FFCP PHASE1:Hg19::chr12:75603643..75603652,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3747 | |EntrezGene=3747 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6234 | |HGNC=6234 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000549446_5end | |association_with_transcript=0bp_to_ENST00000549446_5end | ||
|cluster_id=chr12:75603643..75603652,- | |||
|coexpression_cluster_id=C3331 | |coexpression_cluster_id=C3331 | ||
|description=CAGE_peak_19_at_KCNC2_5end | |description=CAGE_peak_19_at_KCNC2_5end | ||
|id=chr12:75603643..75603652,- | |id=chr12:75603643..75603652,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!6.91e-59!34;UBERON:0001049!6.32e-57!57;UBERON:0005068!6.32e-57!57;UBERON:0006241!6.32e-57!57;UBERON:0007135!6.32e-57!57;UBERON:0001869!6.43e-56!32;UBERON:0002619!3.07e-55!22;UBERON:0002791!7.46e-54!33;UBERON:0001950!2.10e-52!20;UBERON:0002020!2.72e-52!34;UBERON:0003528!2.72e-52!34;UBERON:0005743!6.26e-51!86;UBERON:0000955!2.51e-50!69;UBERON:0006238!2.51e-50!69;UBERON:0002616!4.46e-50!59;UBERON:0001017!1.53e-49!82;UBERON:0000956!1.47e-48!25;UBERON:0000203!1.47e-48!25;UBERON:0002780!1.73e-48!41;UBERON:0001890!1.73e-48!41;UBERON:0006240!1.73e-48!41;UBERON:0003080!2.80e-47!42;UBERON:0000073!8.90e-46!94;UBERON:0001016!8.90e-46!94;UBERON:0003075!1.55e-43!86;UBERON:0007284!1.55e-43!86;UBERON:0002346!2.00e-41!90;UBERON:0007023!4.51e-41!115;UBERON:0003056!2.09e-35!61;UBERON:0000033!8.14e-32!123;UBERON:0000153!3.81e-30!129;UBERON:0007811!3.81e-30!129;UBERON:0000200!2.08e-28!6;UBERON:0004121!9.17e-24!169;UBERON:0000924!4.08e-23!173;UBERON:0006601!4.08e-23!173;UBERON:0001871!3.30e-21!7;UBERON:0002771!6.66e-21!3;UBERON:0000025!2.55e-15!194;UBERON:0002298!1.47e-13!8;UBERON:0002021!3.86e-13!5;UBERON:0001872!8.33e-13!5;UBERON:0000349!1.06e-12!5;UBERON:0000064!9.39e-12!219;UBERON:0004111!1.88e-11!241;UBERON:0003076!6.65e-11!15;UBERON:0003057!6.65e-11!15;UBERON:0000988!4.58e-10!3;UBERON:0000477!5.56e-10!286;UBERON:0000483!7.60e-10!309;UBERON:0000119!1.05e-09!312;UBERON:0001896!1.17e-09!3;UBERON:0005290!1.17e-09!3;UBERON:0010096!1.17e-09!3;UBERON:0000475!1.79e-09!365;UBERON:0004733!4.33e-09!12;UBERON:0002028!4.33e-09!12;UBERON:0007277!4.33e-09!12;UBERON:0002902!2.04e-08!1;UBERON:0009899!2.04e-08!1;UBERON:0004732!2.13e-08!13;UBERON:0007190!2.19e-08!1;UBERON:0002581!2.52e-08!1;UBERON:0002022!2.71e-08!1;UBERON:0003112!3.58e-08!1;UBERON:0000032!3.58e-08!1;UBERON:0005253!3.58e-08!1;UBERON:0003128!3.58e-08!1;UBERON:0002241!3.58e-08!1;UBERON:0001703!3.58e-08!1;UBERON:0004761!3.58e-08!1;UBERON:0009617!3.58e-08!1;UBERON:0001882!6.63e-08!1;UBERON:0005403!6.63e-08!1;UBERON:0001874!9.29e-08!1;UBERON:0002336!9.94e-08!1;UBERON:0001018!9.94e-08!1;UBERON:0002473!9.94e-08!1;UBERON:0005340!9.94e-08!1;UBERON:0002316!9.94e-08!1;UBERON:0003544!9.94e-08!1;UBERON:0001020!9.94e-08!1;UBERON:0005970!9.94e-08!1;UBERON:0002437!9.94e-08!1;UBERON:0000369!2.00e-07!4;UBERON:0002435!2.00e-07!4;UBERON:0000204!2.00e-07!4;UBERON:0010082!2.00e-07!4;UBERON:0002420!3.35e-07!9;UBERON:0007245!3.35e-07!9;UBERON:0010009!3.35e-07!9;UBERON:0010011!3.35e-07!9;UBERON:0000454!3.35e-07!9;UBERON:0002308!4.72e-07!9;UBERON:0000125!4.72e-07!9 | |ontology_enrichment_uberon=UBERON:0001893!6.91e-59!34;UBERON:0001049!6.32e-57!57;UBERON:0005068!6.32e-57!57;UBERON:0006241!6.32e-57!57;UBERON:0007135!6.32e-57!57;UBERON:0001869!6.43e-56!32;UBERON:0002619!3.07e-55!22;UBERON:0002791!7.46e-54!33;UBERON:0001950!2.10e-52!20;UBERON:0002020!2.72e-52!34;UBERON:0003528!2.72e-52!34;UBERON:0005743!6.26e-51!86;UBERON:0000955!2.51e-50!69;UBERON:0006238!2.51e-50!69;UBERON:0002616!4.46e-50!59;UBERON:0001017!1.53e-49!82;UBERON:0000956!1.47e-48!25;UBERON:0000203!1.47e-48!25;UBERON:0002780!1.73e-48!41;UBERON:0001890!1.73e-48!41;UBERON:0006240!1.73e-48!41;UBERON:0003080!2.80e-47!42;UBERON:0000073!8.90e-46!94;UBERON:0001016!8.90e-46!94;UBERON:0003075!1.55e-43!86;UBERON:0007284!1.55e-43!86;UBERON:0002346!2.00e-41!90;UBERON:0007023!4.51e-41!115;UBERON:0003056!2.09e-35!61;UBERON:0000033!8.14e-32!123;UBERON:0000153!3.81e-30!129;UBERON:0007811!3.81e-30!129;UBERON:0000200!2.08e-28!6;UBERON:0004121!9.17e-24!169;UBERON:0000924!4.08e-23!173;UBERON:0006601!4.08e-23!173;UBERON:0001871!3.30e-21!7;UBERON:0002771!6.66e-21!3;UBERON:0000025!2.55e-15!194;UBERON:0002298!1.47e-13!8;UBERON:0002021!3.86e-13!5;UBERON:0001872!8.33e-13!5;UBERON:0000349!1.06e-12!5;UBERON:0000064!9.39e-12!219;UBERON:0004111!1.88e-11!241;UBERON:0003076!6.65e-11!15;UBERON:0003057!6.65e-11!15;UBERON:0000988!4.58e-10!3;UBERON:0000477!5.56e-10!286;UBERON:0000483!7.60e-10!309;UBERON:0000119!1.05e-09!312;UBERON:0001896!1.17e-09!3;UBERON:0005290!1.17e-09!3;UBERON:0010096!1.17e-09!3;UBERON:0000475!1.79e-09!365;UBERON:0004733!4.33e-09!12;UBERON:0002028!4.33e-09!12;UBERON:0007277!4.33e-09!12;UBERON:0002902!2.04e-08!1;UBERON:0009899!2.04e-08!1;UBERON:0004732!2.13e-08!13;UBERON:0007190!2.19e-08!1;UBERON:0002581!2.52e-08!1;UBERON:0002022!2.71e-08!1;UBERON:0003112!3.58e-08!1;UBERON:0000032!3.58e-08!1;UBERON:0005253!3.58e-08!1;UBERON:0003128!3.58e-08!1;UBERON:0002241!3.58e-08!1;UBERON:0001703!3.58e-08!1;UBERON:0004761!3.58e-08!1;UBERON:0009617!3.58e-08!1;UBERON:0001882!6.63e-08!1;UBERON:0005403!6.63e-08!1;UBERON:0001874!9.29e-08!1;UBERON:0002336!9.94e-08!1;UBERON:0001018!9.94e-08!1;UBERON:0002473!9.94e-08!1;UBERON:0005340!9.94e-08!1;UBERON:0002316!9.94e-08!1;UBERON:0003544!9.94e-08!1;UBERON:0001020!9.94e-08!1;UBERON:0005970!9.94e-08!1;UBERON:0002437!9.94e-08!1;UBERON:0000369!2.00e-07!4;UBERON:0002435!2.00e-07!4;UBERON:0000204!2.00e-07!4;UBERON:0010082!2.00e-07!4;UBERON:0002420!3.35e-07!9;UBERON:0007245!3.35e-07!9;UBERON:0010009!3.35e-07!9;UBERON:0010011!3.35e-07!9;UBERON:0000454!3.35e-07!9;UBERON:0002308!4.72e-07!9;UBERON:0000125!4.72e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002902;3.99e-50;1!UBERON:0009899;3.99e-50;1!UBERON:0002021;3.31e-40;5!UBERON:0000988;9.45e-18;3!UBERON:0000955;4.62e-11;68!UBERON:0001950;1.77e-10;20!UBERON:0002619;1.17e-09;22!UBERON:0002298;1.44e-09;6!UBERON:0000956;1.15e-08;25!UBERON:0000203;1.15e-08;25!UBERON:0001893;3.69e-07;34!UBERON:0001017;7.45e-07;75!UBERON:0002680;8.37e-07;9!UBERON:0001895;8.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002902,6.58e-50,1;UBERON:0009899,6.58e-50,1;UBERON:0002021,4.05e-40,5;UBERON:0000988,8.00e-18,3;UBERON:0000955,3.68e-12,68;UBERON:0006238,3.68e-12,68;UBERON:0001950,1.86e-10,20;UBERON:0001017,2.17e-10,81;UBERON:0002619,1.22e-09,22;UBERON:0002298,1.32e-09,6;UBERON:0001016,1.88e-09,89;UBERON:0000073,3.93e-09,53;UBERON:0002616,3.93e-09,53;UBERON:0001049,1.07e-08,56;UBERON:0005068,1.07e-08,56;UBERON:0006241,1.07e-08,56;UBERON:0007135,1.07e-08,56;UBERON:0000956,1.20e-08,25;UBERON:0000203,1.20e-08,25;UBERON:0007023,8.86e-08,114;UBERON:0002791,5.04e-07,32;UBERON:0001869,5.04e-07,32;UBERON:0002680,7.91e-07,9;UBERON:0001895,7.91e-07,9;UBERON:0010092,7.91e-07,9 | |||
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|short_description=p19@KCNC2 | |short_description=p19@KCNC2 | ||
}} | }} |
Latest revision as of 19:34, 24 September 2015
Short description: | p19@KCNC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_KCNC2_5end |
Coexpression cluster: | C3331_brain_occipital_paracentral_parietal_insula_postcentral_pons |
Association with transcript: | 0bp_to_ENST00000549446_5end |
EntrezGene: | KCNC2 |
HGNC: | 6234 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital pole | 6.58e-50 | 1 |
pole of cerebral hemisphere | 6.58e-50 | 1 |
occipital lobe | 4.05e-40 | 5 |
pons | 8.00e-18 | 3 |
brain | 3.68e-12 | 68 |
future brain | 3.68e-12 | 68 |
neocortex | 1.86e-10 | 20 |
central nervous system | 2.17e-10 | 81 |
regional part of cerebral cortex | 1.22e-09 | 22 |
brainstem | 1.32e-09 | 6 |
nervous system | 1.88e-09 | 89 |
regional part of nervous system | 3.93e-09 | 53 |
regional part of brain | 3.93e-09 | 53 |
neural tube | 1.07e-08 | 56 |
neural rod | 1.07e-08 | 56 |
future spinal cord | 1.07e-08 | 56 |
neural keel | 1.07e-08 | 56 |
cerebral cortex | 1.20e-08 | 25 |
pallium | 1.20e-08 | 25 |
adult organism | 8.86e-08 | 114 |
regional part of telencephalon | 5.04e-07 | 32 |
cerebral hemisphere | 5.04e-07 | 32 |
regional part of metencephalon | 7.91e-07 | 9 |
metencephalon | 7.91e-07 | 9 |
future metencephalon | 7.91e-07 | 9 |