FFCP PHASE1:Mm9::chr7:104548559..104548625,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:104548559..104548625,+
|short_description=p1@LOC635087,p1@LOC675851,p1@Ndufc2
|description=CAGE_peak_1_at_LOC635087_5end,CAGE_peak_1_at_LOC675851_5end,CAGE_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=635087,675851,68197 | |EntrezGene=635087,675851,68197 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=282 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000149122_5end | |||
|cluster_id=chr7:104548559..104548625,+ | |||
|description=CAGE_peak_1_at_LOC635087_5end,CAGE_peak_1_at_LOC675851_5end,CAGE_peak_1_at_Ndufc2_5end | |||
|id=chr7:104548559..104548625,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.36e-08!73;UBERON:0005743!1.36e-08!73;UBERON:0001049!2.98e-08!52;UBERON:0005068!2.98e-08!52;UBERON:0006241!2.98e-08!52;UBERON:0007135!2.98e-08!52;UBERON:0000025!3.85e-08!114;UBERON:0000073!6.06e-08!75;UBERON:0001016!6.06e-08!75;UBERON:0002020!2.35e-07!34;UBERON:0003103!4.45e-07!43;UBERON:0000955!6.06e-07!50;UBERON:0006238!6.06e-07!50;UBERON:0004111!6.23e-07!122;UBERON:0002616!7.39e-07!49;UBERON:0007100!7.91e-07!18;UBERON:0000948!7.91e-07!18;UBERON:0005498!7.91e-07!18;UBERON:0004140!7.91e-07!18;UBERON:0009881!7.91e-07!18;UBERON:0004141!7.91e-07!18;UBERON:0003084!7.91e-07!18;UBERON:0007005!7.91e-07!18;UBERON:0004139!7.91e-07!18;UBERON:0004291!7.91e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,9.60e-11,92;UBERON:0001017,1.36e-08,73;UBERON:0001049,2.98e-08,52;UBERON:0005068,2.98e-08,52;UBERON:0006241,2.98e-08,52;UBERON:0007135,2.98e-08,52;UBERON:0000025,3.85e-08,114;UBERON:0000073,5.37e-08,54;UBERON:0001016,6.06e-08,75;UBERON:0002020,2.35e-07,34;UBERON:0003103,4.45e-07,43;UBERON:0000955,5.25e-07,47;UBERON:0006238,5.25e-07,47;UBERON:0004111,6.23e-07,122;UBERON:0002616,6.37e-07,46;UBERON:0007100,7.91e-07,18;UBERON:0000948,7.91e-07,18;UBERON:0005498,7.91e-07,18;UBERON:0004140,7.91e-07,18;UBERON:0009881,7.91e-07,18;UBERON:0004141,7.91e-07,18;UBERON:0003084,7.91e-07,18;UBERON:0007005,7.91e-07,18;UBERON:0004139,7.91e-07,18;UBERON:0004291,7.91e-07,18 | |||
|phase1_expression=171.679564096339,162.273564552303,133.769776380524,119.775827677505,102.182728909055,137.157365152014,170.770840275329,93.7435328185844,42.7997715341067,26.4492914743853,210.25566498092,147.578494141372,98.4404197104433,79.3777253964496,178.546832333195,164.612392387929,204.272068413419,115.459152521115,115.450353096032,112.03886807468,167.960498048363,241.078429515749,321.014540851752,248.148247752574,249.826707082148,236.009337251273,270.949295584058,226.675736785555,320.18946178399,276.981112606164,347.895171218173,95.2546010189447,83.033746323917,63.3926724061755,361.353376308844,481.083063667477,366.075655778428,113.422071929702,196.115171475474,160.198265655982,84.7053342764661,100.407686288892,99.5296223713865,142.89288840228,148.922711961467,178.407443101154,642.34329370974,765.268298895367,480.014309274821,607.010144909913,336.807330430622,763.326116777999,92.9515637559859,66.7333170650437,78.6459489993366,174.936416504444,173.639264602887,210.909885741474,332.405945192319,347.018082402454,439.878994033288,332.067641427749,363.721571609456,414.403819808084,533.987835786166,474.600716783995,527.296194512392,825.685138136021,307.232321270019,320.369091661102,336.30961320086,436.189053184608,414.570251366179,300.714912072712,291.945304721548,375.960483723499,263.176955588539,231.624831286531,240.701437612534,317.714067142037,324.323696570542,270.354039318958,375.780316655859,337.657566019008,295.511811200351,300.521157183141,269.509591752702,304.763093924366,153.269815306365,188.248756226003,157.686281853713,397.515831165401,312.786813505565,276.8677373102,508.125158444077,496.413790903848,265.580398469143,185.428190964927,207.569017677692,248.044381306259,203.800428416857,80.8456807710202,7.64415719119937,21.3320010945999,351.797941643223,291.870565027314,305.842289233944,244.581870358226,101.762588273338,197.873371373411,227.61274871717,257.577794652071,274.663057231966,286.975907612193,209.778253530097,337.666130902838,78.8551947072653,740.493306786868,126.499308928832,263.679965414277,259.267942672502,199.283729038576,214.35052540084,274.628387596831,253.639961951094,244.983315945039,327.215105025668,503.318391303469,302.554210660967,309.767042289173,254.827835769975,294.533801352554,290.460439041294,297.397076875174,298.591420032088,299.497371623081,165.590805620614,182.878246796837,306.04726046318,194.237832983215,173.190309583359,228.062887598005,212.473313170312,179.489438042337,149.680298132921,158.476671992359,184.873502556345,197.649375244608,211.472201067118,160.172849902143,163.458594348308,198.81052931181,140.135813609701,149.748431604532,155.982859397221,176.543394668003,403.070369517797,397.34516858512,245.801426977188,300.746621721549,327.867431853572,404.779514164361,334.520311381902,418.911049390223,498.282774626232,544.594498605455,487.452770343108,514.468098469749,589.288822540174,586.570349154607,539.837202765853,591.67134911032,616.716273852561,544.609647329589,283.260560715879,297.908852838028,226.997703909869,174.537373997939,175.962806691568,163.262380317888,168.816374331942,210.55759970677,219.931885362577,250.907600842466,218.283368310475,235.190107345888,222.180324579438,211.092816835661,192.039625812333,165.382771192377,251.152413954395,209.098336917086,362.265690820386,184.397099352102,180.332377076929,227.682184531061,231.579269678145,221.769462493187,250.100504326438,370.058640984863,429.862516829684,487.172003163268,330.248226575084,176.188431636195,185.551691386864,180.114552020268,175.879725243832,178.953452536293,194.534150761005,198.510334841059,187.752592605491,256.16579850448,115.014565221884,253.055844414582,247.445874779847,309.661704363159,351.618930502948,395.603687517961,179.949607222273,223.031391653861,173.394734934316,186.210359095381,180.946181430435,180.906758037161,211.144709465894,223.232893149322,144.709062289483,143.730583582055,137.768920120069,157.144918812393,182.009970886654,189.634915800362,248.805618499799,384.541318459828,621.098276823043,542.215706488799,322.706685875462,339.210620997836,162.951335704415,469.848395527338,225.588376882624,242.072021463916,201.851723675633,198.344102300618,188.042080925541,161.919775611212,180.950383648678,187.04374906324,177.484212297989,279.549545286972,178.986447447627,234.156268822441,182.596281435359,189.385701172471,118.143173122567,203.935734370184,262.114523888439,217.650262038306,191.650928479622,162.633193262338,172.88852812954,144.686424332047,172.90122851659,152.013680567127,125.448144204249,130.982139925197,177.709474203477,170.697917141682,212.2776000875,205.549216595297,203.054567520403,245.257124202847,288.783531156722,272.191664508452,131.885499931805,139.17367055753,191.859706307817,159.609892847353,161.625891122601,177.380312213706,154.109696108049,136.893510387381,193.251794685591,311.885357981677,116.704811584933,160.77537014335,156.304181100037,138.450815898448,108.808605265936,122.167544492283,186.976272993241,159.264752744323,160.311969613132,286.401185404534,171.137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|phase1_expression=171.679564096339,162.273564552303,133.769776380524,119.775827677505,102.182728909055,137.157365152014,170.770840275329,93.7435328185844,42.7997715341067,26.4492914743853,210.25566498092,147.578494141372,98.4404197104433,79.3777253964496,178.546832333195,164.612392387929,204.272068413419,115.459152521115,115.450353096032,112.03886807468,167.960498048363,241.078429515749,321.014540851752,248.148247752574,249.826707082148,236.009337251273,270.949295584058,226.675736785555,320.18946178399,276.981112606164,347.895171218173,95.2546010189447,83.033746323917,63.3926724061755,361.353376308844,481.083063667477,366.075655778428,113.422071929702,196.115171475474,160.198265655982,84.7053342764661,100.407686288892,99.5296223713865,142.89288840228,148.922711961467,178.407443101154,642.34329370974,765.268298895367,480.014309274821,607.010144909913,336.807330430622,763.326116777999,92.9515637559859,66.7333170650437,78.6459489993366,174.936416504444,173.639264602887,210.909885741474,332.405945192319,347.018082402454,439.878994033288,332.067641427749,363.721571609456,414.403819808084,533.987835786166,474.600716783995,527.296194512392,825.685138136021,307.232321270019,320.369091661102,336.30961320086,436.189053184608,414.570251366179,300.714912072712,291.945304721548,375.960483723499,263.176955588539,231.624831286531,240.701437612534,317.714067142037,324.323696570542,270.354039318958,375.780316655859,337.657566019008,295.511811200351,300.521157183141,269.509591752702,304.763093924366,153.269815306365,188.248756226003,157.686281853713,397.515831165401,312.786813505565,276.8677373102,508.125158444077,496.413790903848,265.580398469143,185.428190964927,207.569017677692,248.044381306259,203.800428416857,80.8456807710202,7.64415719119937,21.3320010945999,351.797941643223,291.870565027314,305.842289233944,244.581870358226,101.762588273338,197.873371373411,227.61274871717,257.577794652071,274.663057231966,286.975907612193,209.778253530097,337.666130902838,78.8551947072653,740.493306786868,126.499308928832,263.679965414277,259.267942672502,199.283729038576,214.35052540084,274.628387596831,253.639961951094,244.983315945039,327.215105025668,503.318391303469,302.554210660967,309.767042289173,254.827835769975,294.533801352554,290.460439041294,297.397076875174,298.591420032088,299.497371623081,165.590805620614,182.878246796837,306.04726046318,194.237832983215,173.190309583359,228.062887598005,212.473313170312,179.489438042337,149.680298132921,158.476671992359,184.873502556345,197.649375244608,211.472201067118,160.172849902143,163.458594348308,198.81052931181,140.135813609701,149.748431604532,155.982859397221,176.543394668003,403.070369517797,397.34516858512,245.801426977188,300.746621721549,327.867431853572,404.779514164361,334.520311381902,418.911049390223,498.282774626232,544.594498605455,487.452770343108,514.468098469749,589.288822540174,586.570349154607,539.837202765853,591.67134911032,616.716273852561,544.609647329589,283.260560715879,297.908852838028,226.997703909869,174.537373997939,175.962806691568,163.262380317888,168.816374331942,210.55759970677,219.931885362577,250.907600842466,218.283368310475,235.190107345888,222.180324579438,211.092816835661,192.039625812333,165.382771192377,251.152413954395,209.098336917086,362.265690820386,184.397099352102,180.332377076929,227.682184531061,231.579269678145,221.769462493187,250.100504326438,370.058640984863,429.862516829684,487.172003163268,330.248226575084,176.188431636195,185.551691386864,180.114552020268,175.879725243832,178.953452536293,194.534150761005,198.510334841059,187.752592605491,256.16579850448,115.014565221884,253.055844414582,247.445874779847,309.661704363159,351.618930502948,395.603687517961,179.949607222273,223.031391653861,173.394734934316,186.210359095381,180.946181430435,180.906758037161,211.144709465894,223.232893149322,144.709062289483,143.730583582055,137.768920120069,157.144918812393,182.009970886654,189.634915800362,248.805618499799,384.541318459828,621.098276823043,542.215706488799,322.706685875462,339.210620997836,162.951335704415,469.848395527338,225.588376882624,242.072021463916,201.851723675633,198.344102300618,188.042080925541,161.919775611212,180.950383648678,187.04374906324,177.484212297989,279.549545286972,178.986447447627,234.156268822441,182.596281435359,189.385701172471,118.143173122567,203.935734370184,262.114523888439,217.650262038306,191.650928479622,162.633193262338,172.88852812954,144.686424332047,172.90122851659,152.013680567127,125.448144204249,130.982139925197,177.709474203477,170.697917141682,212.2776000875,205.549216595297,203.054567520403,245.257124202847,288.783531156722,272.191664508452,131.885499931805,139.17367055753,191.859706307817,159.609892847353,161.625891122601,177.380312213706,154.109696108049,136.893510387381,193.251794685591,311.885357981677,116.704811584933,160.77537014335,156.304181100037,138.450815898448,108.808605265936,122.167544492283,186.976272993241,159.264752744323,160.311969613132,286.401185404534,171.137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| ||
|short_description=p1@LOC635087,p1@LOC675851,p1@Ndufc2 | |||
}} | }} |
Latest revision as of 13:36, 25 September 2015
Short description: | p1@LOC635087, p1@LOC675851, p1@Ndufc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LOC635087_5end, CAGE_peak_1_at_LOC675851_5end, CAGE_peak_1_at_Ndufc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:282 |
Association with transcript: | 0bp_to_ENSMUST00000149122_5end |
EntrezGene: | 635087,675851,68197 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 9.60e-11 | 92 |
central nervous system | 1.36e-08 | 73 |
neural tube | 2.98e-08 | 52 |
neural rod | 2.98e-08 | 52 |
future spinal cord | 2.98e-08 | 52 |
neural keel | 2.98e-08 | 52 |
tube | 3.85e-08 | 114 |
regional part of nervous system | 5.37e-08 | 54 |
nervous system | 6.06e-08 | 75 |
gray matter | 2.35e-07 | 34 |
compound organ | 4.45e-07 | 43 |
brain | 5.25e-07 | 47 |
future brain | 5.25e-07 | 47 |
anatomical conduit | 6.23e-07 | 122 |
regional part of brain | 6.37e-07 | 46 |
primary circulatory organ | 7.91e-07 | 18 |
heart | 7.91e-07 | 18 |
primitive heart tube | 7.91e-07 | 18 |
primary heart field | 7.91e-07 | 18 |
anterior lateral plate mesoderm | 7.91e-07 | 18 |
heart tube | 7.91e-07 | 18 |
heart primordium | 7.91e-07 | 18 |
cardiac mesoderm | 7.91e-07 | 18 |
cardiogenic plate | 7.91e-07 | 18 |
heart rudiment | 7.91e-07 | 18 |