FFCP PHASE1:Hg19::chr22:40297138..40297143,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr22:40297138..40297143,+
|short_description=p8@GRAP2
|description=CAGE_peak_8_at_GRAP2_5end
|association_with_transcript=25bp_to_ENST00000540310_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9402 | |EntrezGene=9402 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4563 | |HGNC=4563 | ||
|TSSclassifier=strong | |||
|UniProt=F5H548 | |UniProt=F5H548 | ||
|association_with_transcript=25bp_to_ENST00000540310_5end | |||
|cluster_id=chr22:40297138..40297143,+ | |||
|coexpression_cluster_id=C2218 | |||
|description=CAGE_peak_8_at_GRAP2_5end | |||
|id=chr22:40297138..40297143,+ | |||
|ontology_enrichment_celltype=CL:0000542!6.88e-41!53;CL:0000051!6.88e-41!53;CL:0000838!1.17e-39!52;CL:0000037!9.36e-36!172;CL:0000566!9.36e-36!172;CL:0000988!1.24e-32!182;CL:0002032!1.55e-32!165;CL:0000837!1.55e-32!165;CL:0000738!1.63e-31!140;CL:0000791!3.47e-30!18;CL:0000789!3.47e-30!18;CL:0002420!3.47e-30!18;CL:0002419!3.47e-30!18;CL:0000790!3.47e-30!18;CL:0000084!6.54e-28!25;CL:0000827!6.54e-28!25;CL:0002031!5.25e-25!124;CL:0002087!1.98e-23!119;CL:0000625!5.25e-20!11;CL:0002274!7.38e-11!5;CL:0000457!7.38e-11!5;CL:0002191!7.38e-11!5;CL:0000097!7.38e-11!5;CL:0000831!7.38e-11!5;CL:0002028!7.38e-11!5;CL:0000945!1.48e-10!24;CL:0000826!1.48e-10!24;CL:0000624!1.76e-10!6;CL:0000134!3.23e-07!358;CL:0002320!9.09e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.24e-37;18!CL:0000789;1.24e-37;18!CL:0002419;1.24e-37;18!CL:0000625;1.13e-34;11!CL:0000084;1.13e-33;25!CL:0000097;4.84e-18;5!CL:0000542;2.88e-17;53!CL:0000163;7.78e-10;9!CL:0000624;1.29e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.19e-37,18;CL:0000789,1.19e-37,18;CL:0002420,1.19e-37,18;CL:0002419,1.19e-37,18;CL:0000790,1.19e-37,18;CL:0000625,1.31e-34,11;CL:0000084,1.53e-33,25;CL:0000827,1.53e-33,25;CL:0000838,9.79e-32,52;CL:0000542,5.18e-31,53;CL:0000051,5.18e-31,53;CL:0000738,1.10e-21,136;CL:0000097,3.46e-18,5;CL:0002028,3.46e-18,5;CL:0000037,5.15e-17,168;CL:0002031,2.05e-16,120;CL:0000988,1.08e-15,177;CL:0002032,1.69e-14,161;CL:0000837,1.69e-14,161;CL:0002087,5.00e-13,115;CL:0000163,6.51e-10,9;CL:0000624,1.14e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000790;1.24e-37;18!CL:0000051;2.88e-17;53 | |||
|ontology_enrichment_disease=DOID:1036!1.81e-11!8;DOID:2531!1.10e-08!51;DOID:0060083!1.10e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.34e-12!7;UBERON:0000178!1.36e-08!15;UBERON:0000179!1.36e-08!15;UBERON:0000463!1.36e-08!15;UBERON:0002370!2.91e-08!4;UBERON:0005058!2.91e-08!4;UBERON:0009113!2.91e-08!4;UBERON:0003295!2.91e-08!4;UBERON:0005562!2.91e-08!4;UBERON:0002390!2.43e-07!102;UBERON:0003061!2.43e-07!102;UBERON:0002193!2.76e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.02e-12;15!UBERON:0000179;1.02e-12;15!UBERON:0000463;1.02e-12;15!UBERON:0002390;2.63e-09;32!UBERON:0002370;5.16e-08;2!UBERON:0005058;5.16e-08;2!UBERON:0009113;5.16e-08;2!UBERON:0004177;7.54e-07;5!UBERON:0005057;7.54e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.67e-12,15;UBERON:0000179,1.67e-12,15;UBERON:0000463,1.67e-12,15;UBERON:0002370,1.70e-08,4;UBERON:0005058,1.70e-08,4;UBERON:0009113,1.70e-08,4;UBERON:0003295,1.70e-08,4;UBERON:0005562,1.70e-08,4;UBERON:0004177,3.56e-08,7;UBERON:0005057,3.56e-08,7 | |||
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| ||
|short_description=p8@GRAP2 | |||
}} | }} |
Latest revision as of 19:20, 24 September 2015
Short description: | p8@GRAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GRAP2_5end |
Coexpression cluster: | C2218_Mast_splenic_CD8_thymus_CD4_Hodgkin_Natural |
Association with transcript: | 25bp_to_ENST00000540310_5end |
EntrezGene: | GRAP2 |
HGNC: | 4563 |
UniProt: | F5H548 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.19e-37 | 18 |
alpha-beta T cell | 1.19e-37 | 18 |
immature T cell | 1.19e-37 | 18 |
mature T cell | 1.19e-37 | 18 |
immature alpha-beta T cell | 1.19e-37 | 18 |
CD8-positive, alpha-beta T cell | 1.31e-34 | 11 |
T cell | 1.53e-33 | 25 |
pro-T cell | 1.53e-33 | 25 |
lymphoid lineage restricted progenitor cell | 9.79e-32 | 52 |
lymphocyte | 5.18e-31 | 53 |
common lymphoid progenitor | 5.18e-31 | 53 |
leukocyte | 1.10e-21 | 136 |
mast cell | 3.46e-18 | 5 |
basophil mast progenitor cell | 3.46e-18 | 5 |
hematopoietic stem cell | 5.15e-17 | 168 |
hematopoietic lineage restricted progenitor cell | 2.05e-16 | 120 |
hematopoietic cell | 1.08e-15 | 177 |
hematopoietic oligopotent progenitor cell | 1.69e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.69e-14 | 161 |
nongranular leukocyte | 5.00e-13 | 115 |
endocrine cell | 6.51e-10 | 9 |
CD4-positive, alpha-beta T cell | 1.14e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
blood | 1.67e-12 | 15 |
haemolymphatic fluid | 1.67e-12 | 15 |
organism substance | 1.67e-12 | 15 |
thymus | 1.70e-08 | 4 |
hemolymphoid system gland | 1.70e-08 | 4 |
thymic region | 1.70e-08 | 4 |
pharyngeal gland | 1.70e-08 | 4 |
thymus primordium | 1.70e-08 | 4 |
hemopoietic organ | 3.56e-08 | 7 |
immune organ | 3.56e-08 | 7 |