FFCP PHASE1:Hg19::chr5:135391432..135391456,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:135391432..135391456,+
|short_description=p18@TGFBI
|description=CAGE_peak_18_at_TGFBI_5end
|association_with_transcript=244bp_to_ENST00000514242_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7045 | |EntrezGene=7045 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11771 | |HGNC=11771 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=244bp_to_ENST00000514242_5end | |||
|cluster_id=chr5:135391432..135391456,+ | |||
|coexpression_cluster_id=C295 | |||
|description=CAGE_peak_18_at_TGFBI_5end | |||
|id=chr5:135391432..135391456,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.10e-26!180;CL:0002371!3.60e-21!591;CL:0000048!5.14e-19!430;CL:0000144!9.36e-19!625;CL:0000723!2.75e-18!436;CL:0000034!7.67e-17!444;CL:0000680!2.45e-15!57;CL:0000056!2.45e-15!57;CL:0000355!2.45e-15!57;CL:0000548!2.18e-14!679;CL:0000004!2.18e-14!679;CL:0000255!2.18e-14!679;CL:0000057!2.93e-14!75;CL:0000012!6.05e-14!682;CL:0000187!1.73e-13!54;CL:0000183!8.47e-12!59;CL:0000192!3.11e-11!42;CL:0000514!3.11e-11!42;CL:0000393!1.09e-10!60;CL:0000211!1.09e-10!60;CL:0002334!1.30e-09!12;CL:0002320!1.61e-09!365;CL:0000359!2.74e-09!32;CL:0000134!2.81e-09!358;CL:0000003!7.46e-09!722;CL:0000219!1.27e-08!390;CL:0000499!1.92e-08!27;CL:0002620!6.46e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002334;6.86e-16;12!CL:0000359;1.72e-11;32!CL:0000499;6.11e-08;28!CL:0000192;1.53e-07;43!CL:0000138;1.85e-07;6!CL:0002570;2.30e-07;8!CL:0000187;2.54e-07;55!CL:0000153;6.41e-07;9!CL:0000447;6.41e-07;9!CL:0002580;9.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.02e-15,12;CL:0000680,1.21e-14,58;CL:0000056,1.21e-14,58;CL:0000355,1.21e-14,58;CL:0000048,5.13e-14,427;CL:0000057,1.22e-13,76;CL:0000723,1.78e-13,433;CL:0000034,8.78e-13,441;CL:0000359,1.91e-12,32;CL:0000187,6.90e-12,55;CL:0000192,2.14e-10,43;CL:0000514,2.14e-10,43;CL:0000393,4.68e-10,61;CL:0000211,4.68e-10,61;CL:0000499,5.84e-08,28;CL:0002570,1.11e-07,8;CL:0000058,2.69e-07,6;CL:0000138,2.69e-07,6;CL:0000153,8.60e-07,9;CL:0000447,8.60e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000355;1.32e-07;58!CL:0000514;1.53e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.63e-13!167;UBERON:0001134!2.94e-13!61;UBERON:0002036!2.94e-13!61;UBERON:0003082!2.94e-13!61;UBERON:0000486!1.75e-12!82;UBERON:0002385!2.46e-12!63;UBERON:0001015!2.46e-12!63;UBERON:0000383!2.46e-12!63;UBERON:0004290!9.14e-12!70;UBERON:0000914!1.38e-11!83;UBERON:0002329!1.38e-11!83;UBERON:0003077!1.38e-11!83;UBERON:0003059!1.38e-11!83;UBERON:0007282!1.38e-11!83;UBERON:0009618!1.38e-11!83;UBERON:0007285!1.38e-11!83;UBERON:0001637!3.67e-10!42;UBERON:0003509!3.67e-10!42;UBERON:0004572!3.67e-10!42;UBERON:0002384!1.65e-09!375;UBERON:0004573!2.57e-09!33;UBERON:0004571!2.57e-09!33;UBERON:0000926!6.35e-09!448;UBERON:0004120!6.35e-09!448;UBERON:0006603!6.35e-09!448;UBERON:0005256!3.38e-08!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.95e-10;6!UBERON:0002358;3.95e-10;6!UBERON:0003684;3.95e-10;6!UBERON:0001178;3.95e-10;6!UBERON:0004457;5.58e-09;9!UBERON:0000042;5.58e-09;9!UBERON:0004573;1.54e-08;33!UBERON:0004571;1.54e-08;33!UBERON:0001637;9.60e-08;42!UBERON:0003509;9.60e-08;42!UBERON:0004572;9.60e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.48e-13,62;UBERON:0002036,3.48e-13,62;UBERON:0003082,3.48e-13,62;UBERON:0002385,1.58e-12,64;UBERON:0001015,1.58e-12,64;UBERON:0000383,1.58e-12,64;UBERON:0001637,1.18e-10,42;UBERON:0003509,1.18e-10,42;UBERON:0004572,1.18e-10,42;UBERON:0002329,1.53e-10,71;UBERON:0003059,1.53e-10,71;UBERON:0007282,1.53e-10,71;UBERON:0004290,1.53e-10,71;UBERON:0009618,1.53e-10,71;UBERON:0003077,2.71e-10,72;UBERON:0007285,2.71e-10,72;UBERON:0007524,4.74e-10,73;UBERON:0000486,9.94e-10,83;UBERON:0003688,1.19e-09,6;UBERON:0002358,1.19e-09,6;UBERON:0003684,1.19e-09,6;UBERON:0001178,1.19e-09,6;UBERON:0004573,2.52e-09,33;UBERON:0004571,2.52e-09,33;UBERON:0007503,6.10e-09,78;UBERON:0001013,6.62e-07,14 | |||
|phase1_expression=1.63510541343501,3.42560838225573,1.12763523276777,2.00146596706261,2.23480547213644,1.74467704820074,0,0.631719873426831,0,0.491467873003018,0,1.52908960491121,0.527533956456907,0.123766352960047,0.331397375727916,6.05092631806598,1.80808358407193,6.57279081348636,5.36726078669558,1.72369481307503,2.04000691244253,3.44800193625897,0.286235987131057,0.958120975510189,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.601633342410425,0.217010870715852,0,0.32389366601898,0,0.436194716338694,0.755751887377619,0.727752183563449,0.232429036905685,0,0.309706370895104,0.575384784644301,0.256160706529101,0.236482229888585,0,0,1.35426486594342,0.188242339542605,0.272906150057846,0.674170453335254,0.306083892370903,0,0.639337125799041,0.329851300186716,0.797854630486527,0.426224750532694,0.580418477257168,0,0,0.502497330513487,0.521482918420201,0.434377689410233,0.605399502633369,0,0,0.211255286311942,0.212604299965044,0.419317291016752,0.112328631146495,0,0.32145117339416,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0,1.0843174571537,3.00802746381534,4.49024208778554,1.5905718941022,6.32625331393427,0.661743720148475,3.76939975686359,1.05401742831751,0,0,0.370784442784429,0.97364218096405,0.696518949197069,1.99436940778298,0.715471872916026,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,3.97577561356255,1.13967460498122,0.397227542439656,2.86836620748814,0.709336764396714,0.560677600142307,2.1349799145941,3.20667812942308,0,0,0.817309515567294,0.605429710579726,1.15235184896,0.234321431833797,0,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0,0,0.103325781175765,0,0,0.910161361938026,0.718618141816238,0,0,0,0,0.30648779579902,0.45071417671979,0,2.87023417102179,1.92201649936711,1.69545520927649,5.40163972951924,0.92747276314595,3.34932702059318,0.744467425326359,5.23206629947925,2.72823614451356,2.01947019395292,0.460249493211497,0.646584227275248,6.39017266529906,2.51880245569101,0.339121184620975,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0.721879481669586,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0.8231480226628,2.94017422771084,0,0,0,0,0,0.686271241194102,0.219500570817251,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0.984868024349589,0.234004265139238,1.18904929830983,0,0.839910640994298,0.141775097242386,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0.300343057843917,0,0.112131084345361,0.87192013766656,0,0.129271715757778,3.57656445851882,3.381211010224,0.531876233169741,1.04007436911366,0,0,0,0.714889968290738,0.542621605391443,1.64648067356154,0.977208552881205,2.13235169245527,3.16780749173372,0,0,0.099972991182057,1.2162378064119,0.502257091432126,0,0.479249710983165,2.29723871668228,0,2.17171960001369,2.05476322550383,2.68591444859843,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0,2.07970861530807,1.42743191037729,0.157702415033935,0,0.300946099727719,0,1.03473071292505,0.664225598535437,2.21243002250044,0.260650843404249,0.391602314925481,0,0,0,0,0,0,1.81434175997808,3.2254015016441,3.52962538562544,5.89386198309454,3.07533958213682,1.02341449813341,3.69964018630297,2.96836132889982,1.3878872442239,1.59805552781814,0.246381468041427,3.63478100428535,1.16210378459959,0.120859449591622,1.00253235151642,0.0920809889358963,0.918515585316854,2.00300284807389,1.83574180943194,0,0.0770153371044148,0.784349769176855,1.46139224653261,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.386682873168488,1.07834031980251,1.84204409671355,0.827019434907183,1.6113036730241,1.30515024522806,0.681813019328807,0.267096106940212,0.165284915360978,0.384380134730212,0.127612712494584,0.2023155617111,0.464845549297286,4.40737285562896,0.6970372701606,0,0,0,1.29726953372744,1.28812398067792,0,0,0.190630193923825,0,0,0.95460974377781,1.56989728039846,0.359744915166629,3.84351841630477,0.942499218765491,0.404364963146632,1.58510321173008,2.10629228119491,0.48763373908959,0.731140468893853,5.28250733783777,0.545999645631943,1.55545975149084,0,1.65409603063837,1.99031692572366,2.19225442626881,0,0.655894752046633,1.21746226177622,1.8589409885985,1.40847801266121,0,0,1.78335525740625,0.354761064070598,8.44430541190656,0.987884678879706,0,0,0,0,1.08890984861323,0,0.86101074534246,0,1.7737206141467,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.593929361665277,0,0,0,0,0,0,0.19924798825107,0,0,0.306806047506464,0,3.42143546427988,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0.137041924646751,0.596143835108969,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0.305994652908965,0,0,0,0,0,0,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| ||
|short_description=p18@TGFBI | |||
}} | }} |
Latest revision as of 19:45, 24 September 2015
Short description: | p18@TGFBI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_TGFBI_5end |
Coexpression cluster: | C295_Fibroblast_Smooth_Myoblast_Chondrocyte_hepatic_Synoviocyte_Preadipocyte |
Association with transcript: | 244bp_to_ENST00000514242_5end |
EntrezGene: | TGFBI |
HGNC: | 11771 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.02e-15 | 12 |
muscle precursor cell | 1.21e-14 | 58 |
myoblast | 1.21e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.21e-14 | 58 |
multi fate stem cell | 5.13e-14 | 427 |
fibroblast | 1.22e-13 | 76 |
somatic stem cell | 1.78e-13 | 433 |
stem cell | 8.78e-13 | 441 |
vascular associated smooth muscle cell | 1.91e-12 | 32 |
muscle cell | 6.90e-12 | 55 |
smooth muscle cell | 2.14e-10 | 43 |
smooth muscle myoblast | 2.14e-10 | 43 |
electrically responsive cell | 4.68e-10 | 61 |
electrically active cell | 4.68e-10 | 61 |
stromal cell | 5.84e-08 | 28 |
mesenchymal stem cell of adipose | 1.11e-07 | 8 |
chondroblast | 2.69e-07 | 6 |
chondrocyte | 2.69e-07 | 6 |
GAG secreting cell | 8.60e-07 | 9 |
carbohydrate secreting cell | 8.60e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 3.48e-13 | 62 |
striated muscle tissue | 3.48e-13 | 62 |
myotome | 3.48e-13 | 62 |
muscle tissue | 1.58e-12 | 64 |
musculature | 1.58e-12 | 64 |
musculature of body | 1.58e-12 | 64 |
artery | 1.18e-10 | 42 |
arterial blood vessel | 1.18e-10 | 42 |
arterial system | 1.18e-10 | 42 |
somite | 1.53e-10 | 71 |
presomitic mesoderm | 1.53e-10 | 71 |
presumptive segmental plate | 1.53e-10 | 71 |
dermomyotome | 1.53e-10 | 71 |
trunk paraxial mesoderm | 1.53e-10 | 71 |
paraxial mesoderm | 2.71e-10 | 72 |
presumptive paraxial mesoderm | 2.71e-10 | 72 |
dense mesenchyme tissue | 4.74e-10 | 73 |
multilaminar epithelium | 9.94e-10 | 83 |
omentum | 1.19e-09 | 6 |
peritoneum | 1.19e-09 | 6 |
abdominal cavity | 1.19e-09 | 6 |
visceral peritoneum | 1.19e-09 | 6 |
systemic artery | 2.52e-09 | 33 |
systemic arterial system | 2.52e-09 | 33 |
epithelial vesicle | 6.10e-09 | 78 |
adipose tissue | 6.62e-07 | 14 |