FFCP PHASE1:Mm9::chr5:138526311..138526375,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74570 | |EntrezGene=74570 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8BGS3 | |UniProt=Q8BGS3 | ||
|association_with_transcript=0bp_to_ENSMUST00000019660,ENSMUST00000066617,ENSMUST00000110963,NM_029869,NM_133906,uc009aej.1,uc009aek.1_5end | |association_with_transcript=0bp_to_ENSMUST00000019660,ENSMUST00000066617,ENSMUST00000110963,NM_029869,NM_133906,uc009aej.1,uc009aek.1_5end | ||
|cluster_id=chr5:138526311..138526375,+ | |||
|description=CAGE_peak_1_at_Zkscan1_5end | |description=CAGE_peak_1_at_Zkscan1_5end | ||
|id=chr5:138526311..138526375,+ | |id=chr5:138526311..138526375,+ | ||
|ontology_enrichment_celltype=CL:0000540!3.96e-12!33;CL:0000047!3.96e-12!33;CL:0000031!3.96e-12!33;CL:0000404!3.96e-12!33;CL:0000393!2.19e-08!39;CL:0000211!2.19e-08!39;CL:0000117!1.01e-07!23;CL:0000337!1.01e-07!23 | |ontology_enrichment_celltype=CL:0000540!3.96e-12!33;CL:0000047!3.96e-12!33;CL:0000031!3.96e-12!33;CL:0000404!3.96e-12!33;CL:0000393!2.19e-08!39;CL:0000211!2.19e-08!39;CL:0000117!1.01e-07!23;CL:0000337!1.01e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.96e-12,33;CL:0000047,3.96e-12,33;CL:0000031,3.96e-12,33;CL:0000404,3.96e-12,33;CL:0000393,2.19e-08,39;CL:0000211,2.19e-08,39;CL:0000117,1.01e-07,23;CL:0000337,1.01e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.34e-15!63;UBERON:0004121!7.80e-15!102;UBERON:0000924!7.80e-15!102;UBERON:0006601!7.80e-15!102;UBERON:0001017!2.71e-14!73;UBERON:0005743!2.71e-14!73;UBERON:0003056!1.85e-13!49;UBERON:0002346!2.39e-13!71;UBERON:0003075!2.39e-13!71;UBERON:0007284!2.39e-13!71;UBERON:0000073!2.43e-13!75;UBERON:0001016!2.43e-13!75;UBERON:0000153!1.50e-12!94;UBERON:0000955!4.65e-12!50;UBERON:0006238!4.65e-12!50;UBERON:0002616!1.19e-11!49;UBERON:0001049!4.30e-11!52;UBERON:0005068!4.30e-11!52;UBERON:0006241!4.30e-11!52;UBERON:0007135!4.30e-11!52;UBERON:0007811!4.39e-11!86;UBERON:0002780!7.86e-11!39;UBERON:0001890!7.86e-11!39;UBERON:0006240!7.86e-11!39;UBERON:0003080!9.37e-11!40;UBERON:0002020!1.05e-09!34;UBERON:0000475!4.60e-09!200;UBERON:0002791!4.83e-09!29;UBERON:0003528!4.83e-09!29;UBERON:0001893!4.83e-09!29;UBERON:0000468!8.63e-08!333;UBERON:0000922!9.57e-08!328;UBERON:0000956!5.82e-07!21;UBERON:0001869!5.82e-07!21;UBERON:0000203!5.82e-07!21 | |ontology_enrichment_uberon=UBERON:0000033!2.34e-15!63;UBERON:0004121!7.80e-15!102;UBERON:0000924!7.80e-15!102;UBERON:0006601!7.80e-15!102;UBERON:0001017!2.71e-14!73;UBERON:0005743!2.71e-14!73;UBERON:0003056!1.85e-13!49;UBERON:0002346!2.39e-13!71;UBERON:0003075!2.39e-13!71;UBERON:0007284!2.39e-13!71;UBERON:0000073!2.43e-13!75;UBERON:0001016!2.43e-13!75;UBERON:0000153!1.50e-12!94;UBERON:0000955!4.65e-12!50;UBERON:0006238!4.65e-12!50;UBERON:0002616!1.19e-11!49;UBERON:0001049!4.30e-11!52;UBERON:0005068!4.30e-11!52;UBERON:0006241!4.30e-11!52;UBERON:0007135!4.30e-11!52;UBERON:0007811!4.39e-11!86;UBERON:0002780!7.86e-11!39;UBERON:0001890!7.86e-11!39;UBERON:0006240!7.86e-11!39;UBERON:0003080!9.37e-11!40;UBERON:0002020!1.05e-09!34;UBERON:0000475!4.60e-09!200;UBERON:0002791!4.83e-09!29;UBERON:0003528!4.83e-09!29;UBERON:0001893!4.83e-09!29;UBERON:0000468!8.63e-08!333;UBERON:0000922!9.57e-08!328;UBERON:0000956!5.82e-07!21;UBERON:0001869!5.82e-07!21;UBERON:0000203!5.82e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,9.72e-16,95;UBERON:0000924,9.72e-16,95;UBERON:0006601,9.72e-16,95;UBERON:0010371,5.66e-15,73;UBERON:0002346,1.21e-14,64;UBERON:0003075,1.21e-14,64;UBERON:0007284,1.21e-14,64;UBERON:0001017,2.71e-14,73;UBERON:0003056,1.85e-13,49;UBERON:0001016,2.43e-13,75;UBERON:0000073,1.89e-12,54;UBERON:0001049,4.30e-11,52;UBERON:0005068,4.30e-11,52;UBERON:0006241,4.30e-11,52;UBERON:0007135,4.30e-11,52;UBERON:0002780,7.86e-11,39;UBERON:0001890,7.86e-11,39;UBERON:0006240,7.86e-11,39;UBERON:0003080,9.37e-11,40;UBERON:0000955,1.24e-10,47;UBERON:0006238,1.24e-10,47;UBERON:0002616,3.09e-10,46;UBERON:0002020,1.05e-09,34;UBERON:0003528,4.83e-09,29;UBERON:0002791,4.83e-09,29;UBERON:0001893,4.83e-09,29;UBERON:0010314,1.60e-07,92;UBERON:0000922,4.93e-07,320;UBERON:0000956,5.82e-07,21;UBERON:0001869,5.82e-07,21;UBERON:0000203,5.82e-07,21 | |||
|phase1_expression=44.2010818009231,18.8446720125255,17.7449703361919,29.3390284967625,25.5456822272637,23.8388566114883,28.7343547932497,24.5334314538995,22.9485617107217,21.5339364216234,27.0524389796298,24.4102806525729,33.8977445263787,29.8103572248781,16.3223783289675,24.0945568193893,25.8837894907414,26.498821890092,25.7775135178789,19.5219239827094,29.0848052316659,33.9575053107028,37.6127696360067,27.0387194520857,23.3997466688513,15.5042630311055,18.9535278309993,19.39241094173,28.1234660795433,20.9185007700743,16.8515188098032,34.9266870402797,12.3012957516914,15.8481681015439,41.8834848639348,30.4209401006041,31.6462502206672,10.0447591376858,10.9386948233332,13.6116173433188,9.41170380849623,12.294818729252,15.5363312969969,27.0678158647491,30.3117024346349,29.5510270980307,10.9534788208725,8.06693078607652,6.15121311656521,11.0825042472342,12.3188051030319,10.062679505548,24.831825696545,23.9369506863744,19.8295341494054,12.8629718017974,17.7650732762029,18.5641953219879,42.2841403196559,34.9134046319542,33.5930643858275,9.4876468979357,4.4464739805557,6.29929802096979,8.89979726310277,3.5524005747305,3.89480143673926,13.4476406862544,61.2805608743103,45.4970012177798,57.4187144489273,29.136400409188,28.4920417827581,59.8980008161125,49.9354904005011,54.2339084099912,59.4625757396699,46.222816386838,49.0004841087417,49.5892441865529,45.2863835831928,52.6122504262328,34.6186918761712,29.2636557216474,42.7835093775068,50.6761167014708,49.5453449180878,50.3278503728312,24.5352866399516,25.8454735565206,47.5377761470752,28.3939879403858,7.47968467078526,39.9380361811985,43.5350199689938,36.7382047419815,23.7351070022661,16.5317412900716,11.4305842025262,9.89350808628953,51.6895350580417,47.4807966432976,99.3740434855918,21.3320010945999,16.2368280758411,19.5087096415826,16.6823066854878,34.1409800359989,42.7247508017833,35.4776712364931,30.0129615305415,20.7036525252256,27.673859670727,26.6779073778142,39.2746281833254,36.0663117116169,26.9442514830468,28.0522752424629,15.0383793831479,25.5591622916907,26.2801406967868,23.2740121504907,20.5030937339934,43.6243387547205,49.8483162216023,28.6111901833622,20.6082014150183,21.5964983157627,18.5522531526674,34.0024751448948,42.0900554593136,69.2355480141883,42.0654854865309,38.8687495142102,38.6485762880782,49.4835852356661,41.1431029955278,27.2451265636104,36.6447999728828,30.0931853917658,43.9807097213939,37.4740430226561,51.8578933839406,42.0466441761645,50.0748633753773,53.9358762399218,46.663458830745,38.8055056108524,44.6225745370983,43.8726105989341,50.3220215108894,35.7289043856947,43.0973236299677,28.9049298213398,29.01528123352,39.2097505632432,11.2354109970118,16.2129181482271,12.7873574728017,22.5767092063697,22.5145017581852,23.768192112854,35.985199808952,26.1696428224047,28.0766145455028,27.4390054805481,20.3887785063711,27.9069168257535,25.342216886676,29.5501435342371,28.4551521505954,22.8071980383518,26.126463719635,28.3175543584384,46.4740786326721,62.6689089389842,23.1293148088659,26.709507233018,40.3114793511592,37.622340841391,34.9230820182873,32.0676804151115,31.3553041821267,27.3924901602085,23.7264530772256,29.810510805046,34.4329236056369,36.2100779114894,30.4143975905827,29.6610404855893,40.8500914263172,42.6162324764346,33.0022147658362,43.3001862790872,48.4643263394246,47.2471080601129,45.7727869715597,51.9706425387261,60.3276564165415,67.0150071827394,55.4205509280053,46.0271421428316,31.4239784712378,24.1925403288336,20.4421354917731,20.6873143394065,20.2860121388503,19.0529956204409,18.3330613282622,23.3033871335157,37.6153726118082,26.6324570792439,33.0666875012915,37.5862357145188,35.2602570619453,29.299149841865,32.4709318474661,52.1039003072437,38.2439103644872,35.8138768246216,40.7412441105065,35.6464680127895,30.7444225257938,34.506289033014,32.1358915196119,37.855927684413,43.0343943409901,50.7154139295695,42.5744232315491,34.5751594050207,36.6092161555699,37.31945711403,13.5712155545345,11.9659250440116,25.0799779239708,33.1124095565679,40.9404004468869,40.4380318743101,25.4099165333847,20.955086957963,40.0695438658646,34.3586094981042,60.3185513651837,56.3966363168023,57.2592592391753,63.9752959582761,51.8157698143865,47.0531931237212,53.3638500227807,45.9489482483184,35.910841557692,35.2569895261165,40.2330789603333,41.0775606201613,18.5843193675948,42.9721725994317,32.0462970382636,25.838895926558,27.4630760379119,26.4394227231778,31.528251766523,42.8969800783456,40.6407011358582,29.3914184880309,18.9753495434998,20.6271086496374,43.9167091422387,50.2370452347355,25.2249433376371,37.5089811305287,49.1232447189098,43.3436226773031,44.2636865419705,29.5331000641161,13.3762873596315,18.6412222360162,34.843486892684,36.7696344059501,40.6890355273682,34.7402447586178,30.3205753767967,31.1867709515616,31.4799303560239,35.9725085900389,20.1627639341466,31.577190798373,23.5197049759534,28.632005464713,27.8856224550891,18.5310320297283,30.0861821089124,27.9902904647316,32.615193817844,11.4560474161814,43.179863123825,42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|phase1_expression=44.2010818009231,18.8446720125255,17.7449703361919,29.3390284967625,25.5456822272637,23.8388566114883,28.7343547932497,24.5334314538995,22.9485617107217,21.5339364216234,27.0524389796298,24.4102806525729,33.8977445263787,29.8103572248781,16.3223783289675,24.0945568193893,25.8837894907414,26.498821890092,25.7775135178789,19.5219239827094,29.0848052316659,33.9575053107028,37.6127696360067,27.0387194520857,23.3997466688513,15.5042630311055,18.9535278309993,19.39241094173,28.1234660795433,20.9185007700743,16.8515188098032,34.9266870402797,12.3012957516914,15.8481681015439,41.8834848639348,30.4209401006041,31.6462502206672,10.0447591376858,10.9386948233332,13.6116173433188,9.41170380849623,12.294818729252,15.5363312969969,27.0678158647491,30.3117024346349,29.5510270980307,10.9534788208725,8.06693078607652,6.15121311656521,11.0825042472342,12.3188051030319,10.062679505548,24.831825696545,23.9369506863744,19.8295341494054,12.8629718017974,17.7650732762029,18.5641953219879,42.2841403196559,34.9134046319542,33.5930643858275,9.4876468979357,4.4464739805557,6.29929802096979,8.89979726310277,3.5524005747305,3.89480143673926,13.4476406862544,61.2805608743103,45.4970012177798,57.4187144489273,29.136400409188,28.4920417827581,59.8980008161125,49.9354904005011,54.2339084099912,59.4625757396699,46.222816386838,49.0004841087417,49.5892441865529,45.2863835831928,52.6122504262328,34.6186918761712,29.2636557216474,42.7835093775068,50.6761167014708,49.5453449180878,50.3278503728312,24.5352866399516,25.8454735565206,47.5377761470752,28.3939879403858,7.47968467078526,39.9380361811985,43.5350199689938,36.7382047419815,23.7351070022661,16.5317412900716,11.4305842025262,9.89350808628953,51.6895350580417,47.4807966432976,99.3740434855918,21.3320010945999,16.2368280758411,19.5087096415826,16.6823066854878,34.1409800359989,42.7247508017833,35.4776712364931,30.0129615305415,20.7036525252256,27.673859670727,26.6779073778142,39.2746281833254,36.0663117116169,26.9442514830468,28.0522752424629,15.0383793831479,25.5591622916907,26.2801406967868,23.2740121504907,20.5030937339934,43.6243387547205,49.8483162216023,28.6111901833622,20.6082014150183,21.5964983157627,18.5522531526674,34.0024751448948,42.0900554593136,69.2355480141883,42.0654854865309,38.8687495142102,38.6485762880782,49.4835852356661,41.1431029955278,27.2451265636104,36.6447999728828,30.0931853917658,43.9807097213939,37.4740430226561,51.8578933839406,42.0466441761645,50.0748633753773,53.9358762399218,46.663458830745,38.8055056108524,44.6225745370983,43.8726105989341,50.3220215108894,35.7289043856947,43.0973236299677,28.9049298213398,29.01528123352,39.2097505632432,11.2354109970118,16.2129181482271,12.7873574728017,22.5767092063697,22.5145017581852,23.768192112854,35.985199808952,26.1696428224047,28.0766145455028,27.4390054805481,20.3887785063711,27.9069168257535,25.342216886676,29.5501435342371,28.4551521505954,22.8071980383518,26.126463719635,28.3175543584384,46.4740786326721,62.6689089389842,23.1293148088659,26.709507233018,40.3114793511592,37.622340841391,34.9230820182873,32.0676804151115,31.3553041821267,27.3924901602085,23.7264530772256,29.810510805046,34.4329236056369,36.2100779114894,30.4143975905827,29.6610404855893,40.8500914263172,42.6162324764346,33.0022147658362,43.3001862790872,48.4643263394246,47.2471080601129,45.7727869715597,51.9706425387261,60.3276564165415,67.0150071827394,55.4205509280053,46.0271421428316,31.4239784712378,24.1925403288336,20.4421354917731,20.6873143394065,20.2860121388503,19.0529956204409,18.3330613282622,23.3033871335157,37.6153726118082,26.6324570792439,33.0666875012915,37.5862357145188,35.2602570619453,29.299149841865,32.4709318474661,52.1039003072437,38.2439103644872,35.8138768246216,40.7412441105065,35.6464680127895,30.7444225257938,34.506289033014,32.1358915196119,37.855927684413,43.0343943409901,50.7154139295695,42.5744232315491,34.5751594050207,36.6092161555699,37.31945711403,13.5712155545345,11.9659250440116,25.0799779239708,33.1124095565679,40.9404004468869,40.4380318743101,25.4099165333847,20.955086957963,40.0695438658646,34.3586094981042,60.3185513651837,56.3966363168023,57.2592592391753,63.9752959582761,51.8157698143865,47.0531931237212,53.3638500227807,45.9489482483184,35.910841557692,35.2569895261165,40.2330789603333,41.0775606201613,18.5843193675948,42.9721725994317,32.0462970382636,25.838895926558,27.4630760379119,26.4394227231778,31.528251766523,42.8969800783456,40.6407011358582,29.3914184880309,18.9753495434998,20.6271086496374,43.9167091422387,50.2370452347355,25.2249433376371,37.5089811305287,49.1232447189098,43.3436226773031,44.2636865419705,29.5331000641161,13.3762873596315,18.6412222360162,34.843486892684,36.7696344059501,40.6890355273682,34.7402447586178,30.3205753767967,31.1867709515616,31.4799303560239,35.9725085900389,20.1627639341466,31.577190798373,23.5197049759534,28.632005464713,27.8856224550891,18.5310320297283,30.0861821089124,27.9902904647316,32.615193817844,11.4560474161814,43.179863123825,42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| ||
|short_description=p1@Zkscan1 | |short_description=p1@Zkscan1 | ||
}} | }} |
Latest revision as of 15:14, 25 September 2015
Short description: | p1@Zkscan1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zkscan1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000019660, ENSMUST00000066617, ENSMUST00000110963, NM_029869, NM_133906, uc009aej.1, uc009aek.1_5end |
EntrezGene: | Zkscan1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.96e-12 | 33 |
neuronal stem cell | 3.96e-12 | 33 |
neuroblast | 3.96e-12 | 33 |
electrically signaling cell | 3.96e-12 | 33 |
electrically responsive cell | 2.19e-08 | 39 |
electrically active cell | 2.19e-08 | 39 |
CNS neuron (sensu Vertebrata) | 1.01e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.01e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 9.72e-16 | 95 |
ectoderm | 9.72e-16 | 95 |
presumptive ectoderm | 9.72e-16 | 95 |
ecto-epithelium | 5.66e-15 | 73 |
neurectoderm | 1.21e-14 | 64 |
neural plate | 1.21e-14 | 64 |
presumptive neural plate | 1.21e-14 | 64 |
central nervous system | 2.71e-14 | 73 |
pre-chordal neural plate | 1.85e-13 | 49 |
nervous system | 2.43e-13 | 75 |
regional part of nervous system | 1.89e-12 | 54 |
neural tube | 4.30e-11 | 52 |
neural rod | 4.30e-11 | 52 |
future spinal cord | 4.30e-11 | 52 |
neural keel | 4.30e-11 | 52 |
regional part of forebrain | 7.86e-11 | 39 |
forebrain | 7.86e-11 | 39 |
future forebrain | 7.86e-11 | 39 |
anterior neural tube | 9.37e-11 | 40 |
brain | 1.24e-10 | 47 |
future brain | 1.24e-10 | 47 |
regional part of brain | 3.09e-10 | 46 |
gray matter | 1.05e-09 | 34 |
brain grey matter | 4.83e-09 | 29 |
regional part of telencephalon | 4.83e-09 | 29 |
telencephalon | 4.83e-09 | 29 |
structure with developmental contribution from neural crest | 1.60e-07 | 92 |
embryo | 4.93e-07 | 320 |
cerebral cortex | 5.82e-07 | 21 |
cerebral hemisphere | 5.82e-07 | 21 |
pallium | 5.82e-07 | 21 |