FFCP PHASE1:Hg19::chr11:108800302..108800338,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1662 | |EntrezGene=1662 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2735 | |HGNC=2735 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=56bp_to_ENST00000534221_5end | |association_with_transcript=56bp_to_ENST00000534221_5end | ||
|cluster_id=chr11:108800302..108800338,+ | |||
|coexpression_cluster_id=C2093 | |coexpression_cluster_id=C2093 | ||
|description=CAGE_peak_2_at_DDX10_5end | |description=CAGE_peak_2_at_DDX10_5end | ||
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|ontology_enrichment_celltype=CL:0000548!2.41e-24!679;CL:0000004!2.41e-24!679;CL:0000255!2.41e-24!679;CL:0000012!1.02e-23!682;CL:0000055!1.63e-23!180;CL:0002371!6.50e-23!591;CL:0000144!7.24e-23!625;CL:0000220!2.20e-19!246;CL:0002321!7.92e-19!248;CL:0000003!9.76e-17!722;CL:0000222!3.18e-16!119;CL:0000680!4.11e-14!57;CL:0000056!4.11e-14!57;CL:0000355!4.11e-14!57;CL:0000187!7.34e-13!54;CL:0000183!1.52e-12!59;CL:0000393!2.65e-12!60;CL:0000211!2.65e-12!60;CL:0000192!4.76e-12!42;CL:0000514!4.76e-12!42;CL:0000057!2.07e-11!75;CL:0000359!1.38e-10!32;CL:0002620!1.29e-09!23;CL:0000723!1.68e-08!436;CL:0000048!4.04e-08!430;CL:0000034!1.84e-07!444;CL:0002139!4.94e-07!24 | |ontology_enrichment_celltype=CL:0000548!2.41e-24!679;CL:0000004!2.41e-24!679;CL:0000255!2.41e-24!679;CL:0000012!1.02e-23!682;CL:0000055!1.63e-23!180;CL:0002371!6.50e-23!591;CL:0000144!7.24e-23!625;CL:0000220!2.20e-19!246;CL:0002321!7.92e-19!248;CL:0000003!9.76e-17!722;CL:0000222!3.18e-16!119;CL:0000680!4.11e-14!57;CL:0000056!4.11e-14!57;CL:0000355!4.11e-14!57;CL:0000187!7.34e-13!54;CL:0000183!1.52e-12!59;CL:0000393!2.65e-12!60;CL:0000211!2.65e-12!60;CL:0000192!4.76e-12!42;CL:0000514!4.76e-12!42;CL:0000057!2.07e-11!75;CL:0000359!1.38e-10!32;CL:0002620!1.29e-09!23;CL:0000723!1.68e-08!436;CL:0000048!4.04e-08!430;CL:0000034!1.84e-07!444;CL:0002139!4.94e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000359;7.02e-11;32!CL:0002620;3.16e-10;23!CL:0000860;1.64e-09;33!CL:0002057;1.64e-09;33!CL:0000192;4.44e-09;43!CL:0002539;2.81e-07;10 | |ontology_enrichment_celltype_v019=CL:0000359;7.02e-11;32!CL:0002620;3.16e-10;23!CL:0000860;1.64e-09;33!CL:0002057;1.64e-09;33!CL:0000192;4.44e-09;43!CL:0002539;2.81e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.86e-11,43;CL:0000514,1.86e-11,43;CL:0000359,3.62e-11,32;CL:0000222,4.29e-11,121;CL:0002620,3.35e-10,23;CL:0000680,7.07e-10,58;CL:0000056,7.07e-10,58;CL:0000355,7.07e-10,58;CL:0002321,1.52e-09,250;CL:0000187,4.40e-09,55;CL:0000393,9.28e-09,61;CL:0000211,9.28e-09,61;CL:0000723,2.99e-08,433;CL:0000048,4.22e-08,427;CL:0000034,1.56e-07,441;CL:0002539,2.47e-07,10;CL:0000057,6.55e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000514;4.44e-09;43 | |ontology_enrichment_development_v019=CL:0000514;4.44e-09;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;7.49e-07;5!DOID:450;7.49e-07;5!DOID:66;7.49e-07;5!DOID:423;7.49e-07;5!DOID:0080000;7.49e-07;5!DOID:11722;7.49e-07;5 | |ontology_enrichment_disease_v019=DOID:17;7.49e-07;5!DOID:450;7.49e-07;5!DOID:66;7.49e-07;5!DOID:423;7.49e-07;5!DOID:0080000;7.49e-07;5!DOID:11722;7.49e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,7.35e-07,5;DOID:450,7.35e-07,5;DOID:66,7.35e-07,5;DOID:423,7.35e-07,5;DOID:0080000,7.35e-07,5;DOID:11722,7.35e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002049!8.70e-16!79;UBERON:0007798!8.70e-16!79;UBERON:0001637!7.31e-15!42;UBERON:0003509!7.31e-15!42;UBERON:0004572!7.31e-15!42;UBERON:0000914!2.11e-14!83;UBERON:0002329!2.11e-14!83;UBERON:0003077!2.11e-14!83;UBERON:0003059!2.11e-14!83;UBERON:0007282!2.11e-14!83;UBERON:0009618!2.11e-14!83;UBERON:0007285!2.11e-14!83;UBERON:0004573!2.24e-14!33;UBERON:0004571!2.24e-14!33;UBERON:0004290!5.86e-13!70;UBERON:0000490!9.72e-13!138;UBERON:0001981!1.67e-12!60;UBERON:0007500!1.67e-12!60;UBERON:0004537!1.67e-12!60;UBERON:0006965!1.67e-12!60;UBERON:0000055!4.87e-12!69;UBERON:0001134!5.07e-12!61;UBERON:0002036!5.07e-12!61;UBERON:0003082!5.07e-12!61;UBERON:0004872!1.97e-11!84;UBERON:0004535!1.98e-11!110;UBERON:0002385!4.25e-11!63;UBERON:0001015!4.25e-11!63;UBERON:0000383!4.25e-11!63;UBERON:0001009!1.64e-10!113;UBERON:0005256!2.51e-10!143;UBERON:0003914!5.99e-10!118;UBERON:0000486!9.02e-10!82;UBERON:0002204!9.90e-10!167;UBERON:0000467!3.29e-09!625;UBERON:0000480!4.51e-09!626;UBERON:0000947!6.65e-08!21;UBERON:0010191!6.65e-08!21;UBERON:0000468!1.57e-07!659;UBERON:0000926!3.49e-07!448;UBERON:0004120!3.49e-07!448;UBERON:0006603!3.49e-07!448 | |ontology_enrichment_uberon=UBERON:0002049!8.70e-16!79;UBERON:0007798!8.70e-16!79;UBERON:0001637!7.31e-15!42;UBERON:0003509!7.31e-15!42;UBERON:0004572!7.31e-15!42;UBERON:0000914!2.11e-14!83;UBERON:0002329!2.11e-14!83;UBERON:0003077!2.11e-14!83;UBERON:0003059!2.11e-14!83;UBERON:0007282!2.11e-14!83;UBERON:0009618!2.11e-14!83;UBERON:0007285!2.11e-14!83;UBERON:0004573!2.24e-14!33;UBERON:0004571!2.24e-14!33;UBERON:0004290!5.86e-13!70;UBERON:0000490!9.72e-13!138;UBERON:0001981!1.67e-12!60;UBERON:0007500!1.67e-12!60;UBERON:0004537!1.67e-12!60;UBERON:0006965!1.67e-12!60;UBERON:0000055!4.87e-12!69;UBERON:0001134!5.07e-12!61;UBERON:0002036!5.07e-12!61;UBERON:0003082!5.07e-12!61;UBERON:0004872!1.97e-11!84;UBERON:0004535!1.98e-11!110;UBERON:0002385!4.25e-11!63;UBERON:0001015!4.25e-11!63;UBERON:0000383!4.25e-11!63;UBERON:0001009!1.64e-10!113;UBERON:0005256!2.51e-10!143;UBERON:0003914!5.99e-10!118;UBERON:0000486!9.02e-10!82;UBERON:0002204!9.90e-10!167;UBERON:0000467!3.29e-09!625;UBERON:0000480!4.51e-09!626;UBERON:0000947!6.65e-08!21;UBERON:0010191!6.65e-08!21;UBERON:0000468!1.57e-07!659;UBERON:0000926!3.49e-07!448;UBERON:0004120!3.49e-07!448;UBERON:0006603!3.49e-07!448 | ||
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| ||
|short_description=p2@DDX10 | |short_description=p2@DDX10 | ||
}} | }} |
Latest revision as of 00:17, 25 September 2015
Short description: | p2@DDX10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DDX10_5end |
Coexpression cluster: | C2093_mesenchymal_mucinous_bile_Fibroblast_lung_Smooth_liposarcoma |
Association with transcript: | 56bp_to_ENST00000534221_5end |
EntrezGene: | DDX10 |
HGNC: | 2735 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.86e-11 | 43 |
smooth muscle myoblast | 1.86e-11 | 43 |
vascular associated smooth muscle cell | 3.62e-11 | 32 |
mesodermal cell | 4.29e-11 | 121 |
skin fibroblast | 3.35e-10 | 23 |
muscle precursor cell | 7.07e-10 | 58 |
myoblast | 7.07e-10 | 58 |
multi-potent skeletal muscle stem cell | 7.07e-10 | 58 |
embryonic cell | 1.52e-09 | 250 |
muscle cell | 4.40e-09 | 55 |
electrically responsive cell | 9.28e-09 | 61 |
electrically active cell | 9.28e-09 | 61 |
somatic stem cell | 2.99e-08 | 433 |
multi fate stem cell | 4.22e-08 | 427 |
stem cell | 1.56e-07 | 441 |
aortic smooth muscle cell | 2.47e-07 | 10 |
fibroblast | 6.55e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.35e-07 | 5 |
myotonic disease | 7.35e-07 | 5 |
muscle tissue disease | 7.35e-07 | 5 |
myopathy | 7.35e-07 | 5 |
muscular disease | 7.35e-07 | 5 |
myotonic dystrophy | 7.35e-07 | 5 |