FFCP PHASE1:Hg19::chr12:77272786..77272806,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:77272786..77272806,- to FFCP PHASE1:Hg19::chr12:77272786..77272806,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1466 | |EntrezGene=1466 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2470 | |HGNC=2470 | ||
|TSSclassifier=strong | |||
|UniProt=Q16527 | |UniProt=Q16527 | ||
|association_with_transcript=0bp_to_ENST00000546966,NM_001321,uc001syl.1_5end | |||
|cluster_id=chr12:77272786..77272806,- | |||
|description=CAGE_peak_1_at_CSRP2_5end | |||
|id=chr12:77272786..77272806,- | |||
|ontology_enrichment_celltype=CL:0000055!2.01e-07!180;CL:0002319!2.59e-07!25;CL:0000221!5.63e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.29e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.33e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!9.60e-18!659;UBERON:0000475!8.53e-16!365;UBERON:0000064!2.18e-15!219;UBERON:0000481!5.22e-15!347;UBERON:0000467!5.44e-12!625;UBERON:0000480!6.85e-12!626;UBERON:0004121!1.24e-11!169;UBERON:0000062!7.08e-11!511;UBERON:0000922!8.01e-11!612;UBERON:0000924!9.54e-11!173;UBERON:0006601!9.54e-11!173;UBERON:0000033!7.08e-09!123;UBERON:0002050!9.47e-09!605;UBERON:0005423!9.47e-09!605;UBERON:0005743!1.07e-08!86;UBERON:0000923!1.48e-08!604;UBERON:0005291!1.48e-08!604;UBERON:0006598!1.48e-08!604;UBERON:0002532!1.48e-08!604;UBERON:0000153!1.71e-08!129;UBERON:0007811!1.71e-08!129;UBERON:0000073!2.14e-08!94;UBERON:0001016!2.14e-08!94;UBERON:0000063!3.01e-08!97;UBERON:0000119!4.13e-08!312;UBERON:0000483!5.28e-08!309;UBERON:0001017!8.14e-08!82;UBERON:0003075!9.90e-08!86;UBERON:0007284!9.90e-08!86;UBERON:0001008!1.31e-07!45;UBERON:0006554!2.02e-07!44;UBERON:0002346!9.10e-07!90 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,1.88e-11,223;UBERON:0004121,1.56e-10,171;UBERON:0000924,1.56e-10,171;UBERON:0006601,1.56e-10,171;UBERON:0000922,1.87e-09,592;UBERON:0001008,1.21e-08,48;UBERON:0006554,1.88e-08,47;UBERON:0005423,2.86e-08,581;UBERON:0003075,8.09e-08,82;UBERON:0007284,8.09e-08,82;UBERON:0000119,1.66e-07,309;UBERON:0000483,2.11e-07,306;UBERON:0010314,2.14e-07,132;UBERON:0001017,2.25e-07,81;UBERON:0004119,2.89e-07,160;UBERON:0000925,2.89e-07,160;UBERON:0006595,2.89e-07,160;UBERON:0010371,3.57e-07,104;UBERON:0001016,3.94e-07,89;UBERON:0002346,8.11e-07,86 | |||
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| ||
|short_description=p1@CSRP2 | |||
}} | }} |
Latest revision as of 21:52, 24 September 2015
Short description: | p1@CSRP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CSRP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000546966, NM_001321, uc001syl.1_5end |
EntrezGene: | CSRP2 |
HGNC: | 2470 |
UniProt: | Q16527 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.33e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 1.88e-11 | 223 |
ectoderm-derived structure | 1.56e-10 | 171 |
ectoderm | 1.56e-10 | 171 |
presumptive ectoderm | 1.56e-10 | 171 |
embryo | 1.87e-09 | 592 |
renal system | 1.21e-08 | 48 |
urinary system structure | 1.88e-08 | 47 |
developing anatomical structure | 2.86e-08 | 581 |
neural plate | 8.09e-08 | 82 |
presumptive neural plate | 8.09e-08 | 82 |
cell layer | 1.66e-07 | 309 |
epithelium | 2.11e-07 | 306 |
structure with developmental contribution from neural crest | 2.14e-07 | 132 |
central nervous system | 2.25e-07 | 81 |
endoderm-derived structure | 2.89e-07 | 160 |
endoderm | 2.89e-07 | 160 |
presumptive endoderm | 2.89e-07 | 160 |
ecto-epithelium | 3.57e-07 | 104 |
nervous system | 3.94e-07 | 89 |
neurectoderm | 8.11e-07 | 86 |