FFCP PHASE1:Mm9::chr13:99696251..99696263,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr13:99696251..99696263,- to FFCP PHASE1:Mm9::chr13:99696251..99696263,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=238799 | |EntrezGene=238799 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8BFY9 | |UniProt=Q8BFY9 | ||
|association_with_transcript=75bp_to_ENSMUST00000109401,NM_178716,uc007rpf.1,uc007rph.1_5end | |||
|cluster_id=chr13:99696251..99696263,- | |||
|description=CAGE_peak_7_at_Tnpo1_5end | |||
|id=chr13:99696251..99696263,- | |||
|ontology_enrichment_celltype=CL:0000107!2.60e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,6.78e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!9.20e-13!71;UBERON:0003075!9.20e-13!71;UBERON:0007284!9.20e-13!71;UBERON:0000033!1.73e-12!63;UBERON:0004121!1.74e-12!102;UBERON:0000924!1.74e-12!102;UBERON:0006601!1.74e-12!102;UBERON:0001017!2.93e-12!73;UBERON:0005743!2.93e-12!73;UBERON:0000073!1.82e-11!75;UBERON:0001016!1.82e-11!75;UBERON:0003056!6.36e-10!49;UBERON:0000955!3.98e-09!50;UBERON:0006238!3.98e-09!50;UBERON:0002616!1.19e-08!49;UBERON:0001049!1.74e-08!52;UBERON:0005068!1.74e-08!52;UBERON:0006241!1.74e-08!52;UBERON:0007135!1.74e-08!52;UBERON:0002410!2.60e-07!9;UBERON:0003080!6.67e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.73e-14,64;UBERON:0003075,5.73e-14,64;UBERON:0007284,5.73e-14,64;UBERON:0004121,1.43e-13,95;UBERON:0000924,1.43e-13,95;UBERON:0006601,1.43e-13,95;UBERON:0001017,3.26e-13,73;UBERON:0001016,3.42e-12,75;UBERON:0010371,8.59e-12,73;UBERON:0010314,5.17e-11,92;UBERON:0003056,9.59e-11,49;UBERON:0000955,3.92e-09,47;UBERON:0006238,3.92e-09,47;UBERON:0000073,8.26e-09,54;UBERON:0001049,9.03e-09,52;UBERON:0005068,9.03e-09,52;UBERON:0006241,9.03e-09,52;UBERON:0007135,9.03e-09,52;UBERON:0002616,1.28e-08,46;UBERON:0002410,6.78e-08,9;UBERON:0003080,2.00e-07,40;UBERON:0002780,6.57e-07,39;UBERON:0001890,6.57e-07,39;UBERON:0006240,6.57e-07,39 | |||
|phase1_expression=1.60148847104794,1.39590163055744,1.36499771816861,1.81478526784098,0.500895729946347,0.839396359559449,0.467225281191051,0.774739940649458,2.39340827657833,4.21316147379588,0.171217968225505,0.0797721589953364,1.02720437958723,0.874204024189974,0.666219523631325,0.809901069559304,0,0.473193248037357,0.548457734422955,0,1.61582251287033,0.496454756004426,0,1.11994695955385,0.91763712426868,0.57423196411502,0.86152399231815,1.07735616342945,0.570070258369122,0,0,0,0,0,1.1554064790051,0.166234645358492,0,0.837063261473815,2.3440060335714,1.0470474879476,0.588231488031014,2.73218193983378,1.45653105909346,0.503587271902309,0.709638518536602,1.46837401729345,0.782391344348039,1.96222640742402,0.659058548203415,1.55543919259427,0.839918529752175,0,1.8456086666351,0,2.35265659399725,2.05807548828758,0.85960031981627,0.515672092277442,1.61853168687678,1.05798195854407,1.26766280701236,0.338844532069132,0,0,0.988866362566974,0,0.599200221036809,0,1.45165457231869,0.270011876663381,1.89292465216244,0.856952953211411,0.662605622854841,1.34739879136449,1.15014565221884,2.75765635983006,1.10115880999389,2.17068474744819,2.15049146558741,1.71452174049252,1.00636407962651,1.04182674111352,1.11673199600552,1.68828783009504,1.37518422999129,1.47314292736834,3.13217697758026,1.3047961207771,0.530083353332288,0.831287161174641,2.89864488701678,0.860423876981386,0,1.07940638327563,1.29955283489534,1.79210754838934,1.26399978118577,0.170430322578058,0,0,3.52108549441701,0,0,0,0.649473123033642,1.26679932737549,1.01104889002957,1.1418387971906,3.10725460376606,0.742210695324124,1.38788261412909,0.913396434936424,1.38369298353635,1.95939432718409,1.76383060703557,0.628332956648377,1.23597483867187,0.289198713839823,0,1.45590164952668,1.32504911076236,0,0,2.63502717310392,1.8850203613211,0.510914110417183,0.359445373517761,0,0.762421362438388,4.79330046095433,4.57500602818627,2.1361239859187,2.08589184230732,2.04572365864264,4.1557608911912,2.43361894601636,1.01839363850316,0.497627882440372,3.79084137650512,3.78795340595653,3.12289063110489,1.14951052216736,1.44049703844279,1.80845781402858,2.78949646520444,4.99643509110914,3.46696380870997,7.76110112217047,2.15567992932842,2.26927296201383,0.879755620819744,0.876782929710299,1.11218899690239,1.74126083261083,0.61734640922383,2.38841120182192,0,0.257347907114715,0.852490498186778,1.03562886267751,1.40715635988658,0.540186184383045,1.18372367792605,1.37734962223183,0.771335564436891,0.697601834251224,0.536546802799238,1.16765342367169,0.822799249567402,1.47750717671186,1.13496333364198,0.730999937126662,1.53685080703735,1.34206418760372,1.68231958851302,1.85228302282712,0.991256348951394,0.793351699990633,1.91959425481711,1.85789337488351,1.15980715189884,0.605050573870028,0.667134131534611,1.33157938278791,0.474529061544512,0.823494773620054,1.00534083520108,1.98956472041151,0.974820435595601,1.79763881730844,2.37751854862164,0.796565093017469,1.13800740571849,1.48523066392647,1.1270773567308,2.03651327845314,1.35766741017338,0.911765658574141,1.39120381673366,2.80459281161244,2.19798218977925,2.46794327843601,0.889357881261447,0.166845105716094,0.393117990226406,0.224862112384854,0.202860121388503,0.964708639009667,1.01850340712568,0.863088412352432,0.486405680325106,0.549122826376163,2.87536413054709,0.744281895337007,1.87222603868736,1.01031551178845,0.358794827043824,0.482443521363367,0.923765950833023,1.51593129416388,1.62964976442026,0.678980343100753,0.704070744865506,0,0.476087281772027,0.975668239288994,0.945810864637146,0.8858587585951,0.159454768657487,0.81931657357869,2.41758974612254,0.578596234326046,1.50791283939272,0,0.983528546038072,0.275936746304732,3.05046120976805,2.10981035865966,1.3114795630134,2.01976741763498,5.04813151066011,3.90438744296638,8.61693590931196,4.54040716109849,6.46116154838943,6.79383673893198,7.69140333182299,5.26060544240361,3.95287777946523,3.85585579706168,2.55492153374884,0.712262414669021,1.62886959353576,4.12425307431339,1.32745138339963,1.21390318077491,0,1.32023555829129,0.295301892880773,0.307435147943927,1.80899805217755,1.09060118843252,1.42598951353889,0.948110273807448,0,0,3.06395645178409,2.70091641046965,1.29358683782755,1.71469628025274,2.12808280370728,0.891844088010353,2.13913726782757,0,1.17335854031855,2.75381692122966,1.10264199027481,0.65954501176592,2.09903754704677,0.844380948994182,0.477489376012546,0.164140899745061,1.1659233465194,5.56275906031529,0.512612642393558,0.619160603889667,0.925972636848558,0,0.27338845544205,0.457556346413045,0.509935289981566,0.979660166265606,0.829199842826543,3.81868247206045,2.37251995185852,2.03319467126849,1.51207477150522,1.25452977608681,1.31017538247707,0.809186078308924,0.826534557253359,1.04702376793612,1.16653475962614,0,5.07323644815771,1.94371509857172,1.32366792365678,0.777804753376191,0.645799117388655,0.337912250981556,1.29092962510329,0.781226309063701,1.25831213310853,1.69108884578204,3.45636007509439,1.58005560314089,0,0.924398614483445,0.909445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| |phase1_expression=1.60148847104794,1.39590163055744,1.36499771816861,1.81478526784098,0.500895729946347,0.839396359559449,0.467225281191051,0.774739940649458,2.39340827657833,4.21316147379588,0.171217968225505,0.0797721589953364,1.02720437958723,0.874204024189974,0.666219523631325,0.809901069559304,0,0.473193248037357,0.548457734422955,0,1.61582251287033,0.496454756004426,0,1.11994695955385,0.91763712426868,0.57423196411502,0.86152399231815,1.07735616342945,0.570070258369122,0,0,0,0,0,1.1554064790051,0.166234645358492,0,0.837063261473815,2.3440060335714,1.0470474879476,0.588231488031014,2.73218193983378,1.45653105909346,0.503587271902309,0.709638518536602,1.46837401729345,0.782391344348039,1.96222640742402,0.659058548203415,1.55543919259427,0.839918529752175,0,1.8456086666351,0,2.35265659399725,2.05807548828758,0.85960031981627,0.515672092277442,1.61853168687678,1.05798195854407,1.26766280701236,0.338844532069132,0,0,0.988866362566974,0,0.599200221036809,0,1.45165457231869,0.270011876663381,1.89292465216244,0.856952953211411,0.662605622854841,1.34739879136449,1.15014565221884,2.75765635983006,1.10115880999389,2.17068474744819,2.15049146558741,1.71452174049252,1.00636407962651,1.04182674111352,1.11673199600552,1.68828783009504,1.37518422999129,1.47314292736834,3.13217697758026,1.3047961207771,0.530083353332288,0.831287161174641,2.89864488701678,0.860423876981386,0,1.07940638327563,1.29955283489534,1.79210754838934,1.26399978118577,0.170430322578058,0,0,3.52108549441701,0,0,0,0.649473123033642,1.26679932737549,1.01104889002957,1.1418387971906,3.10725460376606,0.742210695324124,1.38788261412909,0.913396434936424,1.38369298353635,1.95939432718409,1.76383060703557,0.628332956648377,1.23597483867187,0.289198713839823,0,1.45590164952668,1.32504911076236,0,0,2.63502717310392,1.8850203613211,0.510914110417183,0.359445373517761,0,0.762421362438388,4.79330046095433,4.57500602818627,2.1361239859187,2.08589184230732,2.04572365864264,4.1557608911912,2.43361894601636,1.01839363850316,0.497627882440372,3.79084137650512,3.78795340595653,3.12289063110489,1.14951052216736,1.44049703844279,1.80845781402858,2.78949646520444,4.99643509110914,3.46696380870997,7.76110112217047,2.15567992932842,2.26927296201383,0.879755620819744,0.876782929710299,1.11218899690239,1.74126083261083,0.61734640922383,2.38841120182192,0,0.257347907114715,0.852490498186778,1.03562886267751,1.40715635988658,0.540186184383045,1.18372367792605,1.37734962223183,0.771335564436891,0.697601834251224,0.536546802799238,1.16765342367169,0.822799249567402,1.47750717671186,1.13496333364198,0.730999937126662,1.53685080703735,1.34206418760372,1.68231958851302,1.85228302282712,0.991256348951394,0.793351699990633,1.91959425481711,1.85789337488351,1.15980715189884,0.605050573870028,0.667134131534611,1.33157938278791,0.474529061544512,0.823494773620054,1.00534083520108,1.98956472041151,0.974820435595601,1.79763881730844,2.37751854862164,0.796565093017469,1.13800740571849,1.48523066392647,1.1270773567308,2.03651327845314,1.35766741017338,0.911765658574141,1.39120381673366,2.80459281161244,2.19798218977925,2.46794327843601,0.889357881261447,0.166845105716094,0.393117990226406,0.224862112384854,0.202860121388503,0.964708639009667,1.01850340712568,0.863088412352432,0.486405680325106,0.549122826376163,2.87536413054709,0.744281895337007,1.87222603868736,1.01031551178845,0.358794827043824,0.482443521363367,0.923765950833023,1.51593129416388,1.62964976442026,0.678980343100753,0.704070744865506,0,0.476087281772027,0.975668239288994,0.945810864637146,0.8858587585951,0.159454768657487,0.81931657357869,2.41758974612254,0.578596234326046,1.50791283939272,0,0.983528546038072,0.275936746304732,3.05046120976805,2.10981035865966,1.3114795630134,2.01976741763498,5.04813151066011,3.90438744296638,8.61693590931196,4.54040716109849,6.46116154838943,6.79383673893198,7.69140333182299,5.26060544240361,3.95287777946523,3.85585579706168,2.55492153374884,0.712262414669021,1.62886959353576,4.12425307431339,1.32745138339963,1.21390318077491,0,1.32023555829129,0.295301892880773,0.307435147943927,1.80899805217755,1.09060118843252,1.42598951353889,0.948110273807448,0,0,3.06395645178409,2.70091641046965,1.29358683782755,1.71469628025274,2.12808280370728,0.891844088010353,2.13913726782757,0,1.17335854031855,2.75381692122966,1.10264199027481,0.65954501176592,2.09903754704677,0.844380948994182,0.477489376012546,0.164140899745061,1.1659233465194,5.56275906031529,0.512612642393558,0.619160603889667,0.925972636848558,0,0.27338845544205,0.457556346413045,0.509935289981566,0.979660166265606,0.829199842826543,3.81868247206045,2.37251995185852,2.03319467126849,1.51207477150522,1.25452977608681,1.31017538247707,0.809186078308924,0.826534557253359,1.04702376793612,1.16653475962614,0,5.07323644815771,1.94371509857172,1.32366792365678,0.777804753376191,0.645799117388655,0.337912250981556,1.29092962510329,0.781226309063701,1.25831213310853,1.69108884578204,3.45636007509439,1.58005560314089,0,0.924398614483445,0.909445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| ||
|short_description=p7@Tnpo1 | |||
}} | }} |
Latest revision as of 14:40, 25 September 2015
Short description: | p7@Tnpo1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Tnpo1_5end |
Coexpression cluster: | NA |
Association with transcript: | 75bp_to_ENSMUST00000109401, NM_178716, uc007rpf.1, uc007rph.1_5end |
EntrezGene: | Tnpo1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 6.78e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 5.73e-14 | 64 |
neural plate | 5.73e-14 | 64 |
presumptive neural plate | 5.73e-14 | 64 |
ectoderm-derived structure | 1.43e-13 | 95 |
ectoderm | 1.43e-13 | 95 |
presumptive ectoderm | 1.43e-13 | 95 |
central nervous system | 3.26e-13 | 73 |
nervous system | 3.42e-12 | 75 |
ecto-epithelium | 8.59e-12 | 73 |
structure with developmental contribution from neural crest | 5.17e-11 | 92 |
pre-chordal neural plate | 9.59e-11 | 49 |
brain | 3.92e-09 | 47 |
future brain | 3.92e-09 | 47 |
regional part of nervous system | 8.26e-09 | 54 |
neural tube | 9.03e-09 | 52 |
neural rod | 9.03e-09 | 52 |
future spinal cord | 9.03e-09 | 52 |
neural keel | 9.03e-09 | 52 |
regional part of brain | 1.28e-08 | 46 |
autonomic nervous system | 6.78e-08 | 9 |
anterior neural tube | 2.00e-07 | 40 |
regional part of forebrain | 6.57e-07 | 39 |
forebrain | 6.57e-07 | 39 |
future forebrain | 6.57e-07 | 39 |