FFCP PHASE1:Mm9::chr5:137384000..137384044,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67286 | |EntrezGene=67286 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=346 | |MCL_coexpression_id=346 | ||
|TSSclassifier=NA | |||
|UniProt=Q9DAI2 | |UniProt=Q9DAI2 | ||
|association_with_transcript=0bp_to_ENSMUST00000008131,NM_026073,uc009abc.1_5end | |association_with_transcript=0bp_to_ENSMUST00000008131,NM_026073,uc009abc.1_5end | ||
|cluster_id=chr5:137384000..137384044,+ | |||
|description=CAGE_peak_1_at_Rabl5_5end | |description=CAGE_peak_1_at_Rabl5_5end | ||
|id=chr5:137384000..137384044,+ | |id=chr5:137384000..137384044,+ | ||
|ontology_enrichment_celltype=CL:0000221!1.55e-13!44;CL:0000133!1.55e-13!44;CL:0002319!3.11e-13!43;CL:0000055!1.67e-12!50;CL:0002321!2.12e-11!70;CL:0000220!2.12e-11!70;CL:0000117!3.81e-09!23;CL:0000337!3.81e-09!23;CL:0000393!1.22e-08!39;CL:0000211!1.22e-08!39;CL:0000540!1.62e-08!33;CL:0000047!1.62e-08!33;CL:0000031!1.62e-08!33;CL:0000404!1.62e-08!33 | |ontology_enrichment_celltype=CL:0000221!1.55e-13!44;CL:0000133!1.55e-13!44;CL:0002319!3.11e-13!43;CL:0000055!1.67e-12!50;CL:0002321!2.12e-11!70;CL:0000220!2.12e-11!70;CL:0000117!3.81e-09!23;CL:0000337!3.81e-09!23;CL:0000393!1.22e-08!39;CL:0000211!1.22e-08!39;CL:0000540!1.62e-08!33;CL:0000047!1.62e-08!33;CL:0000031!1.62e-08!33;CL:0000404!1.62e-08!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.55e-13,44;CL:0000133,1.55e-13,44;CL:0002319,3.11e-13,43;CL:0002321,2.12e-11,70;CL:0000117,3.81e-09,23;CL:0000337,3.81e-09,23;CL:0000393,1.22e-08,39;CL:0000211,1.22e-08,39;CL:0000540,1.62e-08,33;CL:0000047,1.62e-08,33;CL:0000031,1.62e-08,33;CL:0000404,1.62e-08,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.03e-28!75;UBERON:0001016!2.03e-28!75;UBERON:0001017!3.81e-28!73;UBERON:0005743!3.81e-28!73;UBERON:0000955!6.19e-23!50;UBERON:0006238!6.19e-23!50;UBERON:0001049!8.59e-23!52;UBERON:0005068!8.59e-23!52;UBERON:0006241!8.59e-23!52;UBERON:0007135!8.59e-23!52;UBERON:0002616!1.66e-22!49;UBERON:0000033!1.95e-22!63;UBERON:0004121!3.78e-22!102;UBERON:0000924!3.78e-22!102;UBERON:0006601!3.78e-22!102;UBERON:0002346!1.21e-20!71;UBERON:0003075!1.21e-20!71;UBERON:0007284!1.21e-20!71;UBERON:0003080!1.24e-17!40;UBERON:0002780!4.46e-17!39;UBERON:0001890!4.46e-17!39;UBERON:0006240!4.46e-17!39;UBERON:0003056!1.05e-16!49;UBERON:0002020!1.02e-14!34;UBERON:0002791!2.60e-13!29;UBERON:0003528!2.60e-13!29;UBERON:0001893!2.60e-13!29;UBERON:0000956!9.22e-10!21;UBERON:0001869!9.22e-10!21;UBERON:0000203!9.22e-10!21;UBERON:0002619!9.71e-09!17;UBERON:0007811!1.17e-08!86;UBERON:0000153!2.69e-07!94 | |ontology_enrichment_uberon=UBERON:0000073!2.03e-28!75;UBERON:0001016!2.03e-28!75;UBERON:0001017!3.81e-28!73;UBERON:0005743!3.81e-28!73;UBERON:0000955!6.19e-23!50;UBERON:0006238!6.19e-23!50;UBERON:0001049!8.59e-23!52;UBERON:0005068!8.59e-23!52;UBERON:0006241!8.59e-23!52;UBERON:0007135!8.59e-23!52;UBERON:0002616!1.66e-22!49;UBERON:0000033!1.95e-22!63;UBERON:0004121!3.78e-22!102;UBERON:0000924!3.78e-22!102;UBERON:0006601!3.78e-22!102;UBERON:0002346!1.21e-20!71;UBERON:0003075!1.21e-20!71;UBERON:0007284!1.21e-20!71;UBERON:0003080!1.24e-17!40;UBERON:0002780!4.46e-17!39;UBERON:0001890!4.46e-17!39;UBERON:0006240!4.46e-17!39;UBERON:0003056!1.05e-16!49;UBERON:0002020!1.02e-14!34;UBERON:0002791!2.60e-13!29;UBERON:0003528!2.60e-13!29;UBERON:0001893!2.60e-13!29;UBERON:0000956!9.22e-10!21;UBERON:0001869!9.22e-10!21;UBERON:0000203!9.22e-10!21;UBERON:0002619!9.71e-09!17;UBERON:0007811!1.17e-08!86;UBERON:0000153!2.69e-07!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.03e-28,75;UBERON:0001017,3.80e-28,73;UBERON:0000073,4.05e-24,54;UBERON:0001049,8.58e-23,52;UBERON:0005068,8.58e-23,52;UBERON:0006241,8.58e-23,52;UBERON:0007135,8.58e-23,52;UBERON:0004121,1.01e-22,95;UBERON:0000924,1.01e-22,95;UBERON:0006601,1.01e-22,95;UBERON:0002346,8.63e-22,64;UBERON:0003075,8.63e-22,64;UBERON:0007284,8.63e-22,64;UBERON:0000955,4.89e-21,47;UBERON:0006238,4.89e-21,47;UBERON:0002616,1.28e-20,46;UBERON:0010371,1.07e-17,73;UBERON:0003080,1.24e-17,40;UBERON:0002780,4.45e-17,39;UBERON:0001890,4.45e-17,39;UBERON:0006240,4.45e-17,39;UBERON:0003056,1.05e-16,49;UBERON:0002020,1.01e-14,34;UBERON:0003528,2.60e-13,29;UBERON:0002791,2.60e-13,29;UBERON:0001893,2.60e-13,29;UBERON:0010314,3.14e-13,92;UBERON:0000956,9.21e-10,21;UBERON:0001869,9.21e-10,21;UBERON:0000203,9.21e-10,21;UBERON:0002619,9.71e-09,17 | |||
|phase1_expression=22.7411362888807,25.4752047576734,28.6649520815408,18.1478526784098,19.0340377379612,7.89032577985882,10.2789561862031,0.645616617207881,0.140788722151667,0.234064526321993,0.171217968225505,0.398860794976682,0.684802919724823,1.48614684112296,4.99664642723494,4.85940641735582,2.09868563438444,15.1421839371954,10.6949258212476,9.76096199135469,38.3545238581325,7.24823943766463,6.52999472847338,14.7193028969934,15.3704218315004,31.5827580263261,23.26114779259,18.3150547783006,17.29213117053,13.1055667475164,26.8293917892919,1.90509202037889,3.07532393792285,0,8.66554859253824,8.81043620400009,8.16677425049476,1.25559489221072,3.906676722619,2.09409497589519,0.588231488031014,1.36609096991689,0,12.7155786155333,15.6120474078052,17.2533947031981,35.2076104956618,46.2213331526547,59.9743278865108,50.3573438602394,24.3576373628131,83.3764873316835,7.3824346665404,0.725362142011344,1.34437519656986,13.6347501099052,10.0286703978565,7.73508138416164,25.0872411465901,17.4567023159771,16.4796164911607,33.8844532069132,40.0182658250013,39.1456377017409,35.5991890524111,33.3925654024667,46.1384170198343,94.1334848037809,18.456750990909,17.2807601064564,14.9330722559481,27.1368435183613,28.0503047008549,16.1687854963739,16.8688028992096,22.9804696652505,37.4393995397922,35.369392649597,33.7934373163736,20.3104883104499,23.1463738314096,22.3992749339407,45.7860118362265,45.0210088025344,43.2419041208373,15.9099436155781,16.0879999302986,16.2167517868012,11.6618337733103,16.0967423027453,9.27566363845369,5.16254326188832,2.719885334831,2.69851595818909,5.84798775702902,4.48026887097336,11.6568868709354,15.8500199997594,20.5230943636266,23.3204119176825,18.4504879907451,26.9485602570067,2.54805239706646,14.2213340630666,21.6491041011214,16.2150313904063,20.2209778005913,9.47726201668198,9.32176381129818,14.6957717674177,12.3174582003956,6.69824052286711,8.99400439298628,10.399862198131,7.64326596382081,16.0853236901985,5.93267922562497,7.80836527367523,5.30766331169925,4.52947179852746,7.50861162765338,2.42437626567611,11.1835056730873,20.4946557908083,23.8769245767339,22.9911349687732,11.5022519525683,10.7982491578813,10.6738990741374,31.6058249144176,26.0775343606617,18.4711897605911,29.8977830730716,30.4301394223093,29.7136903720171,25.3096370385702,12.220723662038,9.45492976636707,16.9324248150562,6.10281382070775,7.28674480591141,15.1735388926092,16.7457780718975,11.3028613376786,13.4712268319629,13.3238269096244,16.3041000733928,12.4177617954728,10.1316956678436,8.69887968771969,8.44565395986955,6.35667624039967,8.06337022754234,6.96504333044333,6.37924622864625,10.3497818745616,8.42655824775882,7.72043721344146,9.94572247884574,7.04227626620706,5.15957331958412,8.28285482720668,6.8655973319711,4.52557733019029,6.47921874126989,8.37122201101468,5.90201483079162,6.889155199663,7.40519324610662,6.895033491322,7.21512404958116,6.43279944671462,5.48875288227627,6.57611451925822,31.1229123874908,15.7444056940305,52.2061677114401,9.78467096655114,10.4511242762265,11.3795969211615,7.60318021800351,7.46229041106367,7.56085349072559,8.56015317506516,12.3377556001573,9.88193728344065,6.28338022000674,9.94782360205754,5.8489226135736,17.0775687644302,11.2391785934841,11.5501938487533,16.311439481965,9.82537208443668,7.88954149711563,9.16430975303914,8.72786192254316,9.39819986530269,13.5326189445911,9.74226976665374,15.5428740562961,17.1522057851303,7.41131567717872,2.8363667971736,3.73462090715086,2.69834534861824,2.23146133527353,3.13530307678142,3.56476192493988,3.16465751195892,4.70192157647603,2.74561413188081,2.87536413054709,5.58211421502755,7.17686648163489,3.78868316920668,3.76734568396016,4.3419916922703,15.888774354328,9.66406200029472,9.4519686336375,8.14776411720903,8.68353918667458,11.0554129911598,9.99783291721258,8.97614780145875,6.46304090835383,7.75126413770712,8.13219320153184,9.66793556822854,13.296743603674,12.729117155173,34.6819953060326,56.0222854333271,6.39293554924747,8.00216564283724,25.2064426280833,27.0758996027989,13.2787305755107,6.31177318010932,12.6203287766503,14.4462335389756,8.83235930704476,10.0366895140072,8.91194696329577,9.34152551603147,12.9539424535966,9.35218745316198,13.0444966722353,23.4564560987919,12.9165477539524,18.3407571777273,10.9134262766896,17.8167732810338,7.96470830039777,8.98288353773431,10.883648050731,9.43025398779491,12.4026795009925,11.9899707698132,7.75284879504663,7.63420831902762,11.0514187299264,10.1131762539461,5.27093042874994,13.4076206222643,28.2564872775644,13.8647042404109,20.3093133538925,18.2186479776853,23.4089108407801,21.5826269298505,24.3532550491139,34.7090041990643,9.38686832254841,8.68511490541663,11.467476698858,8.07942639413252,5.9741837877485,5.72972786817481,5.13301079213487,4.76008609260678,10.7847909553045,33.3765543618917,4.95525554313773,8.87463532241857,4.8150577116125,3.01389531207506,3.69074414846768,5.49067615695654,8.32894306969891,6.9975726161829,7.32459861163446,9.54670618015114,9.64824780422463,8.13277868507395,8.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|phase1_expression=22.7411362888807,25.4752047576734,28.6649520815408,18.1478526784098,19.0340377379612,7.89032577985882,10.2789561862031,0.645616617207881,0.140788722151667,0.234064526321993,0.171217968225505,0.398860794976682,0.684802919724823,1.48614684112296,4.99664642723494,4.85940641735582,2.09868563438444,15.1421839371954,10.6949258212476,9.76096199135469,38.3545238581325,7.24823943766463,6.52999472847338,14.7193028969934,15.3704218315004,31.5827580263261,23.26114779259,18.3150547783006,17.29213117053,13.1055667475164,26.8293917892919,1.90509202037889,3.07532393792285,0,8.66554859253824,8.81043620400009,8.16677425049476,1.25559489221072,3.906676722619,2.09409497589519,0.588231488031014,1.36609096991689,0,12.7155786155333,15.6120474078052,17.2533947031981,35.2076104956618,46.2213331526547,59.9743278865108,50.3573438602394,24.3576373628131,83.3764873316835,7.3824346665404,0.725362142011344,1.34437519656986,13.6347501099052,10.0286703978565,7.73508138416164,25.0872411465901,17.4567023159771,16.4796164911607,33.8844532069132,40.0182658250013,39.1456377017409,35.5991890524111,33.3925654024667,46.1384170198343,94.1334848037809,18.456750990909,17.2807601064564,14.9330722559481,27.1368435183613,28.0503047008549,16.1687854963739,16.8688028992096,22.9804696652505,37.4393995397922,35.369392649597,33.7934373163736,20.3104883104499,23.1463738314096,22.3992749339407,45.7860118362265,45.0210088025344,43.2419041208373,15.9099436155781,16.0879999302986,16.2167517868012,11.6618337733103,16.0967423027453,9.27566363845369,5.16254326188832,2.719885334831,2.69851595818909,5.84798775702902,4.48026887097336,11.6568868709354,15.8500199997594,20.5230943636266,23.3204119176825,18.4504879907451,26.9485602570067,2.54805239706646,14.2213340630666,21.6491041011214,16.2150313904063,20.2209778005913,9.47726201668198,9.32176381129818,14.6957717674177,12.3174582003956,6.69824052286711,8.99400439298628,10.399862198131,7.64326596382081,16.0853236901985,5.93267922562497,7.80836527367523,5.30766331169925,4.52947179852746,7.50861162765338,2.42437626567611,11.1835056730873,20.4946557908083,23.8769245767339,22.9911349687732,11.5022519525683,10.7982491578813,10.6738990741374,31.6058249144176,26.0775343606617,18.4711897605911,29.8977830730716,30.4301394223093,29.7136903720171,25.3096370385702,12.220723662038,9.45492976636707,16.9324248150562,6.10281382070775,7.28674480591141,15.1735388926092,16.7457780718975,11.3028613376786,13.4712268319629,13.3238269096244,16.3041000733928,12.4177617954728,10.1316956678436,8.69887968771969,8.44565395986955,6.35667624039967,8.06337022754234,6.96504333044333,6.37924622864625,10.3497818745616,8.42655824775882,7.72043721344146,9.94572247884574,7.04227626620706,5.15957331958412,8.28285482720668,6.8655973319711,4.52557733019029,6.47921874126989,8.37122201101468,5.90201483079162,6.889155199663,7.40519324610662,6.895033491322,7.21512404958116,6.43279944671462,5.48875288227627,6.57611451925822,31.1229123874908,15.7444056940305,52.2061677114401,9.78467096655114,10.4511242762265,11.3795969211615,7.60318021800351,7.46229041106367,7.56085349072559,8.56015317506516,12.3377556001573,9.88193728344065,6.28338022000674,9.94782360205754,5.8489226135736,17.0775687644302,11.2391785934841,11.5501938487533,16.311439481965,9.82537208443668,7.88954149711563,9.16430975303914,8.72786192254316,9.39819986530269,13.5326189445911,9.74226976665374,15.5428740562961,17.1522057851303,7.41131567717872,2.8363667971736,3.73462090715086,2.69834534861824,2.23146133527353,3.13530307678142,3.56476192493988,3.16465751195892,4.70192157647603,2.74561413188081,2.87536413054709,5.58211421502755,7.17686648163489,3.78868316920668,3.76734568396016,4.3419916922703,15.888774354328,9.66406200029472,9.4519686336375,8.14776411720903,8.68353918667458,11.0554129911598,9.99783291721258,8.97614780145875,6.46304090835383,7.75126413770712,8.13219320153184,9.66793556822854,13.296743603674,12.729117155173,34.6819953060326,56.0222854333271,6.39293554924747,8.00216564283724,25.2064426280833,27.0758996027989,13.2787305755107,6.31177318010932,12.6203287766503,14.4462335389756,8.83235930704476,10.0366895140072,8.91194696329577,9.34152551603147,12.9539424535966,9.35218745316198,13.0444966722353,23.4564560987919,12.9165477539524,18.3407571777273,10.9134262766896,17.8167732810338,7.96470830039777,8.98288353773431,10.883648050731,9.43025398779491,12.4026795009925,11.9899707698132,7.75284879504663,7.63420831902762,11.0514187299264,10.1131762539461,5.27093042874994,13.4076206222643,28.2564872775644,13.8647042404109,20.3093133538925,18.2186479776853,23.4089108407801,21.5826269298505,24.3532550491139,34.7090041990643,9.38686832254841,8.68511490541663,11.467476698858,8.07942639413252,5.9741837877485,5.72972786817481,5.13301079213487,4.76008609260678,10.7847909553045,33.3765543618917,4.95525554313773,8.87463532241857,4.8150577116125,3.01389531207506,3.69074414846768,5.49067615695654,8.32894306969891,6.9975726161829,7.32459861163446,9.54670618015114,9.64824780422463,8.13277868507395,8.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| ||
|short_description=p1@Rabl5 | |short_description=p1@Rabl5 | ||
}} | }} |
Latest revision as of 14:13, 25 September 2015
Short description: | p1@Rabl5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rabl5_5end |
Coexpression cluster: | MCL_coexpression_mm9:346 |
Association with transcript: | 0bp_to_ENSMUST00000008131, NM_026073, uc009abc.1_5end |
EntrezGene: | Rabl5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.55e-13 | 44 |
neurectodermal cell | 1.55e-13 | 44 |
neural cell | 3.11e-13 | 43 |
embryonic cell | 2.12e-11 | 70 |
CNS neuron (sensu Vertebrata) | 3.81e-09 | 23 |
neuroblast (sensu Vertebrata) | 3.81e-09 | 23 |
electrically responsive cell | 1.22e-08 | 39 |
electrically active cell | 1.22e-08 | 39 |
neuron | 1.62e-08 | 33 |
neuronal stem cell | 1.62e-08 | 33 |
neuroblast | 1.62e-08 | 33 |
electrically signaling cell | 1.62e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.03e-28 | 75 |
central nervous system | 3.80e-28 | 73 |
regional part of nervous system | 4.05e-24 | 54 |
neural tube | 8.58e-23 | 52 |
neural rod | 8.58e-23 | 52 |
future spinal cord | 8.58e-23 | 52 |
neural keel | 8.58e-23 | 52 |
ectoderm-derived structure | 1.01e-22 | 95 |
ectoderm | 1.01e-22 | 95 |
presumptive ectoderm | 1.01e-22 | 95 |
neurectoderm | 8.63e-22 | 64 |
neural plate | 8.63e-22 | 64 |
presumptive neural plate | 8.63e-22 | 64 |
brain | 4.89e-21 | 47 |
future brain | 4.89e-21 | 47 |
regional part of brain | 1.28e-20 | 46 |
ecto-epithelium | 1.07e-17 | 73 |
anterior neural tube | 1.24e-17 | 40 |
regional part of forebrain | 4.45e-17 | 39 |
forebrain | 4.45e-17 | 39 |
future forebrain | 4.45e-17 | 39 |
pre-chordal neural plate | 1.05e-16 | 49 |
gray matter | 1.01e-14 | 34 |
brain grey matter | 2.60e-13 | 29 |
regional part of telencephalon | 2.60e-13 | 29 |
telencephalon | 2.60e-13 | 29 |
structure with developmental contribution from neural crest | 3.14e-13 | 92 |
cerebral cortex | 9.21e-10 | 21 |
cerebral hemisphere | 9.21e-10 | 21 |
pallium | 9.21e-10 | 21 |
regional part of cerebral cortex | 9.71e-09 | 17 |