FFCP PHASE1:Hg19::chr7:116165754..116165813,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=857 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1527 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000405348_5end | |||
|cluster_id=chr7:116165754..116165813,+ | |||
|description=CAGE_peak_5_at_CAV1_5end | |||
|id=chr7:116165754..116165813,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.33e-27!180;CL:0000057!2.12e-19!75;CL:0000680!2.31e-12!57;CL:0000056!2.31e-12!57;CL:0000355!2.31e-12!57;CL:0000187!6.54e-11!54;CL:0000136!4.20e-10!15;CL:0000183!1.66e-09!59;CL:0000393!1.96e-09!60;CL:0000211!1.96e-09!60;CL:0002620!4.19e-09!23;CL:0000192!6.43e-09!42;CL:0000514!6.43e-09!42;CL:0000222!1.97e-08!119;CL:0000359!9.83e-08!32;CL:0000220!2.01e-07!246;CL:0002334!3.74e-07!12;CL:0002321!3.90e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.94e-10;13!CL:0002620;1.03e-09;23!CL:0000057;1.46e-08;73!CL:0002334;4.77e-08;12!CL:0002320;1.12e-07;188!CL:0000359;1.83e-07;32!CL:0000192;2.18e-07;43!CL:0000134;2.59e-07;55!CL:0000187;4.24e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.14e-21,76;CL:0000680,2.89e-13,58;CL:0000056,2.89e-13,58;CL:0000355,2.89e-13,58;CL:0000187,1.25e-11,55;CL:0000136,1.84e-11,15;CL:0002620,7.59e-10,23;CL:0000192,3.68e-09,43;CL:0000514,3.68e-09,43;CL:0000393,6.15e-09,61;CL:0000211,6.15e-09,61;CL:0000359,4.23e-08,32;CL:0002334,4.79e-08,12;CL:0000222,1.80e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;2.18e-07;43!CL:0000355;3.02e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.61e-16!83;UBERON:0002329!4.61e-16!83;UBERON:0003077!4.61e-16!83;UBERON:0003059!4.61e-16!83;UBERON:0007282!4.61e-16!83;UBERON:0009618!4.61e-16!83;UBERON:0007285!4.61e-16!83;UBERON:0004290!2.62e-13!70;UBERON:0003102!2.12e-12!95;UBERON:0002100!2.78e-12!216;UBERON:0000486!3.45e-12!82;UBERON:0002385!1.30e-11!63;UBERON:0001015!1.30e-11!63;UBERON:0000383!1.30e-11!63;UBERON:0001134!1.38e-11!61;UBERON:0002036!1.38e-11!61;UBERON:0003082!1.38e-11!61;UBERON:0004872!3.83e-11!84;UBERON:0005256!5.26e-11!143;UBERON:0003104!6.31e-10!238;UBERON:0009142!6.31e-10!238;UBERON:0000468!1.98e-09!659;UBERON:0000475!5.71e-09!365;UBERON:0001637!2.14e-08!42;UBERON:0003509!2.14e-08!42;UBERON:0004572!2.14e-08!42;UBERON:0000481!4.69e-08!347;UBERON:0004573!6.45e-08!33;UBERON:0004571!6.45e-08!33;UBERON:0001981!6.78e-08!60;UBERON:0007500!6.78e-08!60;UBERON:0004537!6.78e-08!60;UBERON:0006965!6.78e-08!60;UBERON:0002199!6.78e-08!45;UBERON:0002416!6.78e-08!45;UBERON:0007100!8.20e-08!27;UBERON:0000055!1.06e-07!69;UBERON:0002049!1.63e-07!79;UBERON:0007798!1.63e-07!79;UBERON:0000490!3.76e-07!138;UBERON:0000948!7.94e-07!24;UBERON:0005498!7.94e-07!24;UBERON:0004140!7.94e-07!24;UBERON:0009881!7.94e-07!24;UBERON:0004141!7.94e-07!24;UBERON:0003084!7.94e-07!24;UBERON:0007005!7.94e-07!24;UBERON:0004139!7.94e-07!24;UBERON:0004291!7.94e-07!24;UBERON:0001009!9.44e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.69e-07;25!UBERON:0002384;2.10e-07;198!UBERON:0004573;8.84e-07;33!UBERON:0004571;8.84e-07;33!UBERON:0002385;9.49e-07;31!UBERON:0001015;9.49e-07;31!UBERON:0000383;9.49e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,5.09e-14,71;UBERON:0003059,5.09e-14,71;UBERON:0007282,5.09e-14,71;UBERON:0004290,5.09e-14,71;UBERON:0009618,5.09e-14,71;UBERON:0007524,8.80e-14,73;UBERON:0003077,1.57e-13,72;UBERON:0007285,1.57e-13,72;UBERON:0007503,1.09e-12,78;UBERON:0000486,1.71e-12,83;UBERON:0001134,4.80e-12,62;UBERON:0002036,4.80e-12,62;UBERON:0003082,4.80e-12,62;UBERON:0002385,6.89e-12,64;UBERON:0001015,6.89e-12,64;UBERON:0000383,6.89e-12,64;UBERON:0003102,2.68e-11,99;UBERON:0005256,1.27e-09,122;UBERON:0004872,1.90e-09,83;UBERON:0002100,1.21e-08,199;UBERON:0003104,1.73e-08,160;UBERON:0009142,1.73e-08,160;UBERON:0002199,2.73e-08,46;UBERON:0002416,2.73e-08,46;UBERON:0007100,3.91e-08,27;UBERON:0001637,1.19e-07,42;UBERON:0003509,1.19e-07,42;UBERON:0004572,1.19e-07,42;UBERON:0004923,1.35e-07,66;UBERON:0004573,1.49e-07,33;UBERON:0004571,1.49e-07,33;UBERON:0000948,5.17e-07,24;UBERON:0005498,5.17e-07,24;UBERON:0004140,5.17e-07,24;UBERON:0009881,5.17e-07,24;UBERON:0004141,5.17e-07,24;UBERON:0003084,5.17e-07,24;UBERON:0007005,5.17e-07,24;UBERON:0004139,5.17e-07,24;UBERON:0004291,5.17e-07,24;UBERON:0000926,9.26e-07,315;UBERON:0004120,9.26e-07,315;UBERON:0006603,9.26e-07,315 | |||
|phase1_expression=13.6258784452917,11.3473277662221,10.7125347112938,9.00659685178174,7.15137751083661,13.9574163856059,5.06599756336621,8.84407822797563,3.3954131665979,2.94880723801811,2.09340350391728,1.96597234917155,1.31883489114227,8.53987835424322,7.62213964174206,2.01697543935533,5.42425075221579,3.65155045193687,5.85519358548608,1.72369481307503,1.83600622119828,0.626909442956176,0.572471974262113,1.64249310087461,0.502170558379211,0.229240217243854,0.0821005894499457,0,0,0,0.154816123316076,2.75826367343678,0.90361775633475,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,12.1903433156981,0,4.98663991189768,10.1202962667679,11.0294340339896,11.2980284789442,3.1811437882044,3.89307896242109,0.945348171640679,1.10864698731282,0.43917392846563,3.47094550068939,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0.596287222100115,0.860234595106124,1.38856200643038,1.69592382577203,0.419499436209906,0.550236083880135,1.25396979922086,1.8089173141853,1.06729878806013,0.66944122552934,0.402829317109147,0.760272105718513,2.4406205754817,1.10298924103761,0,0.714397826272638,0.898117490504679,0.563057402416611,0,0,1.46561395144326,0,0,0.872188104285069,8.94549513051573,5.82500353657067,6.75286822147416,4.87622255272983,4.61068896857864,3.36406560085384,4.2699598291882,4.19334832309172,6.84664277879486,1.21239604862719,1.47115712802113,0.756787138224657,2.30470369792,0.234321431833797,4.68240115245481,3.4228309292667,5.38015249986484,2.3486899728753,4.85618833104395,1.96631129383148,4.49139176760765,3.4393608847295,6.30287265172169,2.37600571456411,6.18167323196392,1.82032272387605,0.718618141816238,2.18836948140286,1.7516592782075,6.09541054065202,7.02364193409341,4.29082914118628,6.76071265079686,2.49550802952046,3.7671823494661,13.4541154955697,13.3517097730524,5.70173082560364,11.2327256869898,4.3798891807757,9.30584281657949,4.21940830603166,9.25651549031387,5.04867548488229,15.9246324651178,3.71785930683267,8.87523981291536,8.56392834934942,4.91725717700414,1.93260853163297,0.818238361772504,2.29443676311203,0.121973706129595,0,0.116193942869518,0.10366105501537,0.252320850875628,0.72995471815166,1.56449532329816,3.21620469096443,1.38134921352481,9.75172648867156,16.6032280784005,2.12952240071719,2.52877035117153,2.16909926895134,2.75734931830985,3.05031221729369,2.13543557199987,2.83145747136345,1.76599318612811,1.53898862778556,0,0,2.4694440679884,0,1.26755034821831,0,0.590789906681404,0,0.122988438543114,2.40194934417936,0.98775256867763,1.1240175325762,0.703702806881416,1.01847289674383,0.325808305310325,3.11980435583874,2.88662684050547,0.927443239800615,2.93521735589554,0.577465791044295,0.925971025153221,1.90254152234598,1.58040879591855,3.43394464837949,0,0,0,0.93733833986777,2.18376766658517,1.70130116690864,3.04498977189684,2.03443756959773,2.30029607499127,0,0,0.414656231081544,0.144119953416961,0.12624243342638,0,0,1.17217447210047,0,0.308482478109971,0,0,0.448524337381443,0,1.0267360014933,2.71470603091333,3.57656445851882,1.690605505112,5.58470044828228,5.2003718455683,1.28603687131071,5.67396528093113,0.799266537048298,2.00169191121407,0,0.823240336780769,1.62868092146868,1.77695974371273,0,3.91871190177462,2.61460037580088,2.89921674427965,0,0,0,6.70949595376431,8.04033550838797,5.70547620162874,12.1616297600767,10.2738161275192,8.41586527227509,0,0,0,0,0.254094624222463,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,4.66227668532732,3.00102312635806,7.05289061619313,11.0224556611328,11.4194552830184,11.5122762974772,18.7426263988341,6.62081419400982,2.27407504055985,5.17365356462525,3.98535359121262,7.19039757312642,5.64743494042539,0,0,0,0,0,1.81876542867756,3.32870879020994,1.20956117331872,10.1724201205699,7.82656063769118,8.41980283299221,12.1732191792916,9.21073048320066,7.88184213603677,7.42090332224955,5.39733928309294,4.79416658345443,6.24166385704949,4.15403543346897,6.8564123291376,0.120859449591622,2.80709058424599,1.47329582297434,3.3296189967736,7.4657378882754,5.24497659837697,0.451199612907412,0.924184045252977,0,0,0.527758144464379,0,1.02056223165909,1.29549549661284,0,1.08378575017541,0.501689773854853,1.27438136522519,0,0,0,0,0,0,0.325378394664303,7.10982980369284,0.0915694648183434,0.082509499920588,0.574265537996172,0,12.8547143875328,2.22342652071881,3.08097234229289,3.99109554287937,2.61889487720608,2.68550612170684,3.19036726611303,2.81247870473133,1.95870478422822,0.661139661443912,1.53752053892085,0.382838137483752,0.809262246844399,15.8047486761077,11.9628691795643,4.1822236209636,2.46426864140871,2.12922412126809,11.3091288969759,3.33583594387056,5.58187058293766,0,1.58189712359363,2.85945290885737,2.303080121802,8.55877976067841,2.86382923133343,3.13979456079692,3.23770423649967,2.19629623788844,0.824686816419805,0.606547444719948,6.34041284692033,0.842516912477962,0.97526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| |||
|short_description=p5@CAV1 | |||
}} |
Latest revision as of 07:28, 25 September 2015
Short description: | p5@CAV1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CAV1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000405348_5end |
EntrezGene: | CAV1 |
HGNC: | 1527 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.14e-21 | 76 |
muscle precursor cell | 2.89e-13 | 58 |
myoblast | 2.89e-13 | 58 |
multi-potent skeletal muscle stem cell | 2.89e-13 | 58 |
muscle cell | 1.25e-11 | 55 |
fat cell | 1.84e-11 | 15 |
skin fibroblast | 7.59e-10 | 23 |
smooth muscle cell | 3.68e-09 | 43 |
smooth muscle myoblast | 3.68e-09 | 43 |
electrically responsive cell | 6.15e-09 | 61 |
electrically active cell | 6.15e-09 | 61 |
vascular associated smooth muscle cell | 4.23e-08 | 32 |
preadipocyte | 4.79e-08 | 12 |
mesodermal cell | 1.80e-07 | 121 |