FFCP PHASE1:Hg19::chrX:38186775..38186802,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6103 | |EntrezGene=6103 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10295 | |HGNC=10295 | ||
|TSSclassifier=strong | |||
|UniProt=Q92834,E9PE28,Q3KN84 | |UniProt=Q92834,E9PE28,Q3KN84 | ||
|association_with_transcript=0bp_to_ENST00000309513,ENST00000338898,ENST00000339363,ENST00000342811,ENST00000378505,NM_000328,NM_001034853,uc004dea.2,uc004deb.2,uc004dec.2,uc004ded.1_5end | |association_with_transcript=0bp_to_ENST00000309513,ENST00000338898,ENST00000339363,ENST00000342811,ENST00000378505,NM_000328,NM_001034853,uc004dea.2,uc004deb.2,uc004dec.2,uc004ded.1_5end | ||
|cluster_id=chrX:38186775..38186802,- | |||
|description=CAGE_peak_2_at_RPGR_5end | |description=CAGE_peak_2_at_RPGR_5end | ||
|id=chrX:38186775..38186802,- | |id=chrX:38186775..38186802,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.14e-12!115;UBERON:0001049!8.26e-12!57;UBERON:0005068!8.26e-12!57;UBERON:0006241!8.26e-12!57;UBERON:0007135!8.26e-12!57;UBERON:0000073!3.32e-09!94;UBERON:0001016!3.32e-09!94;UBERON:0002346!4.92e-09!90;UBERON:0001017!5.70e-09!82;UBERON:0002616!6.11e-09!59;UBERON:0003080!7.54e-09!42;UBERON:0002780!8.57e-09!41;UBERON:0001890!8.57e-09!41;UBERON:0006240!8.57e-09!41;UBERON:0005743!1.02e-08!86;UBERON:0000955!1.90e-08!69;UBERON:0006238!1.90e-08!69;UBERON:0003075!5.79e-08!86;UBERON:0007284!5.79e-08!86 | |ontology_enrichment_uberon=UBERON:0007023!4.14e-12!115;UBERON:0001049!8.26e-12!57;UBERON:0005068!8.26e-12!57;UBERON:0006241!8.26e-12!57;UBERON:0007135!8.26e-12!57;UBERON:0000073!3.32e-09!94;UBERON:0001016!3.32e-09!94;UBERON:0002346!4.92e-09!90;UBERON:0001017!5.70e-09!82;UBERON:0002616!6.11e-09!59;UBERON:0003080!7.54e-09!42;UBERON:0002780!8.57e-09!41;UBERON:0001890!8.57e-09!41;UBERON:0006240!8.57e-09!41;UBERON:0005743!1.02e-08!86;UBERON:0000955!1.90e-08!69;UBERON:0006238!1.90e-08!69;UBERON:0003075!5.79e-08!86;UBERON:0007284!5.79e-08!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;4.34e-07;53!UBERON:0002616;4.34e-07;53!UBERON:0002780;6.04e-07;41!UBERON:0001890;6.04e-07;41 | |ontology_enrichment_uberon_v019=UBERON:0000073;4.34e-07;53!UBERON:0002616;4.34e-07;53!UBERON:0002780;6.04e-07;41!UBERON:0001890;6.04e-07;41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.09e-12,114;UBERON:0001049,8.94e-12,56;UBERON:0005068,8.94e-12,56;UBERON:0006241,8.94e-12,56;UBERON:0007135,8.94e-12,56;UBERON:0000073,1.11e-10,53;UBERON:0002616,1.11e-10,53;UBERON:0001016,3.43e-09,89;UBERON:0002780,8.27e-09,41;UBERON:0001890,8.27e-09,41;UBERON:0003080,8.27e-09,41;UBERON:0006240,8.27e-09,41;UBERON:0001017,1.10e-08,81;UBERON:0002346,2.20e-08,86;UBERON:0000955,3.32e-08,68;UBERON:0006238,3.32e-08,68;UBERON:0003075,2.50e-07,82;UBERON:0007284,2.50e-07,82 | |||
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| ||
|short_description=p2@RPGR | |short_description=p2@RPGR | ||
}} | }} |
Latest revision as of 23:58, 24 September 2015
Short description: | p2@RPGR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RPGR_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000309513, ENST00000338898, ENST00000339363, ENST00000342811, ENST00000378505, NM_000328, NM_001034853, uc004dea.2, uc004deb.2, uc004dec.2, uc004ded.1_5end |
EntrezGene: | RPGR |
HGNC: | 10295 |
UniProt: | Q92834E9PE28Q3KN84 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 6.09e-12 | 114 |
neural tube | 8.94e-12 | 56 |
neural rod | 8.94e-12 | 56 |
future spinal cord | 8.94e-12 | 56 |
neural keel | 8.94e-12 | 56 |
regional part of nervous system | 1.11e-10 | 53 |
regional part of brain | 1.11e-10 | 53 |
nervous system | 3.43e-09 | 89 |
regional part of forebrain | 8.27e-09 | 41 |
forebrain | 8.27e-09 | 41 |
anterior neural tube | 8.27e-09 | 41 |
future forebrain | 8.27e-09 | 41 |
central nervous system | 1.10e-08 | 81 |
neurectoderm | 2.20e-08 | 86 |
brain | 3.32e-08 | 68 |
future brain | 3.32e-08 | 68 |
neural plate | 2.50e-07 | 82 |
presumptive neural plate | 2.50e-07 | 82 |