FFCP PHASE1:Hg19::chr5:137225159..137225171,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27039 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9012 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=1bp_to_ENST00000290431_5end | |||
|cluster_id=chr5:137225159..137225171,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_PKD2L2_5end | |||
|id=chr5:137225159..137225171,+ | |||
|ontology_enrichment_celltype=CL:0000838!4.90e-08!52;CL:0000542!8.97e-08!53;CL:0000051!8.97e-08!53;CL:0000738!9.20e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0002188;3.60e-11;5!CL:1000746;2.35e-08;7!CL:1000612;2.35e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,3.60e-11,5;CL:1000746,2.35e-08,7;CL:1000612,2.35e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.09e-15!57;UBERON:0005068!9.09e-15!57;UBERON:0006241!9.09e-15!57;UBERON:0007135!9.09e-15!57;UBERON:0002616!5.71e-14!59;UBERON:0002780!1.56e-11!41;UBERON:0001890!1.56e-11!41;UBERON:0006240!1.56e-11!41;UBERON:0003080!4.11e-11!42;UBERON:0002346!9.72e-11!90;UBERON:0000955!1.92e-10!69;UBERON:0006238!1.92e-10!69;UBERON:0001893!1.25e-09!34;UBERON:0002020!1.27e-09!34;UBERON:0003528!1.27e-09!34;UBERON:0003075!2.93e-09!86;UBERON:0007284!2.93e-09!86;UBERON:0001869!3.28e-09!32;UBERON:0001017!3.66e-09!82;UBERON:0002791!5.79e-09!33;UBERON:0005743!2.33e-08!86;UBERON:0000073!5.82e-08!94;UBERON:0001016!5.82e-08!94;UBERON:0002420!1.98e-07!9;UBERON:0007245!1.98e-07!9;UBERON:0010009!1.98e-07!9;UBERON:0010011!1.98e-07!9;UBERON:0000454!1.98e-07!9;UBERON:0007023!2.76e-07!115;UBERON:0009663!3.10e-07!7;UBERON:0002308!4.86e-07!9;UBERON:0000125!4.86e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22!UBERON:0000074;2.35e-08;7!UBERON:0001229;2.35e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0003135,4.28e-19,11;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22;UBERON:0003886,3.71e-09,54;UBERON:0010532,2.35e-08,7;UBERON:0000074,2.35e-08,7;UBERON:0001229,2.35e-08,7;UBERON:0001230,2.35e-08,7;UBERON:0003220,2.35e-08,7;UBERON:0005749,2.35e-08,7;UBERON:0004199,2.35e-08,7;UBERON:0004209,2.35e-08,7;UBERON:0004198,2.35e-08,7;UBERON:0002553,3.34e-08,61;UBERON:0005103,1.80e-07,8;UBERON:0000083,1.80e-07,8;UBERON:0009201,1.80e-07,8;UBERON:0006553,1.80e-07,8;UBERON:0003074,1.80e-07,8;UBERON:0003060,1.80e-07,8;UBERON:0000080,8.85e-07,9;UBERON:0002120,8.85e-07,9;UBERON:0004875,8.85e-07,9;UBERON:0005721,8.85e-07,9;UBERON:0005754,8.85e-07,9;UBERON:0007297,8.85e-07,9 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0.218441372130172,0,0,0,0,0.602694528023977,0,0,0.246242116153576,0,0,0,0,0,0.229240217243854,0.246301768349837,0.0787107813136792,0.393364276848904,0.383829398097213,0,0,0,0.369754010166788,0.154934401160603,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0.426224750532694,0,0,0,0,0,0.217188844705117,0,0,0,0.211255286311942,0,0,0,0,0.16072558669708,0,0.19891667719909,0,0,0.546138611262131,0.889509253863555,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0.511946444617674,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,2.16115474571226,0,0,0,0,0.132957960518865,0,0.571994910780128,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0,0,0.176096868026452,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0.513372145118994,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,1.13733384070897,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0.27470839445503,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0.403599414382095,0,0,0,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0,0.445773537109913,0,0,0,0,0,0.422008249231538,0,0.659215496907038,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0.361789315876224,0,0.442317039724898,0.591095237907095,0.219385397153973,0.10893846351899,0,0,0,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0.225595660617181,0,0.167821586975843,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,0,0,0.234264445725339,0.729819156862664,0,0.242780379534093,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219267951258557,0.164230914106418,0,0,0,0.137041924646751,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0.525774708558629,0,0,0.717873024576814,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0.196854963029498,0.169346664131569,0,0.272406812223151,0,0,0.83088067605837,0,0,0.121499113316049,0,0.0788057072991982,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0.250381861413,0.573409195690071,0.443716206147409,0.18628920882415,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0.265729680626726,0.327130788511688,0,0,0,0,0,0.344429959321631,0,0,0,0,0,0,0,0.109209638192014,0.509197589862076,0,0.123935764259002,0,0,0,0.80057074828547,0,0,0.128458450192919,0,0,0.205116364240755,0.252071696221718,0.345786262321089,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0.781078098613847,0,0.126831620387814,0,0,0,0.175871244359621,0,0,0.672567444437648,0,0.227662191351298,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0.9555033757741,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.198950775161368,0.356760272332706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0.286679166302903,0,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0,0,0.275684698604535,0,4.01627100556669,6.16317499359211,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@PKD2L2 | |||
}} |
Latest revision as of 21:36, 24 September 2015
Short description: | p2@PKD2L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PKD2L2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 1bp_to_ENST00000290431_5end |
EntrezGene: | PKD2L2 |
HGNC: | 9012 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 3.60e-11 | 5 |
glomerular cell | 2.35e-08 | 7 |
kidney corpuscule cell | 2.35e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
male reproductive organ | 4.28e-19 | 11 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |
body cavity precursor | 3.71e-09 | 54 |
primitive nephron | 2.35e-08 | 7 |
renal glomerulus | 2.35e-08 | 7 |
renal corpuscle | 2.35e-08 | 7 |
glomerular capsule | 2.35e-08 | 7 |
metanephric mesenchyme | 2.35e-08 | 7 |
glomerular tuft | 2.35e-08 | 7 |
S-shaped body | 2.35e-08 | 7 |
renal vesicle | 2.35e-08 | 7 |
comma-shaped body | 2.35e-08 | 7 |
anatomical cavity | 3.34e-08 | 61 |
mesonephric epithelium | 1.80e-07 | 8 |
mesonephric tubule | 1.80e-07 | 8 |
nephric duct | 1.80e-07 | 8 |
renal duct | 1.80e-07 | 8 |
mesonephric duct | 1.80e-07 | 8 |
pronephric duct | 1.80e-07 | 8 |
mesonephros | 8.85e-07 | 9 |
pronephros | 8.85e-07 | 9 |
nephrogenic cord | 8.85e-07 | 9 |
pronephric mesoderm | 8.85e-07 | 9 |
rostral part of nephrogenic cord | 8.85e-07 | 9 |
presumptive pronephric mesoderm | 8.85e-07 | 9 |