FFCP PHASE1:Hg19::chr9:130548297..130548382,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:130548297..130548382,+ to FFCP PHASE1:Hg19::chr9:130548297..130548382,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1025 | |EntrezGene=1025 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1780 | |HGNC=1780 | ||
|TSSclassifier=strong | |||
|UniProt=P50750 | |UniProt=P50750 | ||
|association_with_transcript=0bp_to_ENST00000373264,ENST00000480353,NM_001261,uc004bse.2_5end | |||
|cluster_id=chr9:130548297..130548382,+ | |||
|description=CAGE_peak_1_at_CDK9_5end | |||
|id=chr9:130548297..130548382,+ | |||
|ontology_enrichment_celltype=CL:0000144!4.30e-33!625;CL:0000012!7.22e-33!682;CL:0000548!1.01e-31!679;CL:0000004!1.01e-31!679;CL:0000255!1.01e-31!679;CL:0002371!4.54e-30!591;CL:0000003!9.84e-29!722;CL:0000063!2.21e-22!578;CL:0000860!9.62e-20!45;CL:0002057!2.67e-19!42;CL:0000738!2.41e-18!140;CL:0000034!7.98e-16!444;CL:0002031!3.13e-15!124;CL:0000723!2.45e-14!436;CL:0000048!3.60e-14!430;CL:0002087!5.25e-14!119;CL:0000766!6.83e-14!76;CL:0000557!1.40e-13!71;CL:0000988!2.46e-13!182;CL:0000037!7.79e-13!172;CL:0000566!7.79e-13!172;CL:0002009!1.45e-12!65;CL:0002032!3.79e-12!165;CL:0000837!3.79e-12!165;CL:0000839!4.79e-12!70;CL:0002194!6.80e-12!63;CL:0000576!6.80e-12!63;CL:0000040!6.80e-12!63;CL:0000559!6.80e-12!63;CL:0002320!4.83e-11!365;CL:0000134!1.79e-10!358;CL:0000222!2.44e-10!119;CL:0000219!3.90e-09!390;CL:0000763!5.68e-09!112;CL:0000049!5.68e-09!112;CL:0002321!6.39e-08!248;CL:0000115!7.53e-08!35;CL:0000220!1.30e-07!246;CL:0000213!3.01e-07!57;CL:0000215!3.01e-07!57;CL:0002078!3.30e-07!44;CL:0002139!6.90e-07!24;CL:0000071!7.05e-07!18;CL:0002546!7.05e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.43e-15;33!CL:0002057;2.43e-15;33!CL:0000473;7.36e-11;39!CL:0000234;7.36e-11;39!CL:0000576;2.01e-09;48!CL:0000766;1.69e-07;69!CL:0000115;5.67e-07;36!CL:0002139;9.20e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.67e-19,42;CL:0002057,2.67e-19,42;CL:0000738,7.33e-18,136;CL:0000473,1.05e-16,48;CL:0000234,1.05e-16,48;CL:0002031,9.00e-15,120;CL:0000034,1.13e-14,441;CL:0002087,1.49e-13,115;CL:0000766,1.68e-13,72;CL:0000723,2.99e-13,433;CL:0000557,3.36e-13,67;CL:0000048,4.30e-13,427;CL:0000988,1.51e-12,177;CL:0000037,2.24e-12,168;CL:0002009,3.42e-12,61;CL:0002032,1.07e-11,161;CL:0000837,1.07e-11,161;CL:0000839,1.18e-11,66;CL:0002194,1.61e-11,59;CL:0000576,1.61e-11,59;CL:0000040,1.61e-11,59;CL:0000559,1.61e-11,59;CL:0000222,2.43e-10,121;CL:0002320,2.67e-10,361;CL:0000134,9.44e-10,354;CL:0000763,1.47e-08,108;CL:0000049,1.47e-08,108;CL:0000219,1.82e-08,386;CL:0000115,2.95e-08,36;CL:0002321,5.70e-08,250;CL:0000213,1.36e-07,58;CL:0000215,1.36e-07,58;CL:0002078,1.40e-07,45;CL:0002139,6.90e-07,24;CL:0000071,7.05e-07,18;CL:0002546,7.05e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;2.34e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!4.40e-19!216;UBERON:0002371!3.53e-15!80;UBERON:0002405!1.39e-12!115;UBERON:0001474!6.17e-12!86;UBERON:0002193!8.38e-12!112;UBERON:0002390!2.40e-11!102;UBERON:0003061!2.40e-11!102;UBERON:0002204!1.83e-10!167;UBERON:0002384!5.65e-10!375;UBERON:0004765!7.12e-10!101;UBERON:0001434!7.12e-10!101;UBERON:0000055!4.25e-07!69;UBERON:0002049!6.23e-07!79;UBERON:0007798!6.23e-07!79;UBERON:0001986!7.05e-07!18;UBERON:0004638!7.05e-07!18;UBERON:0004852!7.05e-07!18 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,6.01e-17,203;UBERON:0002371,8.70e-15,76;UBERON:0002405,1.66e-13,93;UBERON:0000926,8.84e-12,315;UBERON:0004120,8.84e-12,315;UBERON:0006603,8.84e-12,315;UBERON:0001474,1.62e-11,82;UBERON:0002193,2.29e-11,108;UBERON:0004765,4.07e-11,90;UBERON:0002390,6.48e-11,98;UBERON:0003061,6.48e-11,98;UBERON:0002204,1.01e-09,167;UBERON:0001434,2.52e-09,100;UBERON:0002384,2.85e-09,371;UBERON:0000055,3.29e-07,68;UBERON:0002049,4.99e-07,78;UBERON:0007798,4.99e-07,78;UBERON:0004638,7.05e-07,18;UBERON:0001986,7.05e-07,18;UBERON:0004852,7.05e-07,18 | |||
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| ||
|short_description=p1@CDK9 | |||
}} | }} |
Latest revision as of 05:22, 25 September 2015
Short description: | p1@CDK9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDK9_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000373264, ENST00000480353, NM_001261, uc004bse.2_5end |
EntrezGene: | CDK9 |
HGNC: | 1780 |
UniProt: | P50750 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 6.01e-17 | 203 |
bone marrow | 8.70e-15 | 76 |
immune system | 1.66e-13 | 93 |
mesoderm | 8.84e-12 | 315 |
mesoderm-derived structure | 8.84e-12 | 315 |
presumptive mesoderm | 8.84e-12 | 315 |
bone element | 1.62e-11 | 82 |
hemolymphoid system | 2.29e-11 | 108 |
skeletal element | 4.07e-11 | 90 |
hematopoietic system | 6.48e-11 | 98 |
blood island | 6.48e-11 | 98 |
musculoskeletal system | 1.01e-09 | 167 |
skeletal system | 2.52e-09 | 100 |
connective tissue | 2.85e-09 | 371 |
vessel | 3.29e-07 | 68 |
vasculature | 4.99e-07 | 78 |
vascular system | 4.99e-07 | 78 |
blood vessel endothelium | 7.05e-07 | 18 |
endothelium | 7.05e-07 | 18 |
cardiovascular system endothelium | 7.05e-07 | 18 |