,2.1760712134779,6.0165574565448,4.90152922821539,3.60659893780785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,1.08806040407946,0.147855149989634,0.159296767163702,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.59996218756479,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0.606965604236632,0,0,0,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0.22910686854405,0.62041277132864,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p3@ALPK1 | |||
}} |
Latest revision as of 17:48, 24 September 2015
Short description: | p3@ALPK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ALPK1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -328bp_to_ENST00000514594_5end |
EntrezGene: | ALPK1 |
HGNC: | 20917 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.82e-43 | 76 |
hematopoietic system | 8.95e-41 | 98 |
blood island | 8.95e-41 | 98 |
bone element | 2.09e-39 | 82 |
hemolymphoid system | 3.51e-36 | 108 |
skeletal element | 3.42e-35 | 90 |
immune system | 8.49e-34 | 93 |
skeletal system | 7.25e-31 | 100 |
lateral plate mesoderm | 2.69e-17 | 203 |
connective tissue | 1.04e-15 | 371 |
musculoskeletal system | 3.08e-15 | 167 |
mesoderm | 6.13e-08 | 315 |
mesoderm-derived structure | 6.13e-08 | 315 |
presumptive mesoderm | 6.13e-08 | 315 |