FFCP PHASE1:Hg19::chr22:44464923..44464934,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:44464923..44464934,+
|short_description=p12@PARVB
|description=CAGE_peak_12_at_PARVB_5end
|association_with_transcript=-6bp_to_ENST00000404989,uc003beo.2_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29780 | |EntrezGene=29780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14653 | |HGNC=14653 | ||
|TSSclassifier=strong | |||
|UniProt=B0QYM8 | |UniProt=B0QYM8 | ||
|association_with_transcript=-6bp_to_ENST00000404989,uc003beo.2_5end | |||
|cluster_id=chr22:44464923..44464934,+ | |||
|description=CAGE_peak_12_at_PARVB_5end | |||
|id=chr22:44464923..44464934,+ | |||
|ontology_enrichment_celltype=CL:0000557!8.13e-60!71;CL:0000763!1.15e-58!112;CL:0000049!1.15e-58!112;CL:0000839!1.75e-55!70;CL:0000766!8.28e-55!76;CL:0002057!3.91e-52!42;CL:0000037!5.53e-50!172;CL:0000566!5.53e-50!172;CL:0002009!6.77e-49!65;CL:0002032!5.79e-48!165;CL:0000837!5.79e-48!165;CL:0000860!6.99e-48!45;CL:0000988!4.41e-46!182;CL:0002194!7.45e-46!63;CL:0000576!7.45e-46!63;CL:0000040!7.45e-46!63;CL:0000559!7.45e-46!63;CL:0000738!5.78e-45!140;CL:0002031!1.05e-40!124;CL:0002087!3.14e-35!119;CL:0000134!1.07e-14!358;CL:0002320!4.93e-14!365;CL:0002393!3.73e-13!9;CL:0002397!3.73e-13!9;CL:0002274!8.30e-12!5;CL:0000457!8.30e-12!5;CL:0002191!8.30e-12!5;CL:0000097!8.30e-12!5;CL:0000831!8.30e-12!5;CL:0002028!8.30e-12!5;CL:0000219!1.04e-11!390;CL:0000034!9.76e-10!444;CL:0000048!5.57e-09!430;CL:0000723!1.34e-08!436 | |||
|ontology_enrichment_celltype_v019=CL:0000097;4.15e-26;5!CL:0000473;3.32e-22;39!CL:0000234;3.32e-22;39!CL:0000766;4.66e-21;69!CL:0000860;1.32e-20;33!CL:0002057;1.32e-20;33!CL:0000576;6.72e-15;48!CL:0000163;2.14e-14;9!CL:0002393;3.67e-13;6!CL:0002397;3.67e-13;6!CL:0000763;2.06e-12;100!CL:0000235;5.77e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.35e-42,67;CL:0000839,7.12e-40,66;CL:0000766,2.35e-39,72;CL:0000473,2.37e-35,48;CL:0000234,2.37e-35,48;CL:0000763,7.40e-34,108;CL:0000049,7.40e-34,108;CL:0000860,4.41e-29,42;CL:0002057,4.41e-29,42;CL:0002194,2.25e-27,59;CL:0000576,2.25e-27,59;CL:0000040,2.25e-27,59;CL:0000559,2.25e-27,59;CL:0002009,2.40e-26,61;CL:0000097,3.77e-26,5;CL:0002028,3.77e-26,5;CL:0002032,1.17e-20,161;CL:0000837,1.17e-20,161;CL:0002031,1.44e-19,120;CL:0000037,1.56e-19,168;CL:0000738,2.95e-18,136;CL:0000988,3.22e-18,177;CL:0000163,2.03e-14,9;CL:0002087,5.21e-12,115;CL:0002393,8.14e-09,9;CL:0002397,8.14e-09,9;CL:0000235,7.60e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002057;3.73e-22;42!CL:0000049;3.14e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.72e-68!102;UBERON:0003061!8.72e-68!102;UBERON:0002193!5.18e-62!112;UBERON:0002371!2.15e-51!80;UBERON:0001474!9.36e-47!86;UBERON:0004765!3.13e-39!101;UBERON:0001434!3.13e-39!101;UBERON:0002405!2.00e-37!115;UBERON:0003081!3.84e-26!216;UBERON:0002204!9.51e-19!167;UBERON:0000178!1.64e-18!15;UBERON:0000179!1.64e-18!15;UBERON:0000463!1.64e-18!15;UBERON:0002384!3.95e-13!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.51e-21;15!UBERON:0000179;7.51e-21;15!UBERON:0000463;7.51e-21;15!UBERON:0002390;9.90e-11;32!UBERON:0002193;8.09e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.84e-51,98;UBERON:0003061,7.84e-51,98;UBERON:0002193,1.56e-45,108;UBERON:0002371,6.15e-37,76;UBERON:0001474,7.58e-34,82;UBERON:0004765,2.33e-30,90;UBERON:0002405,3.32e-29,93;UBERON:0001434,8.88e-27,100;UBERON:0003081,4.63e-21,203;UBERON:0000178,6.79e-21,15;UBERON:0000179,6.79e-21,15;UBERON:0000463,6.79e-21,15;UBERON:0002204,8.50e-14,167;UBERON:0000926,4.44e-11,315;UBERON:0004120,4.44e-11,315;UBERON:0006603,4.44e-11,315 | |||
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| ||
|short_description=p12@PARVB | |||
}} | }} |
Latest revision as of 02:15, 25 September 2015
Short description: | p12@PARVB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PARVB_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENST00000404989, uc003beo.2_5end |
EntrezGene: | PARVB |
HGNC: | 14653 |
UniProt: | B0QYM8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 1.35e-42 | 67 |
myeloid lineage restricted progenitor cell | 7.12e-40 | 66 |
myeloid leukocyte | 2.35e-39 | 72 |
defensive cell | 2.37e-35 | 48 |
phagocyte | 2.37e-35 | 48 |
myeloid cell | 7.40e-34 | 108 |
common myeloid progenitor | 7.40e-34 | 108 |
classical monocyte | 4.41e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.41e-29 | 42 |
monopoietic cell | 2.25e-27 | 59 |
monocyte | 2.25e-27 | 59 |
monoblast | 2.25e-27 | 59 |
promonocyte | 2.25e-27 | 59 |
macrophage dendritic cell progenitor | 2.40e-26 | 61 |
mast cell | 3.77e-26 | 5 |
basophil mast progenitor cell | 3.77e-26 | 5 |
hematopoietic oligopotent progenitor cell | 1.17e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.17e-20 | 161 |
hematopoietic lineage restricted progenitor cell | 1.44e-19 | 120 |
hematopoietic stem cell | 1.56e-19 | 168 |
leukocyte | 2.95e-18 | 136 |
hematopoietic cell | 3.22e-18 | 177 |
endocrine cell | 2.03e-14 | 9 |
nongranular leukocyte | 5.21e-12 | 115 |
intermediate monocyte | 8.14e-09 | 9 |
CD14-positive, CD16-positive monocyte | 8.14e-09 | 9 |
macrophage | 7.60e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.84e-51 | 98 |
blood island | 7.84e-51 | 98 |
hemolymphoid system | 1.56e-45 | 108 |
bone marrow | 6.15e-37 | 76 |
bone element | 7.58e-34 | 82 |
skeletal element | 2.33e-30 | 90 |
immune system | 3.32e-29 | 93 |
skeletal system | 8.88e-27 | 100 |
lateral plate mesoderm | 4.63e-21 | 203 |
blood | 6.79e-21 | 15 |
haemolymphatic fluid | 6.79e-21 | 15 |
organism substance | 6.79e-21 | 15 |
musculoskeletal system | 8.50e-14 | 167 |
mesoderm | 4.44e-11 | 315 |
mesoderm-derived structure | 4.44e-11 | 315 |
presumptive mesoderm | 4.44e-11 | 315 |