FFCP PHASE1:Hg19::chr8:101322211..101322226,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25897 | |EntrezGene=25897 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13432 | |HGNC=13432 | ||
|TSSclassifier=strong | |||
|UniProt=E5RJH6 | |UniProt=E5RJH6 | ||
|association_with_transcript=-73bp_to_ENST00000523481_5end | |association_with_transcript=-73bp_to_ENST00000523481_5end | ||
|cluster_id=chr8:101322211..101322226,- | |||
|description=CAGE_peak_5_at_RNF19A_5end | |description=CAGE_peak_5_at_RNF19A_5end | ||
|id=chr8:101322211..101322226,- | |id=chr8:101322211..101322226,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.22e-18!115;UBERON:0000062!1.15e-11!511;UBERON:0001049!2.98e-10!57;UBERON:0005068!2.98e-10!57;UBERON:0006241!2.98e-10!57;UBERON:0007135!2.98e-10!57;UBERON:0001017!3.99e-08!82;UBERON:0000468!4.98e-08!659;UBERON:0002616!6.85e-08!59;UBERON:0001869!8.08e-08!32;UBERON:0001893!8.88e-08!34;UBERON:0002020!1.13e-07!34;UBERON:0003528!1.13e-07!34;UBERON:0003080!1.32e-07!42;UBERON:0000480!1.42e-07!626;UBERON:0005743!1.74e-07!86;UBERON:0002791!1.80e-07!33;UBERON:0000467!1.99e-07!625;UBERON:0000955!2.65e-07!69;UBERON:0006238!2.65e-07!69;UBERON:0000073!2.72e-07!94;UBERON:0001016!2.72e-07!94;UBERON:0002780!3.74e-07!41;UBERON:0001890!3.74e-07!41;UBERON:0006240!3.74e-07!41 | |ontology_enrichment_uberon=UBERON:0007023!6.22e-18!115;UBERON:0000062!1.15e-11!511;UBERON:0001049!2.98e-10!57;UBERON:0005068!2.98e-10!57;UBERON:0006241!2.98e-10!57;UBERON:0007135!2.98e-10!57;UBERON:0001017!3.99e-08!82;UBERON:0000468!4.98e-08!659;UBERON:0002616!6.85e-08!59;UBERON:0001869!8.08e-08!32;UBERON:0001893!8.88e-08!34;UBERON:0002020!1.13e-07!34;UBERON:0003528!1.13e-07!34;UBERON:0003080!1.32e-07!42;UBERON:0000480!1.42e-07!626;UBERON:0005743!1.74e-07!86;UBERON:0002791!1.80e-07!33;UBERON:0000467!1.99e-07!625;UBERON:0000955!2.65e-07!69;UBERON:0006238!2.65e-07!69;UBERON:0000073!2.72e-07!94;UBERON:0001016!2.72e-07!94;UBERON:0002780!3.74e-07!41;UBERON:0001890!3.74e-07!41;UBERON:0006240!3.74e-07!41 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.15e-17,114;UBERON:0011216,7.53e-10,223;UBERON:0001049,1.30e-09,56;UBERON:0005068,1.30e-09,56;UBERON:0006241,1.30e-09,56;UBERON:0007135,1.30e-09,56;UBERON:0000073,1.70e-08,53;UBERON:0002616,1.70e-08,53;UBERON:0001869,9.71e-08,32;UBERON:0001893,1.06e-07,34;UBERON:0003528,1.35e-07,34;UBERON:0002020,1.35e-07,34;UBERON:0001017,1.55e-07,81;UBERON:0002791,3.05e-07,32;UBERON:0001016,3.54e-07,89;UBERON:0002780,5.57e-07,41;UBERON:0001890,5.57e-07,41;UBERON:0003080,5.57e-07,41;UBERON:0006240,5.57e-07,41;UBERON:0000955,9.50e-07,68;UBERON:0006238,9.50e-07,68 | |||
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| ||
|short_description=p5@RNF19A | |short_description=p5@RNF19A | ||
}} | }} |
Latest revision as of 19:21, 24 September 2015
Short description: | p5@RNF19A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RNF19A_5end |
Coexpression cluster: | NA |
Association with transcript: | -73bp_to_ENST00000523481_5end |
EntrezGene: | RNF19A |
HGNC: | 13432 |
UniProt: | E5RJH6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.15e-17 | 114 |
organ system subdivision | 7.53e-10 | 223 |
neural tube | 1.30e-09 | 56 |
neural rod | 1.30e-09 | 56 |
future spinal cord | 1.30e-09 | 56 |
neural keel | 1.30e-09 | 56 |
regional part of nervous system | 1.70e-08 | 53 |
regional part of brain | 1.70e-08 | 53 |
cerebral hemisphere | 9.71e-08 | 32 |
telencephalon | 1.06e-07 | 34 |
brain grey matter | 1.35e-07 | 34 |
gray matter | 1.35e-07 | 34 |
central nervous system | 1.55e-07 | 81 |
regional part of telencephalon | 3.05e-07 | 32 |
nervous system | 3.54e-07 | 89 |
regional part of forebrain | 5.57e-07 | 41 |
forebrain | 5.57e-07 | 41 |
anterior neural tube | 5.57e-07 | 41 |
future forebrain | 5.57e-07 | 41 |
brain | 9.50e-07 | 68 |
future brain | 9.50e-07 | 68 |