FFCP PHASE1:Hg19::chr5:135385202..135385212,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7045 | |EntrezGene=7045 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11771 | |HGNC=11771 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000514554_5end | |association_with_transcript=0bp_to_ENST00000514554_5end | ||
|cluster_id=chr5:135385202..135385212,+ | |||
|coexpression_cluster_id=C295 | |||
|description=CAGE_peak_21_at_TGFBI_5end | |description=CAGE_peak_21_at_TGFBI_5end | ||
|id=chr5:135385202..135385212,+ | |id=chr5:135385202..135385212,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.01e-27!180;CL:0002371!1.79e-16!591;CL:0000680!7.02e-15!57;CL:0000056!7.02e-15!57;CL:0000355!7.02e-15!57;CL:0000057!1.14e-14!75;CL:0000144!2.31e-14!625;CL:0000048!3.02e-14!430;CL:0000548!5.87e-14!679;CL:0000004!5.87e-14!679;CL:0000255!5.87e-14!679;CL:0000723!1.07e-13!436;CL:0000012!1.51e-13!682;CL:0000034!3.30e-13!444;CL:0000187!4.01e-13!54;CL:0000183!1.39e-11!59;CL:0000393!1.82e-10!60;CL:0000211!1.82e-10!60;CL:0000359!3.18e-10!32;CL:0000192!7.00e-10!42;CL:0000514!7.00e-10!42;CL:0000003!3.04e-09!722;CL:0002334!1.43e-08!12;CL:0000327!9.04e-07!14 | |ontology_enrichment_celltype=CL:0000055!2.01e-27!180;CL:0002371!1.79e-16!591;CL:0000680!7.02e-15!57;CL:0000056!7.02e-15!57;CL:0000355!7.02e-15!57;CL:0000057!1.14e-14!75;CL:0000144!2.31e-14!625;CL:0000048!3.02e-14!430;CL:0000548!5.87e-14!679;CL:0000004!5.87e-14!679;CL:0000255!5.87e-14!679;CL:0000723!1.07e-13!436;CL:0000012!1.51e-13!682;CL:0000034!3.30e-13!444;CL:0000187!4.01e-13!54;CL:0000183!1.39e-11!59;CL:0000393!1.82e-10!60;CL:0000211!1.82e-10!60;CL:0000359!3.18e-10!32;CL:0000192!7.00e-10!42;CL:0000514!7.00e-10!42;CL:0000003!3.04e-09!722;CL:0002334!1.43e-08!12;CL:0000327!9.04e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000359;6.75e-13;32!CL:0000153;1.38e-12;9!CL:0000447;1.38e-12;9!CL:0000327;1.98e-11;15!CL:0000138;4.80e-10;6!CL:0000499;7.19e-10;28!CL:0002595;1.86e-08;5!CL:0002580;2.65e-08;3!CL:0000192;4.15e-08;43!CL:0002570;9.14e-08;8!CL:0002334;5.76e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.19e-13,32;CL:0000153,8.58e-13,9;CL:0000447,8.58e-13,9;CL:0000057,4.09e-12,76;CL:0000327,1.42e-11,15;CL:0000680,1.57e-11,58;CL:0000056,1.57e-11,58;CL:0000355,1.57e-11,58;CL:0000048,3.45e-11,427;CL:0000723,8.37e-11,433;CL:0000192,1.53e-10,43;CL:0000514,1.53e-10,43;CL:0000034,2.62e-10,441;CL:0000058,3.93e-10,6;CL:0000138,3.93e-10,6;CL:0000499,6.24e-10,28;CL:0000187,1.01e-09,55;CL:0002580,1.40e-08,3;CL:0002595,2.00e-08,5;CL:0000393,2.45e-08,61;CL:0000211,2.45e-08,61;CL:0002570,1.18e-07,8;CL:0002334,4.22e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;4.15e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!6.50e-13!61;UBERON:0002036!6.50e-13!61;UBERON:0003082!6.50e-13!61;UBERON:0000486!2.21e-12!82;UBERON:0002204!3.45e-12!167;UBERON:0002385!4.87e-12!63;UBERON:0001015!4.87e-12!63;UBERON:0000383!4.87e-12!63;UBERON:0004290!1.18e-10!70;UBERON:0000914!1.35e-10!83;UBERON:0002329!1.35e-10!83;UBERON:0003077!1.35e-10!83;UBERON:0003059!1.35e-10!83;UBERON:0007282!1.35e-10!83;UBERON:0009618!1.35e-10!83;UBERON:0007285!1.35e-10!83;UBERON:0005256!3.61e-08!143;UBERON:0001637!1.01e-07!42;UBERON:0003509!1.01e-07!42;UBERON:0004572!1.01e-07!42;UBERON:0002384!3.95e-07!375;UBERON:0002100!9.44e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.46e-12;33!UBERON:0004571;2.46e-12;33!UBERON:0001637;3.72e-09;42!UBERON:0003509;3.72e-09;42!UBERON:0004572;3.72e-09;42!UBERON:0003834;1.86e-08;5!UBERON:0001533;1.86e-08;5!UBERON:0001013;1.17e-07;14!UBERON:0004457;4.34e-07;9!UBERON:0000042;4.34e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,3.68e-13,33;UBERON:0004571,3.68e-13,33;UBERON:0001637,2.47e-12,42;UBERON:0003509,2.47e-12,42;UBERON:0004572,2.47e-12,42;UBERON:0001134,1.86e-10,62;UBERON:0002036,1.86e-10,62;UBERON:0003082,1.86e-10,62;UBERON:0002385,5.66e-10,64;UBERON:0001015,5.66e-10,64;UBERON:0000383,5.66e-10,64;UBERON:0002329,1.66e-08,71;UBERON:0003059,1.66e-08,71;UBERON:0007282,1.66e-08,71;UBERON:0004290,1.66e-08,71;UBERON:0009618,1.66e-08,71;UBERON:0000486,1.84e-08,83;UBERON:0003834,2.00e-08,5;UBERON:0001533,2.00e-08,5;UBERON:0003077,2.54e-08,72;UBERON:0007285,2.54e-08,72;UBERON:0004872,3.44e-08,83;UBERON:0007524,3.85e-08,73;UBERON:0001013,1.13e-07,14;UBERON:0007500,1.38e-07,59;UBERON:0001981,1.38e-07,59;UBERON:0004537,1.38e-07,59;UBERON:0006965,1.38e-07,59;UBERON:0007503,2.56e-07,78;UBERON:0000055,5.24e-07,68 | |||
|phase1_expression=1.09007027562334,1.92690471501885,0.563817616383885,0,4.02264984984559,1.74467704820074,0,0,0,1.47440361900905,0,1.09220686065086,0.527533956456907,0,0.662794751455832,2.01697543935533,3.61616716814386,2.92124036154949,2.43966399395253,0.861847406537515,1.02000345622126,0.626909442956176,0,1.23186982565596,0.251085279189606,0,0,0,0,0.383829398097213,0,0,0.30120591877825,0.369754010166788,0,0,0,0.553995408531877,0.401088894940283,0,0.223915474239924,0,0.257575567634187,0.290796477559129,0,0.242584061187816,0.232429036905685,0,0,0.863077176966451,0.512321413058201,0.47296445977717,0,0,0,0.564727018627814,0,0.224723484445085,0,0,0.639337125799041,0.329851300186716,0.199463657621632,0.852449501065388,0,0,0,0,1.5644487552606,0.65156653411535,0,0.368277635987565,0,0.211255286311942,0.212604299965044,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0,1.0843174571537,1.50401373190767,2.89693037921647,1.5905718941022,4.37971383272372,0.0945348171640679,0.665188192387692,0.527008714158756,0,0,0.370784442784429,0.324547393654683,0.696518949197069,0.930705723632056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,1.01304409331664,0.264818361626438,1.43418310374407,0.709336764396714,1.12135520028461,0,1.48000529050296,0,0.538842688278752,0,0,1.15235184896,0.234321431833797,0,0,0,0,0.323745888736263,0.280901613404497,0.204154171254893,0,0.103325781175765,0,0.741800787835671,0,2.15585442544872,0,0,0,0,0.612975591598039,0.751190294532984,0.340296549480063,1.97328599257748,0.640672166455702,0.423863802319124,2.70081986475962,0.515262646192195,2.83404594050192,0.930584281657949,1.85653965465393,2.53336213419116,2.01947019395292,0.184099797284599,0.646584227275248,6.03516307278244,2.01504196455281,0,0,0.545492241181669,0.286804595389004,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0.237270619111097,0,0.196221465125346,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0.686271241194102,0.219500570817251,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0.984868024349589,0,0.445893486866185,0,1.84780341018745,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.07333828582095,0.258543431515556,0,3.381211010224,0.26593811658487,0,0,0,0.266422179016099,0.57191197463259,0.542621605391443,0.823240336780769,0,2.13235169245527,0,0.301439377059586,0,0,0,0.502257091432126,2.10833939483032,0.958499421966331,0,0,1.44781306667579,0.61642896765115,2.68591444859843,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0,0.415941723061614,0.535286966391485,0.157702415033935,0,0.300946099727719,0,2.0694614258501,0.664225598535437,1.10621501125022,0.0868836144680828,0,0.343143423810856,0,0.215714200818617,0.106727557803444,0,0,1.5119514666484,2.23297027036899,1.99500565274481,3.64858122762996,2.17836553734692,0.511707249066704,2.41280881715411,1.48418066444991,0.925258162815933,0.532685175939381,0.164254312027618,0.519254429183621,0.232420756919918,0,0.40101294060657,0,0.229628896329213,0.364182336013434,1.31124414959424,0.451199612907412,0.15403067420883,0,0,0.527758144464379,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.616194468458578,0.921022048356777,0.413509717453592,0.966782203814463,1.30515024522806,0.426133137080504,0.178064071293475,0.165284915360978,0,0.127612712494584,0.30347334256665,0.464845549297286,2.20368642781448,0,0.924100740528266,0,0,2.40921484835096,1.14499909393593,0.372158369359667,0.316379424718726,0,0,0.42793898803392,0,1.56989728039846,0,0,0.589062011728432,0,0,1.68503382495592,0.48763373908959,0.243713489631284,2.11300293513511,0,1.27264888758341,1.13008116620243,2.75682671773062,1.32687795048244,3.06915619677634,0.578775534266688,0.655894752046633,1.01455188481352,0.92947049429925,0.845086807596724,0.143411352204052,0,0.35667105148125,0,4.64436797654861,1.64647446479951,0,0.349934720244983,0.0962221127255121,0.670302275535787,0,0,0.86101074534246,0,0.886860307073351,0.459446800413919,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0.622079175323615,0.0898683511473268,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0.137041924646751,0.794858446811959,0,0,0.240476460754601,0,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,0.429765441419957,0,0,0,0,0,0,0.223171457441873,0,1.44119953416961,0,0,0,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0.0524545881349981,0.105600336519406,2.86859742932552,0,0.714695326373367,0,0,0.542999601753713,3.45688596480507,1.63293680054705,0,0,1.363104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| ||
|short_description=p21@TGFBI | |short_description=p21@TGFBI | ||
}} | }} |
Latest revision as of 19:35, 24 September 2015
Short description: | p21@TGFBI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_TGFBI_5end |
Coexpression cluster: | C295_Fibroblast_Smooth_Myoblast_Chondrocyte_hepatic_Synoviocyte_Preadipocyte |
Association with transcript: | 0bp_to_ENST00000514554_5end |
EntrezGene: | TGFBI |
HGNC: | 11771 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.19e-13 | 32 |
GAG secreting cell | 8.58e-13 | 9 |
carbohydrate secreting cell | 8.58e-13 | 9 |
fibroblast | 4.09e-12 | 76 |
extracellular matrix secreting cell | 1.42e-11 | 15 |
muscle precursor cell | 1.57e-11 | 58 |
myoblast | 1.57e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.57e-11 | 58 |
multi fate stem cell | 3.45e-11 | 427 |
somatic stem cell | 8.37e-11 | 433 |
smooth muscle cell | 1.53e-10 | 43 |
smooth muscle myoblast | 1.53e-10 | 43 |
stem cell | 2.62e-10 | 441 |
chondroblast | 3.93e-10 | 6 |
chondrocyte | 3.93e-10 | 6 |
stromal cell | 6.24e-10 | 28 |
muscle cell | 1.01e-09 | 55 |
preadipocyte of the breast | 1.40e-08 | 3 |
smooth muscle cell of the subclavian artery | 2.00e-08 | 5 |
electrically responsive cell | 2.45e-08 | 61 |
electrically active cell | 2.45e-08 | 61 |
mesenchymal stem cell of adipose | 1.18e-07 | 8 |
preadipocyte | 4.22e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
systemic artery | 3.68e-13 | 33 |
systemic arterial system | 3.68e-13 | 33 |
artery | 2.47e-12 | 42 |
arterial blood vessel | 2.47e-12 | 42 |
arterial system | 2.47e-12 | 42 |
skeletal muscle tissue | 1.86e-10 | 62 |
striated muscle tissue | 1.86e-10 | 62 |
myotome | 1.86e-10 | 62 |
muscle tissue | 5.66e-10 | 64 |
musculature | 5.66e-10 | 64 |
musculature of body | 5.66e-10 | 64 |
somite | 1.66e-08 | 71 |
presomitic mesoderm | 1.66e-08 | 71 |
presumptive segmental plate | 1.66e-08 | 71 |
dermomyotome | 1.66e-08 | 71 |
trunk paraxial mesoderm | 1.66e-08 | 71 |
multilaminar epithelium | 1.84e-08 | 83 |
thoracic segment blood vessel | 2.00e-08 | 5 |
subclavian artery | 2.00e-08 | 5 |
paraxial mesoderm | 2.54e-08 | 72 |
presumptive paraxial mesoderm | 2.54e-08 | 72 |
splanchnic layer of lateral plate mesoderm | 3.44e-08 | 83 |
dense mesenchyme tissue | 3.85e-08 | 73 |
adipose tissue | 1.13e-07 | 14 |
epithelial tube open at both ends | 1.38e-07 | 59 |
blood vessel | 1.38e-07 | 59 |
blood vasculature | 1.38e-07 | 59 |
vascular cord | 1.38e-07 | 59 |
epithelial vesicle | 2.56e-07 | 78 |
vessel | 5.24e-07 | 68 |