FFCP PHASE1:Hg19::chr4:1164865..1164905,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr4:1164865..1164905,- to FFCP PHASE1:Hg19::chr4:1164865..1164905,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10417 | |EntrezGene=10417 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11253 | |HGNC=11253 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_ENST00000509697_5end | |||
|cluster_id=chr4:1164865..1164905,- | |||
|coexpression_cluster_id=C574 | |||
|description=CAGE_peak_4_at_SPON2_5end | |||
|id=chr4:1164865..1164905,- | |||
|ontology_enrichment_celltype=CL:0000057!4.49e-20!75;CL:0000055!6.03e-15!180;CL:0000048!9.47e-13!430;CL:0000723!3.36e-12!436;CL:0000034!1.43e-11!444;CL:0002320!1.07e-09!365;CL:0000134!3.69e-09!358;CL:0000136!4.94e-09!15;CL:0002620!6.55e-09!23;CL:0002334!7.19e-09!12;CL:0000219!1.25e-08!390;CL:0002371!5.67e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000134;1.36e-16;55!CL:0000048;2.92e-14;58!CL:0000723;3.59e-14;61!CL:0002334;1.08e-13;12!CL:0000034;2.98e-12;69!CL:0000136;2.81e-10;13!CL:0002559;1.13e-08;5!CL:0002570;1.74e-07;8!CL:0000349;2.07e-07;19!CL:0002615;5.81e-07;3!CL:0002504;6.57e-07;3!CL:1000279;6.57e-07;3!CL:1000280;6.57e-07;3!CL:0002622;6.57e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.00e-16,427;CL:0000723,3.87e-16,433;CL:0000034,5.23e-16,441;CL:0002334,8.80e-14,12;CL:0000136,5.07e-13,15;CL:0000134,2.58e-11,354;CL:0002320,2.95e-11,361;CL:0000219,1.44e-09,386;CL:0000057,3.78e-09,76;CL:0002559,9.74e-09,5;CL:0000349,1.65e-07,19;CL:0002570,2.14e-07,8;CL:0002615,5.89e-07,3;CL:0002504,6.60e-07,3;CL:1000279,6.60e-07,3;CL:1000280,6.60e-07,3;CL:0002622,6.60e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.83e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.52e-13;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.22e-13,14 | |||
|ontology_enrichment_uberon=UBERON:0002199!8.61e-12!45;UBERON:0002416!8.61e-12!45;UBERON:0003102!6.38e-11!95;UBERON:0002384!4.48e-09!375;UBERON:0002097!8.87e-09!40;UBERON:0001013!1.52e-08!14;UBERON:0000914!1.73e-08!83;UBERON:0002329!1.73e-08!83;UBERON:0003077!1.73e-08!83;UBERON:0003059!1.73e-08!83;UBERON:0007282!1.73e-08!83;UBERON:0009618!1.73e-08!83;UBERON:0007285!1.73e-08!83;UBERON:0005256!3.76e-08!143;UBERON:0002100!1.16e-07!216;UBERON:0000475!2.12e-07!365;UBERON:0004290!2.18e-07!70;UBERON:0004923!2.57e-07!57;UBERON:0002067!6.39e-07!9;UBERON:0004016!6.39e-07!9;UBERON:0010083!6.39e-07!9;UBERON:0003688!7.65e-07!6;UBERON:0002358!7.65e-07!6;UBERON:0003684!7.65e-07!6;UBERON:0001178!7.65e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;9.98e-12;6!UBERON:0002358;9.98e-12;6!UBERON:0003684;9.98e-12;6!UBERON:0001178;9.98e-12;6!UBERON:0001013;1.91e-10;14!UBERON:0004457;1.17e-09;9!UBERON:0000042;1.17e-09;9!UBERON:0002072;7.38e-09;5!UBERON:0002073;1.13e-08;5!UBERON:0000992;1.73e-07;13!UBERON:0002119;2.51e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.07e-11,6;UBERON:0002358,1.07e-11,6;UBERON:0003684,1.07e-11,6;UBERON:0001178,1.07e-11,6;UBERON:0001013,1.65e-10,14;UBERON:0002384,2.06e-10,371;UBERON:0002072,5.28e-09,5;UBERON:0002073,9.74e-09,5;UBERON:0005086,9.74e-09,5;UBERON:0002329,2.41e-08,71;UBERON:0003059,2.41e-08,71;UBERON:0007282,2.41e-08,71;UBERON:0004290,2.41e-08,71;UBERON:0009618,2.41e-08,71;UBERON:0003077,3.84e-08,72;UBERON:0007285,3.84e-08,72;UBERON:0000926,5.30e-08,315;UBERON:0004120,5.30e-08,315;UBERON:0006603,5.30e-08,315;UBERON:0007524,6.05e-08,73;UBERON:0004923,6.33e-08,66;UBERON:0007503,9.12e-08,78;UBERON:0005256,1.29e-07,122;UBERON:0000992,1.46e-07,13;UBERON:0002119,1.97e-07,4;UBERON:0000486,6.59e-07,83;UBERON:0004457,7.29e-07,12;UBERON:0000042,7.29e-07,12 | |||
|phase1_expression=16.1693757550795,26.5484649624819,13.9544860055011,13.009528785907,22.3480547213644,1.74467704820074,7.59899634504932,3.15859936713415,1.82829939739887,0.491467873003018,1.39560233594486,0,0.263766978228454,0.74259811776028,1.98838425436749,0,0,0,0.487932798790507,0.123121058076788,0.204000691244253,0,0,0,0.251085279189606,0,0,0,0.786728553697808,0,0.619264493264304,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0.651083453856419,0,0.301150238155546,0.127986611154418,0,0.236777252044017,0,0,0.534880391567015,0.289648807765598,0,2.01210257911091,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.26591592103773,0.715471872916026,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.860509862246441,0.354668382198357,0,0,0,1.24484414159907,0,0.163461903113459,0,1.15235184896,0.234321431833797,7.49184184392769,0.570471821544449,1.04614076386261,0.587172493218824,1.29498355494505,0.98315564691574,0.408308342509787,0.368502951935304,1.13658359293342,7.12801714369232,7.66527480763526,0.910161361938026,24.4330168217521,0.168336113954066,0.125118519871964,0,0.438977620880838,2.14541457059314,0.901428353439581,0,0.358779271377724,0.640672166455702,0.423863802319124,1.50045548042201,0.721367704669072,0.257640540045629,0.37223371266318,0.337552664482532,0.0974370051611986,0.252433774244115,0.184099797284599,2.10139873864455,0.355009592516614,0.302256294682921,0.169560592310488,0,0,0,0,0,0,0,0,0,1.56449532329816,11.5783368874719,1.38134921352481,2.3218396401599,12.271951188383,0.354920400119532,0.337169380156203,0.241011029883482,0.110293972732394,0,0.474541238222193,0.134831308160164,0.392442930250692,0,0,1.40241773803446,0.4115740113314,10.2906097969879,2.53510069643662,0.982827216677626,0.590789906681404,0,0,0,0.109750285408626,0,0,0,0.325808305310325,3.11980435583874,0,0,0,0,0,0,0,0,0,0.468008530278475,0.594524649154913,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0,1.17217447210047,0,0.308482478109971,3.00343057843917,0.285826432630578,0.112131084345361,0,0,12.6686281442622,14.3062578340753,0.845302752556,15.1584726453376,12.4808924293639,0,0,0,1.85871391755592,20.6196210048748,4.11620168390384,0.325736184293735,1.77695974371273,1.58390374586686,0,0.871533458600294,0.399891964728228,0,0,0,0,0,0,0.868687840005475,0.410952645100767,0.358121926479791,0,1.18218456121156,1.94064817373566,2.05348858047597,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0.178428988797162,0,0,0,0,0,0,0,1.30325421702124,0.391602314925481,0,0.206768026122887,1.2942852049117,0.320182673410333,0,1.66435439510497,0,5.95458738765064,0.767309866440312,8.98112302185835,10.3792710897118,6.14048698880044,5.62988724002626,0,6.63101683351419,4.79416658345443,1.72467027628999,8.82732529612156,6.97262270759755,0,0,0,7.23331023437022,22.9434871688463,24.9136388422906,0,0,0,0,0.105551628892876,0,0,0,0,0.541892875087706,0.501689773854853,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0.574265537996172,1.30012049207304,0,0.290012154876366,1.07834031980251,1.07452572308291,0.964856007391714,2.79292636657511,2.61030049045611,1.19317278382541,0.267096106940212,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0.949138274156178,10.6752908597342,4.09436466098134,4.2793898803392,0,0,10.6124749974156,19.7666661409959,15.0799875002479,0.202182481573316,0,0,2.92580243453754,0,0,0.818999468447914,46.3809816808178,0,0,0,0.438450885253763,7.52408194546694,5.24715801637306,0,0,0,2.00775893085672,2.06322986127554,0,3.90237170477658,1.26664581178598,0,1.13841952129715,4.54915136318478,0,0.670302275535787,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0,0,0,0,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,1.90995587790152,0,0.921482106297696,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0.622079175323615,0,0,0,0.493217028184668,2.3948309234694,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0.868124974666461,0,0,0,0.331737779793674,0.295547618953547,0.219385397153973,0,0,1.15425387755696,0,0.23056390438806,0,0,1.27600463892768,7.14461228534526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0.61214552326098,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,1.22308667769421,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0,0,0,0.640358984218058,0.19980960958213,0,0,0.171594997861965,0,0,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.551639951094387,0,0,0,0,0,0,0,0.542999601753713,9.50643640321395,1.95952416065645,0,0,0,0,0.293104467356165,0,0,0,0,0,0.320362237703084,0.471612915298998,0,0,0.197611631897944,0,0,0.544017803369474,0.5013797880454,0,0,0,0,0,0,0,0,0,0.553394539744923,0,0,0,0,0,0,1.0447836202081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| 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| ||
|short_description=p4@SPON2 | |||
}} | }} |
Latest revision as of 20:22, 24 September 2015
Short description: | p4@SPON2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SPON2_5end |
Coexpression cluster: | C574_Mesenchymal_Fibroblast_Smooth_Prostate_Adipocyte_Hair_mesenchymal |
Association with transcript: | -7bp_to_ENST00000509697_5end |
EntrezGene: | SPON2 |
HGNC: | 11253 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.00e-16 | 427 |
somatic stem cell | 3.87e-16 | 433 |
stem cell | 5.23e-16 | 441 |
preadipocyte | 8.80e-14 | 12 |
fat cell | 5.07e-13 | 15 |
mesenchymal cell | 2.58e-11 | 354 |
connective tissue cell | 2.95e-11 | 361 |
motile cell | 1.44e-09 | 386 |
fibroblast | 3.78e-09 | 76 |
hair follicle cell | 9.74e-09 | 5 |
extraembryonic cell | 1.65e-07 | 19 |
mesenchymal stem cell of adipose | 2.14e-07 | 8 |
adipocyte of omentum tissue | 5.89e-07 | 3 |
enteric smooth muscle cell | 6.60e-07 | 3 |
smooth muscle cell of large intestine | 6.60e-07 | 3 |
smooth muscle cell of colon | 6.60e-07 | 3 |
prostate stromal cell | 6.60e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.07e-11 | 6 |
peritoneum | 1.07e-11 | 6 |
abdominal cavity | 1.07e-11 | 6 |
visceral peritoneum | 1.07e-11 | 6 |
adipose tissue | 1.65e-10 | 14 |
connective tissue | 2.06e-10 | 371 |
hypodermis | 5.28e-09 | 5 |
hair follicle | 9.74e-09 | 5 |
hair follicle placode | 9.74e-09 | 5 |
somite | 2.41e-08 | 71 |
presomitic mesoderm | 2.41e-08 | 71 |
presumptive segmental plate | 2.41e-08 | 71 |
dermomyotome | 2.41e-08 | 71 |
trunk paraxial mesoderm | 2.41e-08 | 71 |
paraxial mesoderm | 3.84e-08 | 72 |
presumptive paraxial mesoderm | 3.84e-08 | 72 |
mesoderm | 5.30e-08 | 315 |
mesoderm-derived structure | 5.30e-08 | 315 |
presumptive mesoderm | 5.30e-08 | 315 |
dense mesenchyme tissue | 6.05e-08 | 73 |
organ component layer | 6.33e-08 | 66 |
epithelial vesicle | 9.12e-08 | 78 |
trunk mesenchyme | 1.29e-07 | 122 |
female gonad | 1.46e-07 | 13 |
left ovary | 1.97e-07 | 4 |
multilaminar epithelium | 6.59e-07 | 83 |
cavity lining | 7.29e-07 | 12 |
serous membrane | 7.29e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.22e-13 | 14 |