FFCP PHASE1:Hg19::chr14:65409484..65409495,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4554 | |HGNC=4554 | ||
|TSSclassifier=strong | |||
|UniProt=G3V4J6 | |UniProt=G3V4J6 | ||
|association_with_transcript=-20bp_to_ENST00000557323_5end | |association_with_transcript=-20bp_to_ENST00000557323_5end | ||
|cluster_id=chr14:65409484..65409495,- | |||
|description=CAGE_peak_2_at_GPX2_5end | |description=CAGE_peak_2_at_GPX2_5end | ||
|id=chr14:65409484..65409495,- | |id=chr14:65409484..65409495,- | ||
|ontology_enrichment_celltype=CL:0000223!3.81e-28!59;CL:0000066!1.85e-26!254;CL:0002076!1.68e-21!43;CL:0002368!6.18e-12!13;CL:0002251!2.70e-11!21;CL:0002159!8.92e-08!13;CL:0002202!1.27e-07!9;CL:0002632!1.27e-07!9;CL:0000181!2.44e-07!12;CL:0000417!2.44e-07!12;CL:0000668!2.44e-07!12;CL:0000414!2.44e-07!12;CL:0000412!2.44e-07!12;CL:0000182!2.44e-07!12;CL:0000244!7.41e-07!4;CL:0000731!7.41e-07!4 | |ontology_enrichment_celltype=CL:0000223!3.81e-28!59;CL:0000066!1.85e-26!254;CL:0002076!1.68e-21!43;CL:0002368!6.18e-12!13;CL:0002251!2.70e-11!21;CL:0002159!8.92e-08!13;CL:0002202!1.27e-07!9;CL:0002632!1.27e-07!9;CL:0000181!2.44e-07!12;CL:0000417!2.44e-07!12;CL:0000668!2.44e-07!12;CL:0000414!2.44e-07!12;CL:0000412!2.44e-07!12;CL:0000182!2.44e-07!12;CL:0000244!7.41e-07!4;CL:0000731!7.41e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002076;6.44e-20;42!CL:0002368;2.62e-15;13!CL:0002251;2.30e-14;20!CL:0000244;1.16e-09;4!CL:0000731;1.16e-09;4!CL:0000182;4.17e-09;12!CL:0002159;5.75e-09;14!CL:0002202;6.83e-09;9!CL:0002632;6.83e-09;9!CL:0002621;4.78e-08;3!CL:0002328;8.99e-08;3!CL:0000307;1.21e-07;3!CL:0000312;1.89e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,2.71e-32,58;CL:0002076,6.99e-25,42;CL:0000066,9.99e-23,253;CL:0002368,3.04e-15,13;CL:0002251,2.37e-14,20;CL:0000244,1.08e-09,4;CL:0000731,1.08e-09,4;CL:0000182,3.89e-09,12;CL:0002159,5.62e-09,14;CL:0002202,7.46e-09,9;CL:0002632,7.46e-09,9;CL:0002621,4.84e-08,3;CL:0002328,1.02e-07,3;CL:0000068,1.23e-07,3;CL:0000069,1.23e-07,3;CL:0000307,1.23e-07,3;CL:0000377,1.23e-07,3;CL:0000312,2.03e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000223;6.98e-17;58!UBERON:0009497;1.43e-10;13!UBERON:0004161;1.18e-09;11!UBERON:0006595;2.44e-08;86!CL:0000377;1.21e-07;3!UBERON:0001041;1.24e-07;30 | |||
|ontology_enrichment_disease=DOID:305!1.31e-18!106;DOID:0050687!6.14e-11!143;DOID:1749!6.33e-11!14 | |ontology_enrichment_disease=DOID:305!1.31e-18!106;DOID:0050687!6.14e-11!143;DOID:1749!6.33e-11!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;5.45e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.14e-11,106;DOID:1749,5.63e-08,14;DOID:0050687,4.18e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.65e-35!169;UBERON:0000925!1.65e-35!169;UBERON:0006595!1.65e-35!169;UBERON:0001007!1.87e-30!155;UBERON:0001555!1.87e-30!155;UBERON:0007026!1.87e-30!155;UBERON:0004921!3.14e-28!129;UBERON:0004185!3.14e-28!129;UBERON:0005911!3.71e-22!82;UBERON:0000077!1.51e-21!130;UBERON:0001041!5.99e-18!98;UBERON:0000466!2.31e-17!126;UBERON:0001004!8.74e-15!72;UBERON:0003929!3.00e-13!54;UBERON:0000065!5.27e-12!53;UBERON:0005177!7.80e-12!107;UBERON:0005153!1.94e-11!37;UBERON:0003101!3.50e-11!22;UBERON:0000079!3.50e-11!22;UBERON:0005178!5.92e-11!34;UBERON:0002224!5.92e-11!34;UBERON:0000464!8.98e-11!104;UBERON:0005181!1.75e-10!35;UBERON:0009497!2.86e-10!25;UBERON:0000015!2.86e-10!25;UBERON:0002423!2.86e-10!25;UBERON:0006235!2.86e-10!25;UBERON:0004161!2.86e-10!25;UBERON:0003135!7.37e-10!11;UBERON:0000161!7.67e-10!35;UBERON:0009854!1.04e-09!23;UBERON:0009856!2.61e-09!26;UBERON:0001048!3.53e-09!168;UBERON:0003104!4.14e-09!238;UBERON:0009142!4.14e-09!238;UBERON:0008835!7.84e-09!22;UBERON:0003894!7.84e-09!22;UBERON:0005156!9.36e-09!59;UBERON:0000990!9.36e-09!59;UBERON:0005157!1.46e-08!51;UBERON:0007499!1.77e-08!25;UBERON:0000481!1.89e-08!347;UBERON:0009569!1.96e-08!113;UBERON:0004807!2.47e-08!28;UBERON:0000072!3.83e-08!46;UBERON:0000344!4.19e-08!12;UBERON:0005409!5.44e-08!35;UBERON:0000062!6.63e-08!511;UBERON:0003729!2.21e-07!5;UBERON:0000473!3.48e-07!8;UBERON:0002048!3.83e-07!22;UBERON:0000117!3.83e-07!22;UBERON:0000171!3.83e-07!22;UBERON:0000170!3.83e-07!22;UBERON:0005597!3.83e-07!22;UBERON:0000118!3.83e-07!22;UBERON:0007196!3.91e-07!14;UBERON:0001558!3.91e-07!14;UBERON:0008947!5.30e-07!38;UBERON:0003258!5.30e-07!38 | |ontology_enrichment_uberon=UBERON:0004119!1.65e-35!169;UBERON:0000925!1.65e-35!169;UBERON:0006595!1.65e-35!169;UBERON:0001007!1.87e-30!155;UBERON:0001555!1.87e-30!155;UBERON:0007026!1.87e-30!155;UBERON:0004921!3.14e-28!129;UBERON:0004185!3.14e-28!129;UBERON:0005911!3.71e-22!82;UBERON:0000077!1.51e-21!130;UBERON:0001041!5.99e-18!98;UBERON:0000466!2.31e-17!126;UBERON:0001004!8.74e-15!72;UBERON:0003929!3.00e-13!54;UBERON:0000065!5.27e-12!53;UBERON:0005177!7.80e-12!107;UBERON:0005153!1.94e-11!37;UBERON:0003101!3.50e-11!22;UBERON:0000079!3.50e-11!22;UBERON:0005178!5.92e-11!34;UBERON:0002224!5.92e-11!34;UBERON:0000464!8.98e-11!104;UBERON:0005181!1.75e-10!35;UBERON:0009497!2.86e-10!25;UBERON:0000015!2.86e-10!25;UBERON:0002423!2.86e-10!25;UBERON:0006235!2.86e-10!25;UBERON:0004161!2.86e-10!25;UBERON:0003135!7.37e-10!11;UBERON:0000161!7.67e-10!35;UBERON:0009854!1.04e-09!23;UBERON:0009856!2.61e-09!26;UBERON:0001048!3.53e-09!168;UBERON:0003104!4.14e-09!238;UBERON:0009142!4.14e-09!238;UBERON:0008835!7.84e-09!22;UBERON:0003894!7.84e-09!22;UBERON:0005156!9.36e-09!59;UBERON:0000990!9.36e-09!59;UBERON:0005157!1.46e-08!51;UBERON:0007499!1.77e-08!25;UBERON:0000481!1.89e-08!347;UBERON:0009569!1.96e-08!113;UBERON:0004807!2.47e-08!28;UBERON:0000072!3.83e-08!46;UBERON:0000344!4.19e-08!12;UBERON:0005409!5.44e-08!35;UBERON:0000062!6.63e-08!511;UBERON:0003729!2.21e-07!5;UBERON:0000473!3.48e-07!8;UBERON:0002048!3.83e-07!22;UBERON:0000117!3.83e-07!22;UBERON:0000171!3.83e-07!22;UBERON:0000170!3.83e-07!22;UBERON:0005597!3.83e-07!22;UBERON:0000118!3.83e-07!22;UBERON:0007196!3.91e-07!14;UBERON:0001558!3.91e-07!14;UBERON:0008947!5.30e-07!38;UBERON:0003258!5.30e-07!38 | ||
|ontology_enrichment_uberon_v019=UBERON:0002423;2.92e-11;25!UBERON:0005911;8.31e-11;36!UBERON:0001007;4.24e-10;81!UBERON:0004807;2.32e-09;22!UBERON:0004921;2.49e-09;33!UBERON:0005409;5.19e-09;22!UBERON:0000486;7.71e-09;12!UBERON:0002107;1.16e-08;19!UBERON:0006925;1.16e-08;19!UBERON:0001555;1.70e-08;54!UBERON:0005178;2.38e-08;34!UBERON:0002224;2.38e-08;34!UBERON:0005181;3.60e-08;35!UBERON:0003929;4.49e-08;7!UBERON:0001949;4.78e-08;3!UBERON:0000485;6.81e-08;7!UBERON:0004815;8.99e-08;3!UBERON:0002031;8.99e-08;3!UBERON:0000344;9.58e-08;20!UBERON:0000365;1.03e-07;5!UBERON:0003350;5.20e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.49e-33,160;UBERON:0000925,3.49e-33,160;UBERON:0006595,3.49e-33,160;UBERON:0001007,2.56e-26,145;UBERON:0001555,2.56e-26,145;UBERON:0007026,2.56e-26,145;UBERON:0004921,1.42e-22,118;UBERON:0005911,3.18e-19,82;UBERON:0001041,8.94e-14,87;UBERON:0003929,4.80e-12,54;UBERON:0001004,9.14e-12,74;UBERON:0009497,2.71e-11,25;UBERON:0000015,2.71e-11,25;UBERON:0002423,2.71e-11,25;UBERON:0006235,2.71e-11,25;UBERON:0004161,2.71e-11,25;UBERON:0005177,1.17e-10,101;UBERON:0009854,2.70e-10,23;UBERON:0008835,4.18e-09,22;UBERON:0003894,4.18e-09,22;UBERON:0005178,6.12e-09,34;UBERON:0002224,6.12e-09,34;UBERON:0009856,8.17e-09,26;UBERON:0002107,1.10e-08,19;UBERON:0006925,1.10e-08,19;UBERON:0008836,1.10e-08,19;UBERON:0005181,1.35e-08,35;UBERON:0011216,1.67e-08,223;UBERON:0000065,4.29e-08,54;UBERON:0001949,4.84e-08,3;UBERON:0007499,9.51e-08,25;UBERON:0000365,9.65e-08,5;UBERON:0000344,9.76e-08,20;UBERON:0004815,1.02e-07,3;UBERON:0002031,1.02e-07,3;UBERON:0005409,1.03e-07,25;UBERON:0000161,1.05e-07,36;UBERON:0003350,5.03e-07,8;UBERON:0002365,6.88e-07,31;UBERON:0002330,6.88e-07,31;UBERON:0004807,7.33e-07,28 | |||
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| ||
|short_description=p2@GPX2 | |short_description=p2@GPX2 | ||
}} | }} |
Latest revision as of 02:33, 25 September 2015
Short description: | p2@GPX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GPX2_5end |
Coexpression cluster: | NA |
Association with transcript: | -20bp_to_ENST00000557323_5end |
EntrezGene: | NA |
HGNC: | 4554 |
UniProt: | G3V4J6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 2.71e-32 | 58 |
endo-epithelial cell | 6.99e-25 | 42 |
epithelial cell | 9.99e-23 | 253 |
respiratory epithelial cell | 3.04e-15 | 13 |
epithelial cell of alimentary canal | 2.37e-14 | 20 |
transitional epithelial cell | 1.08e-09 | 4 |
urothelial cell | 1.08e-09 | 4 |
hepatocyte | 3.89e-09 | 12 |
general ecto-epithelial cell | 5.62e-09 | 14 |
epithelial cell of tracheobronchial tree | 7.46e-09 | 9 |
epithelial cell of lower respiratory tract | 7.46e-09 | 9 |
gingival epithelial cell | 4.84e-08 | 3 |
bronchial epithelial cell | 1.02e-07 | 3 |
duct epithelial cell | 1.23e-07 | 3 |
branched duct epithelial cell | 1.23e-07 | 3 |
tracheal epithelial cell | 1.23e-07 | 3 |
tracheoblast | 1.23e-07 | 3 |
keratinocyte | 2.03e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.14e-11 | 106 |
squamous cell carcinoma | 5.63e-08 | 14 |
cell type cancer | 4.18e-07 | 143 |