FFCP PHASE1:Hg19::chr17:43311522..43311537,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:43311522..43311537,+
|short_description=p17@FMNL1
|description=CAGE_peak_17_at_FMNL1_5end
|association_with_transcript=271bp_to_AK131091_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=752 | |EntrezGene=752 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1212 | |HGNC=1212 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZNK3 | |UniProt=Q6ZNK3 | ||
|association_with_transcript=271bp_to_AK131091_5end | |||
|cluster_id=chr17:43311522..43311537,+ | |||
|coexpression_cluster_id=C107 | |||
|description=CAGE_peak_17_at_FMNL1_5end | |||
|id=chr17:43311522..43311537,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.03e-61!140;CL:0000037!8.51e-53!172;CL:0000566!8.51e-53!172;CL:0002087!8.72e-51!119;CL:0000988!1.98e-50!182;CL:0002032!1.46e-49!165;CL:0000837!1.46e-49!165;CL:0002031!1.51e-47!124;CL:0002057!1.22e-40!42;CL:0000860!5.17e-40!45;CL:0000766!1.27e-39!76;CL:0002009!1.89e-34!65;CL:0002194!1.94e-34!63;CL:0000576!1.94e-34!63;CL:0000040!1.94e-34!63;CL:0000559!1.94e-34!63;CL:0000557!2.48e-34!71;CL:0000839!1.67e-33!70;CL:0000763!3.49e-33!112;CL:0000049!3.49e-33!112;CL:0000542!3.75e-14!53;CL:0000051!3.75e-14!53;CL:0000838!1.21e-13!52;CL:0000134!6.26e-13!358;CL:0000084!4.49e-12!25;CL:0000827!4.49e-12!25;CL:0002320!4.50e-12!365;CL:0000219!2.25e-11!390;CL:0000791!1.35e-07!18;CL:0000789!1.35e-07!18;CL:0002420!1.35e-07!18;CL:0002419!1.35e-07!18;CL:0000790!1.35e-07!18;CL:0000625!4.93e-07!11;CL:0000048!8.25e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.29e-94;33!CL:0002057;1.29e-94;33!CL:0000473;2.53e-66;39!CL:0000234;2.53e-66;39!CL:0000576;2.74e-54;48!CL:0000766;6.48e-36;69!CL:0000763;9.64e-20;100!CL:0000775;1.81e-15;3!CL:0000738;1.91e-14;136!CL:0002087;7.18e-14;104!CL:0000094;7.50e-10;8!CL:0000081;3.55e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.27e-102,42;CL:0002057,1.27e-102,42;CL:0000473,6.00e-89,48;CL:0000234,6.00e-89,48;CL:0000766,4.70e-73,72;CL:0002194,8.47e-70,59;CL:0000576,8.47e-70,59;CL:0000040,8.47e-70,59;CL:0000559,8.47e-70,59;CL:0002009,2.51e-67,61;CL:0000839,8.57e-62,66;CL:0000557,8.76e-61,67;CL:0000763,2.03e-49,108;CL:0000049,2.03e-49,108;CL:0000738,3.67e-45,136;CL:0002087,3.58e-40,115;CL:0002031,3.26e-38,120;CL:0002032,5.26e-37,161;CL:0000837,5.26e-37,161;CL:0000037,3.75e-35,168;CL:0000988,5.53e-33,177;CL:0000775,2.00e-15,3;CL:0000134,1.30e-12,354;CL:0002320,3.25e-12,361;CL:0000219,8.25e-11,386;CL:0000094,8.05e-10,8;CL:0000048,4.32e-09,427;CL:0000723,7.46e-09,433;CL:0000034,1.51e-08,441;CL:0000081,3.74e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.18e-70;42!CL:0000049;1.71e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.62e-37!102;UBERON:0003061!5.62e-37!102;UBERON:0002193!1.68e-32!112;UBERON:0002371!9.04e-30!80;UBERON:0001474!1.95e-27!86;UBERON:0004765!2.37e-21!101;UBERON:0001434!2.37e-21!101;UBERON:0002405!7.18e-20!115;UBERON:0002384!2.54e-11!375;UBERON:0002204!3.94e-08!167;UBERON:0003081!5.19e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.03e-53,76;UBERON:0001474,1.46e-48,82;UBERON:0002390,2.33e-45,98;UBERON:0003061,2.33e-45,98;UBERON:0004765,1.09e-43,90;UBERON:0002405,4.49e-42,93;UBERON:0002193,1.52e-40,108;UBERON:0001434,1.11e-38,100;UBERON:0002204,1.66e-20,167;UBERON:0003081,2.54e-18,203;UBERON:0002384,1.14e-11,371;UBERON:0000926,2.73e-09,315;UBERON:0004120,2.73e-09,315;UBERON:0006603,2.73e-09,315 | |||
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| ||
|short_description=p17@FMNL1 | |||
}} | }} |
Latest revision as of 01:27, 25 September 2015
Short description: | p17@FMNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_FMNL1_5end |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | 271bp_to_AK131091_5end |
EntrezGene: | FMNL1 |
HGNC: | 1212 |
UniProt: | Q6ZNK3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.27e-102 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.27e-102 | 42 |
defensive cell | 6.00e-89 | 48 |
phagocyte | 6.00e-89 | 48 |
myeloid leukocyte | 4.70e-73 | 72 |
monopoietic cell | 8.47e-70 | 59 |
monocyte | 8.47e-70 | 59 |
monoblast | 8.47e-70 | 59 |
promonocyte | 8.47e-70 | 59 |
macrophage dendritic cell progenitor | 2.51e-67 | 61 |
myeloid lineage restricted progenitor cell | 8.57e-62 | 66 |
granulocyte monocyte progenitor cell | 8.76e-61 | 67 |
myeloid cell | 2.03e-49 | 108 |
common myeloid progenitor | 2.03e-49 | 108 |
leukocyte | 3.67e-45 | 136 |
nongranular leukocyte | 3.58e-40 | 115 |
hematopoietic lineage restricted progenitor cell | 3.26e-38 | 120 |
hematopoietic oligopotent progenitor cell | 5.26e-37 | 161 |
hematopoietic multipotent progenitor cell | 5.26e-37 | 161 |
hematopoietic stem cell | 3.75e-35 | 168 |
hematopoietic cell | 5.53e-33 | 177 |
neutrophil | 2.00e-15 | 3 |
mesenchymal cell | 1.30e-12 | 354 |
connective tissue cell | 3.25e-12 | 361 |
motile cell | 8.25e-11 | 386 |
granulocyte | 8.05e-10 | 8 |
multi fate stem cell | 4.32e-09 | 427 |
somatic stem cell | 7.46e-09 | 433 |
stem cell | 1.51e-08 | 441 |
blood cell | 3.74e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.03e-53 | 76 |
bone element | 1.46e-48 | 82 |
hematopoietic system | 2.33e-45 | 98 |
blood island | 2.33e-45 | 98 |
skeletal element | 1.09e-43 | 90 |
immune system | 4.49e-42 | 93 |
hemolymphoid system | 1.52e-40 | 108 |
skeletal system | 1.11e-38 | 100 |
musculoskeletal system | 1.66e-20 | 167 |
lateral plate mesoderm | 2.54e-18 | 203 |
connective tissue | 1.14e-11 | 371 |
mesoderm | 2.73e-09 | 315 |
mesoderm-derived structure | 2.73e-09 | 315 |
presumptive mesoderm | 2.73e-09 | 315 |