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FFCP PHASE1:Mm9::chr3:63780031..63780057,+: Difference between revisions

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{{FFCP|EntrezGene=229363|HGNC=|MCL_coexpression_id=361|UniProt=Q3THK7|association_with_transcript=3bp_to_ENSMUST00000029405_5end|description=CAGE_peak_2_at_Gmps_5end|id=chr3:63780031..63780057,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!4.25e-10!63;UBERON:0002346!6.78e-10!71;UBERON:0003075!6.78e-10!71;UBERON:0007284!6.78e-10!71;UBERON:0000955!4.26e-09!50;UBERON:0006238!4.26e-09!50;UBERON:0001049!9.98e-09!52;UBERON:0005068!9.98e-09!52;UBERON:0006241!9.98e-09!52;UBERON:0007135!9.98e-09!52;UBERON:0002616!1.23e-08!49;UBERON:0000468!1.48e-08!333;UBERON:0000025!2.27e-08!114;UBERON:0003056!5.08e-08!49;UBERON:0004111!1.10e-07!122;UBERON:0007100!5.13e-07!18;UBERON:0000948!5.13e-07!18;UBERON:0005498!5.13e-07!18;UBERON:0004140!5.13e-07!18;UBERON:0009881!5.13e-07!18;UBERON:0004141!5.13e-07!18;UBERON:0003084!5.13e-07!18;UBERON:0007005!5.13e-07!18;UBERON:0004139!5.13e-07!18;UBERON:0004291!5.13e-07!18;UBERON:0003080!7.13e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.75e-16,92;UBERON:0000073,1.64e-09,54;UBERON:0002346,1.79e-09,64;UBERON:0003075,1.79e-09,64;UBERON:0007284,1.79e-09,64;UBERON:0001049,1.07e-08,52;UBERON:0005068,1.07e-08,52;UBERON:0006241,1.07e-08,52;UBERON:0007135,1.07e-08,52;UBERON:0000025,2.36e-08,114;UBERON:0003056,5.28e-08,49;UBERON:0000922,5.69e-08,320;UBERON:0010371,8.46e-08,73;UBERON:0000955,9.51e-08,47;UBERON:0006238,9.51e-08,47;UBERON:0004111,1.14e-07,122;UBERON:0002616,2.60e-07,46;UBERON:0007100,5.12e-07,18;UBERON:0000948,5.12e-07,18;UBERON:0005498,5.12e-07,18;UBERON:0004140,5.12e-07,18;UBERON:0009881,5.12e-07,18;UBERON:0004141,5.12e-07,18;UBERON:0003084,5.12e-07,18;UBERON:0007005,5.12e-07,18;UBERON:0004139,5.12e-07,18;UBERON:0004291,5.12e-07,18;UBERON:0003080,7.42e-07,40|phase1_expression=7.20669811971573,1.74487703819681,1.81999695755814,0.90739263392049,0,2.51818907867835,1.16806320297763,1.54947988129892,1.68946466582,3.04283884218592,3.08192342805909,2.23362045186942,1.19840510951844,1.57356724354195,7.32841475994458,7.08663435864391,5.59649502502517,2.99689057090326,3.42786084014347,1.69755860719212,9.09963204616447,3.47518329203099,3.6567970479451,2.3998863419011,3.21172993494038,1.14846392823004,0.86152399231815,1.50829862880122,1.71021077510736,3.2763916868791,2.66076612786366,3.17515336729816,4.92051830067656,0,3.17736781726402,3.98963148860382,4.08338712524738,2.09265815368454,1.5626706890476,1.57057123192139,0,0,0.971020706062307,5.5394599909254,5.47435428585379,5.13930906052708,0.782391344348039,1.09012578190223,0.878744730937887,1.94429899074283,1.1198913730029,0,3.02008690903925,2.17608642603403,1.34437519656986,5.40244815675489,4.01146815914259,3.6097046459421,3.03474691289397,3.70293685490423,1.90149421051854,1.0165335962074,0.889294796111139,1.3498495759221,1.97773272513395,0,0.599200221036809,1.53687322128622,5.28817022773236,3.51015439662396,4.6271491497304,6.28432165688368,5.52171352379034,5.02212276781312,3.92966431174769,1.83843757322004,9.91042928994498,15.1947932321373,18.4327839907492,3.56092976871523,4.39140689291566,4.16730696445408,10.6089539620525,14.069065250792,14.9742282821274,10.3120004915784,11.10499110233,9.13357284543973,7.1182621733193,6.72586884950391,4.34796733052517,5.16254326188832,0,2.69851595818909,0.649776417447669,3.13618820968135,4.77511028447956,2.72688516124892,2.85764605063156,1.06001872353102,6.90132756905734,3.84979432242953,0,0,5.19578498426914,4.30711771307668,6.0662933401774,3.88225191044804,3.88406825470758,5.34391700633369,7.80683970447611,6.39377504455497,7.37969591219387,5.57673770044703,7.17291113527799,6.53466274914312,3.21353458054686,6.65157041831594,0.884610551949874,5.98537344805414,6.8460870722722,6.78825354389311,7.45567044872489,14.3462590535658,11.51956887474,2.81002760729451,4.79260498023681,2.99951365496704,4.82866862877646,20.2217363196511,16.9275223042892,14.4502504929794,13.7321212951898,17.6443665557928,16.2074674756457,17.6842976743856,9.06370338267815,3.85661608891288,7.58168275301024,3.15662783829711,9.75903322220278,9.42598628177239,7.20248519221397,9.94651797715719,9.93332887609387,9.35230158079403,7.68354141389776,4.9153640440413,6.25147179505242,8.13156144721623,7.74184946321375,5.91828477554452,5.00485048606076,5.2237824978325,3.70407845534298,9.15557627365069,9.12877143507205,4.63226232806487,5.68326998791185,12.4275463521301,14.7751417788091,13.1445304866541,12.5474709860161,12.3961466000864,12.4956361438776,15.3472403535269,12.3405764643825,15.6465558772007,15.7977455916941,11.3275550214576,11.4307021459657,10.0877991323479,10.7579556492615,11.541752013392,14.930586348053,15.8473103064098,1.98251269790279,2.64450566663544,8.74481827194459,9.28946687441754,7.60318021800351,4.84040459096022,4.22518283305254,4.75564065281398,2.37264530772256,4.11747386810027,3.77002813200404,6.16765063327568,6.23885078781184,2.69645822596266,2.37751854862164,2.98711909881551,1.13800740571849,8.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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=229363
|HGNC=
|MCL_coexpression_id=361
|TSSclassifier=NA
|UniProt=Q3THK7
|association_with_transcript=3bp_to_ENSMUST00000029405_5end
|cluster_id=chr3:63780031..63780057,+
|description=CAGE_peak_2_at_Gmps_5end
|id=chr3:63780031..63780057,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!4.25e-10!63;UBERON:0002346!6.78e-10!71;UBERON:0003075!6.78e-10!71;UBERON:0007284!6.78e-10!71;UBERON:0000955!4.26e-09!50;UBERON:0006238!4.26e-09!50;UBERON:0001049!9.98e-09!52;UBERON:0005068!9.98e-09!52;UBERON:0006241!9.98e-09!52;UBERON:0007135!9.98e-09!52;UBERON:0002616!1.23e-08!49;UBERON:0000468!1.48e-08!333;UBERON:0000025!2.27e-08!114;UBERON:0003056!5.08e-08!49;UBERON:0004111!1.10e-07!122;UBERON:0007100!5.13e-07!18;UBERON:0000948!5.13e-07!18;UBERON:0005498!5.13e-07!18;UBERON:0004140!5.13e-07!18;UBERON:0009881!5.13e-07!18;UBERON:0004141!5.13e-07!18;UBERON:0003084!5.13e-07!18;UBERON:0007005!5.13e-07!18;UBERON:0004139!5.13e-07!18;UBERON:0004291!5.13e-07!18;UBERON:0003080!7.13e-07!40
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.75e-16,92;UBERON:0000073,1.64e-09,54;UBERON:0002346,1.79e-09,64;UBERON:0003075,1.79e-09,64;UBERON:0007284,1.79e-09,64;UBERON:0001049,1.07e-08,52;UBERON:0005068,1.07e-08,52;UBERON:0006241,1.07e-08,52;UBERON:0007135,1.07e-08,52;UBERON:0000025,2.36e-08,114;UBERON:0003056,5.28e-08,49;UBERON:0000922,5.69e-08,320;UBERON:0010371,8.46e-08,73;UBERON:0000955,9.51e-08,47;UBERON:0006238,9.51e-08,47;UBERON:0004111,1.14e-07,122;UBERON:0002616,2.60e-07,46;UBERON:0007100,5.12e-07,18;UBERON:0000948,5.12e-07,18;UBERON:0005498,5.12e-07,18;UBERON:0004140,5.12e-07,18;UBERON:0009881,5.12e-07,18;UBERON:0004141,5.12e-07,18;UBERON:0003084,5.12e-07,18;UBERON:0007005,5.12e-07,18;UBERON:0004139,5.12e-07,18;UBERON:0004291,5.12e-07,18;UBERON:0003080,7.42e-07,40
|phase1_expression=7.20669811971573,1.74487703819681,1.81999695755814,0.90739263392049,0,2.51818907867835,1.16806320297763,1.54947988129892,1.68946466582,3.04283884218592,3.08192342805909,2.23362045186942,1.19840510951844,1.57356724354195,7.32841475994458,7.08663435864391,5.59649502502517,2.99689057090326,3.42786084014347,1.69755860719212,9.09963204616447,3.47518329203099,3.6567970479451,2.3998863419011,3.21172993494038,1.14846392823004,0.86152399231815,1.50829862880122,1.71021077510736,3.2763916868791,2.66076612786366,3.17515336729816,4.92051830067656,0,3.17736781726402,3.98963148860382,4.08338712524738,2.09265815368454,1.5626706890476,1.57057123192139,0,0,0.971020706062307,5.5394599909254,5.47435428585379,5.13930906052708,0.782391344348039,1.09012578190223,0.878744730937887,1.94429899074283,1.1198913730029,0,3.02008690903925,2.17608642603403,1.34437519656986,5.40244815675489,4.01146815914259,3.6097046459421,3.03474691289397,3.70293685490423,1.90149421051854,1.0165335962074,0.889294796111139,1.3498495759221,1.97773272513395,0,0.599200221036809,1.53687322128622,5.28817022773236,3.51015439662396,4.6271491497304,6.28432165688368,5.52171352379034,5.02212276781312,3.92966431174769,1.83843757322004,9.91042928994498,15.1947932321373,18.4327839907492,3.56092976871523,4.39140689291566,4.16730696445408,10.6089539620525,14.069065250792,14.9742282821274,10.3120004915784,11.10499110233,9.13357284543973,7.1182621733193,6.72586884950391,4.34796733052517,5.16254326188832,0,2.69851595818909,0.649776417447669,3.13618820968135,4.77511028447956,2.72688516124892,2.85764605063156,1.06001872353102,6.90132756905734,3.84979432242953,0,0,5.19578498426914,4.30711771307668,6.0662933401774,3.88225191044804,3.88406825470758,5.34391700633369,7.80683970447611,6.39377504455497,7.37969591219387,5.57673770044703,7.17291113527799,6.53466274914312,3.21353458054686,6.65157041831594,0.884610551949874,5.98537344805414,6.8460870722722,6.78825354389311,7.45567044872489,14.3462590535658,11.51956887474,2.81002760729451,4.79260498023681,2.99951365496704,4.82866862877646,20.2217363196511,16.9275223042892,14.4502504929794,13.7321212951898,17.6443665557928,16.2074674756457,17.6842976743856,9.06370338267815,3.85661608891288,7.58168275301024,3.15662783829711,9.75903322220278,9.42598628177239,7.20248519221397,9.94651797715719,9.93332887609387,9.35230158079403,7.68354141389776,4.9153640440413,6.25147179505242,8.13156144721623,7.74184946321375,5.91828477554452,5.00485048606076,5.2237824978325,3.70407845534298,9.15557627365069,9.12877143507205,4.63226232806487,5.68326998791185,12.4275463521301,14.7751417788091,13.1445304866541,12.5474709860161,12.3961466000864,12.4956361438776,15.3472403535269,12.3405764643825,15.6465558772007,15.7977455916941,11.3275550214576,11.4307021459657,10.0877991323479,10.7579556492615,11.541752013392,14.930586348053,15.8473103064098,1.98251269790279,2.64450566663544,8.74481827194459,9.28946687441754,7.60318021800351,4.84040459096022,4.22518283305254,4.75564065281398,2.37264530772256,4.11747386810027,3.77002813200404,6.16765063327568,6.23885078781184,2.69645822596266,2.37751854862164,2.98711909881551,1.13800740571849,8.11164439529075,4.50830942692322,5.90588850751411,5.23671715352589,6.87331034925122,5.31186911843761,8.11855813887812,5.02395929092399,4.44229790118482,3.55743152504579,10.0107063429656,7.86235980452812,5.17182858485164,6.28866376304359,5.30589751455317,5.60176873919124,3.45235364940973,6.48540907100142,2.47105271869273,2.87536413054709,4.09355042435354,5.30464044294753,2.27320990152401,5.9201146462231,1.92977408545347,3.69506380333209,9.66406200029472,8.31121379854332,8.99648954608497,7.04070744865506,5.02518772325447,2.38043640886014,3.31727201358258,5.04432461139811,6.2010113101657,5.26200736569707,3.60499292374624,4.31712454664739,2.89298117163023,1.50791283939272,3.26343410291226,1.47529281905711,2.75936746304733,21.8348802383397,19.3399282877135,6.22952792431367,10.6037789425837,3.78609863299508,4.68526493155966,6.67812532971677,4.77937595905104,4.45597348164788,2.83076530788832,4.85772842009873,3.79932615284705,3.16230222357219,13.8168166061377,6.52924391958036,6.23229612835393,10.4247653986289,5.27904393512113,1.32745138339963,7.76898035695941,6.65111825322452,4.90373207365335,3.2483208216885,3.68922177532713,4.39328098385976,5.08947221268508,6.06045543254026,2.21225730555071,0,0,8.5109901438447,9.18311579559682,3.23396709456886,6.00143698088458,10.1083933176096,9.0968096977056,10.0374902567294,6.08929898229199,3.98941903708308,3.81297727554876,3.52845436887939,2.96795255294664,5.65125493435669,6.1519183426719,4.29740438411291,4.10352249362653,3.78925087618806,18.17167959703,3.75915937755276,6.3979929068599,5.92622487583077,5.08594833912666,6.97140561377228,2.74533807847827,3.56954702987096,3.77868921273877,3.59319931891502,1.90934123603023,8.54107182669065,8.13277868507395,6.69633113095168,3.55450103224597,5.02233896616208,4.5853877770839,3.88471241909079,2.87931536182433,2.85152941241944,3.10669656543463,13.5286305284206,12.4098733216502,10.7548018797113,9.52810822885833,7.23295011475294,11.6579726588637,13.2613679669702,11.7183946359555,12.8976993643624,11.8376219204743,11.8092302565725,3.47612232690996,7.9062833963164,5.34096977257102,4.67714962720062,5.72885426135941,4.56967115996909,3.12508168751919,3.2491695978407,4.03865799792591,4.11516755936999,3.7305688500631,2.92373642219257,3.84847366561318,2.45441494581295,6.57518112484113,11.9872414821995,6.45939767588225,8.89788466729616,3.09103350451505,2.62755465631655,2.38097111547445,4.07299920250225,5.01572104035363,12.9892923801925,14.2700823317225,10.8850147553485,8.42080593484069,11.6464028361009,15.8632718451837,11.4753825039407,12.6089936902782,11.7817026335893,14.497288729051,11.4166082342594,13.5668456956351,8.87814749921498,6.56388136084394,8.17491334249131,7.90527086335061,6.22290837844523,4.32673620201678,7.38114182061175,8.84440241173291,9.88569269571935,7.9223063382152,7.67860361253036,7.17081706934536,8.15583659169708,7.62069906052918,7.41659686047075,7.33055037762079,7.41754621445952,7.50714492685426,3.08582327146874,6.74408063405482,6.67621331852499,7.41266724824875,7.43464105281112,8.88453382862603,6.58540702341981,6.83981249738391,7.74083448921412,5.61142271657738,8.66035632306471,8.0773675547962,4.50154147486658,7.43696837692637,7.52335782826451,6.49507502638659,7.48581147025307,7.30561583764214,7.07766828654721,5.07360263974886,6.26043156175138
|short_description=p2@Gmps
}}

Latest revision as of 15:44, 25 September 2015

Short description:p2@Gmps
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Gmps_5end
Coexpression cluster:MCL_coexpression_mm9:361
Association with transcript: 3bp_to_ENSMUST00000029405_5end
EntrezGene:Gmps
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Gmps

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.69
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.08
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.23
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.57
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A37.09
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A55.60
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.43
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.66
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.21
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B91.71
Ileum epithelium, pool2.CNhs13232.10253-104C13.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.08
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.54
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.47
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.14
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.02
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.40
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C33.03
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.29
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.52
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.02
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.93
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D718.43
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.56
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.39
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.61
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.31
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.10
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.13
Mouse Schwann, donor1.CNhs12507.11728-123D97.12
Mouse Schwann, donor2.CNhs12573.11746-123F96.73
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.90
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.20
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.31
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.07
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.88
accessory axillary lymph node, adult.CNhs10475.1063-29H93.88
adrenal gland, adult.CNhs10508.49-24D75.34
adrenal gland, embryo E14.CNhs11038.406-44C57.81
adrenal gland, embryo E16.CNhs11004.1254-43D66.39
adrenal gland, embryo E17.CNhs11043.1263-45I17.38
adrenal gland, embryo E18.CNhs11026.1262-18F55.58
adrenal gland, neonate N00.CNhs11191.1311-23C17.17
adrenal gland, neonate N25.CNhs11223.1377-27I36.53
amnion, adult pregnant day17.5.CNhs10488.583-22A83.21
aorta, adult.CNhs10498.46-23H16.65
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F55.99
bone (os femoris), neonate N16.CNhs11225.1525-43A66.85
bone (os femoris), neonate N20.CNhs11195.1350-25C36.79
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B214.35
cerebellum, neonate N30.CNhs11135.1395-42I211.52
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.79
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.83
corpora quadrigemina, adult.CNhs10501.16-22A420.22
corpus striatum, adult.CNhs10487.19-21D816.93
corpus striatum, neonate N00.CNhs11226.630-43F114.45
cortex, adult.CNhs10473.12-14D513.73
cortex, neonate N30.CNhs11107.1392-42F217.64
diencephalon, adult.CNhs10482.20-12F216.21
diencephalon, neonate N30.CNhs11201.1388-42B217.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.86
epididymis, adult.CNhs10490.58-23B27.58
eyeball, adult.CNhs10484.31-12G43.16
eyeball, embryo E12.CNhs11016.345-16C69.76
eyeball, embryo E14.CNhs10521.399-16E29.43
eyeball, embryo E15.CNhs10593.426-16C97.20
eyeball, embryo E17.CNhs11023.1261-18D49.95
eyeball, neonate N00.CNhs11207.633-15C69.93
eyeball, neonate N01.CNhs11140.1532-43E79.35
eyeball, neonate N02.CNhs11205.1551-44G87.68
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E26.25
forelimb, embryo E12.CNhs10600.359-14H28.13
forelimb, embryo E13.CNhs10589.384-1E27.74
forelimb, embryo E14.CNhs10577.413-26A85.92
forelimb, embryo E15.CNhs11007.437-20E75.00
forelimb, embryo E17.CNhs10598.1517-43C45.22
forelimb, embryo E18.CNhs11008.1520-43B53.70
gonad, embryo E13.CNhs11044.1564-45I69.16
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C89.13
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.63
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.68
heart, embryo E11.CNhs10586.331-24E912.43
heart, embryo E12.CNhs11015.353-12F514.78
heart, embryo E13.CNhs11013.376-3I913.14
heart, embryo E14.CNhs10597.403-26D412.55
heart, embryo E15.CNhs11017.431-16C812.40
heart, embryo E16.CNhs11021.457-17C612.50
heart, embryo E17.CNhs11025.479-18E515.35
heart, embryo E18.CNhs11030.1283-20G312.34
heart, neonate N00.CNhs11213.639-21E315.65
heart, neonate N03.CNhs11221.1349-25I215.80
heart, neonate N10.CNhs11118.749-24G111.33
heart, neonate N16.CNhs11209.782-15G111.43
heart, neonate N20.CNhs11127.821-26I610.09
heart, neonate N25.CNhs11196.1351-25D310.76
heart, neonate N30.CNhs11202.1390-42D211.54
hippocampus, adult.CNhs10478.13-16E814.93
hippocampus, neonate N00.CNhs11228.627-43G115.85
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A32.64
intestine, embryo E12.CNhs11019.1251-16I58.74
intestine, embryo E13.CNhs11010.381-16D59.29
intestine, embryo E15.CNhs10602.976-16D87.60
intestine, embryo E16.CNhs10585.463-22H44.84
intestine, embryo E17.CNhs10582.482-18D34.23
intestine, embryo E18.CNhs10526.1289-20F74.76
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E94.12
intestine, neonate N06.CNhs11102.688-20B83.77
intestine, neonate N07.CNhs11095.720-20F26.17
intestine, neonate N10.CNhs11098.755-23A56.24
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G12.99
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F88.11
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I25.91
kidney, embryo E18.CNhs11001.1288-20C75.24
kidney, neonate N00.CNhs11214.646-21G76.87
kidney, neonate N10.CNhs11206.758-6D55.31
kidney, neonate N20.CNhs11113.832-19I18.12
kidney, neonate N25.CNhs11122.1353-25F35.02
kidney, neonate N30.CNhs11203.1385-42H14.44
liver, adult pregnant day01.CNhs10466.508-5B23.56
liver, embryo E12.CNhs10601.355-15F810.01
liver, embryo E13.CNhs10524.378-3H67.86
liver, embryo E14.CNhs10594.409-16E15.17
liver, embryo E15.CNhs10520.433-16D76.29
liver, embryo E16.CNhs10523.462-17F55.31
liver, embryo E17.CNhs10510.481-18A35.60
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F46.49
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B95.30
liver, neonate N20.CNhs11220.823-25A32.27
liver, neonate N25.CNhs11198.1368-26H15.92
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B13.70
lung, embryo E12.CNhs10522.354-16G29.66
lung, embryo E14.CNhs10604.404-26F88.31
lung, embryo E15.CNhs11020.432-17C59.00
lung, embryo E16.CNhs10998.458-17B67.04
lung, embryo E17.CNhs10605.480-44A65.03
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C63.32
lung, neonate N06.CNhs11212.683-20E55.04
lung, neonate N07.CNhs11111.715-19A36.20
lung, neonate N10.CNhs11219.750-23E65.26
lung, neonate N20.CNhs11109.822-18A43.60
lung, neonate N25.CNhs11119.1359-25C74.32
lung, neonate N30.CNhs11133.1394-42H22.89
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H22.76
medulla oblongata, adult.CNhs10477.17-12C221.83
medulla oblongata, neonate N30.CNhs11200.1396-42A319.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.23
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C210.60
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.79
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.69
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.68
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.78
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I913.82
ovary, adult.CNhs10507.91-2I76.53
ovary, embryo E18.CNhs11040.505-44H76.23
ovary, neonate N00.CNhs11217.1299-22I410.42
oviduct, adult pregnant day01.CNhs10500.988-6G65.28
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F47.77
pancreas, embryo E15.CNhs11042.1556-45F26.65
pancreas, embryo E16.CNhs11003.460-26E54.90
pancreas, embryo E17.CNhs10599.1558-45G33.25
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G94.39
pancreas, neonate N01.CNhs11138.1531-43D75.09
pancreas, neonate N02.CNhs11139.1539-43D86.06
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G88.51
pituitary gland, embryo E12.CNhs11018.346-16E69.18
pituitary gland, embryo E13.CNhs11009.370-44C73.23
pituitary gland, embryo E14.CNhs11037.398-44A56.00
pituitary gland, embryo E15.CNhs10592.427-16B910.11
pituitary gland, embryo E16.CNhs11036.449-43F69.10
pituitary gland, embryo E17.CNhs11039.1265-44F510.04
pituitary gland, neonate N00.CNhs11190.1308-22E96.09
placenta, adult pregnant day10.CNhs10472.539-13I73.99
placenta, adult pregnant day17.CNhs10464.577-18G33.81
prostate, adult.CNhs10470.859-1F83.53
skin, adult.CNhs10492.30-1C32.97
skin, neonate N00.CNhs11124.650-25G45.65
skin, neonate N03.CNhs11215.662-22H36.15
skin, neonate N06.CNhs11097.693-20I54.30
skin, neonate N10.CNhs11108.762-6C44.10
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C918.17
spleen, adult.CNhs10465.25-2G23.76
spleen, embryo E16.CNhs11035.461-43C16.40
spleen, embryo E18.CNhs11011.1271-21F25.93
spleen, neonate N10.CNhs11116.752-24D15.09
spleen, neonate N20.CNhs11112.824-19H16.97
spleen, neonate N25.CNhs11099.1354-25G32.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.57
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.78
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.59
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E38.54
stomach, embryo E15.CNhs10603.1252-16G88.13
stomach, embryo E16.CNhs11022.459-17D46.70
stomach, embryo E17.CNhs11006.1035-18D53.55
stomach, embryo E18.CNhs10999.1286-20C65.02
stomach, neonate N03.CNhs11193.1340-24B84.59
stomach, neonate N07.CNhs11210.718-18A93.88
stomach, neonate N25.CNhs11104.1355-25E42.88
stomach, neonate N30.CNhs11134.1386-42I12.85
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G513.53
testis, embryo E13.CNhs11031.389-23F512.41
testis, embryo E15.CNhs11034.443-27C510.75
testis, embryo E16.CNhs11033.470-26G59.53
testis, embryo E17.CNhs11029.486-18I57.23
testis, embryo E18.CNhs11027.503-18G511.66
testis, neonate N00.CNhs11189.1300-22B713.26
testis, neonate N07.CNhs11222.726-26I411.72
testis, neonate N10.CNhs11204.763-44D912.90
testis, neonate N20.CNhs11110.839-18H311.84
testis, neonate N30.CNhs11130.1391-42E211.81
thymus, adult.CNhs10471.38-12B53.48
thymus, embryo E14.CNhs11041.402-44I47.91
thymus, embryo E15.CNhs11005.430-45I25.34
thymus, embryo E16.CNhs11002.456-26C54.68
thymus, embryo E17.CNhs10581.478-18C15.73
thymus, embryo E18.CNhs10595.1273-19G44.57
thymus, neonate N02.CNhs11181.1541-43F83.13
thymus, neonate N03.CNhs11137.2104-43C73.25
thymus, neonate N06.CNhs11197.681-26C44.04
thymus, neonate N07.CNhs11211.713-19D34.12
thymus, neonate N10.CNhs11194.748-24E43.73
thymus, neonate N20.CNhs11186.820-7A22.92
thymus, neonate N25.CNhs11125.1362-25G73.85
thymus, neonate N30.CNhs11132.1393-42G22.45
tongue, adult.CNhs10499.32-1B46.58
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H311.99
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.46
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G58.90
urinary bladder, adult.CNhs10481.879-12E43.09
uterus, adult pregnant day19.CNhs10497.590-15F52.63
uterus, adult.CNhs10509.92-27E52.38
vagina, adult.CNhs10502.89-27D54.07
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.99
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.27
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.42
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A411.65
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.86
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A611.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.61
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A811.78
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A914.50
whole body, embryo E11.CNhs11014.324-5I811.42
whole body, embryo E12.CNhs10587.857-27C913.57
whole body, embryo E13.CNhs10512.372-23H28.88
whole body, embryo E14.5.CNhs10578.420-27D26.56
whole body, embryo E14.CNhs10519.395-14B18.17
whole body, embryo E16.CNhs10514.453-14F27.91
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.38
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.84
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.92
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.68
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.17
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.16
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.51
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.68
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.41
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.43
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.88
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.74
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.44
whole body, embryo E17.5.CNhs10513.490-9F97.52
whole body, embryo E17.CNhs10517.475-3I56.50
whole body, embryo E18.CNhs10516.493-3B37.49
whole body, neonate N00.CNhs10525.657-19C27.31
whole body, neonate N01.CNhs10576.659-23C67.08
whole body, neonate N06.CNhs10515.692-21D15.07
whole body, neonate N10.CNhs10518.761-6B46.26





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest2.75e-1692
regional part of nervous system1.64e-0954
neurectoderm1.79e-0964
neural plate1.79e-0964
presumptive neural plate1.79e-0964
neural tube1.07e-0852
neural rod1.07e-0852
future spinal cord1.07e-0852
neural keel1.07e-0852
tube2.36e-08114
pre-chordal neural plate5.28e-0849
embryo5.69e-08320
ecto-epithelium8.46e-0873
brain9.51e-0847
future brain9.51e-0847
anatomical conduit1.14e-07122
regional part of brain2.60e-0746
primary circulatory organ5.12e-0718
heart5.12e-0718
primitive heart tube5.12e-0718
primary heart field5.12e-0718
anterior lateral plate mesoderm5.12e-0718
heart tube5.12e-0718
heart primordium5.12e-0718
cardiac mesoderm5.12e-0718
cardiogenic plate5.12e-0718
heart rudiment5.12e-0718
anterior neural tube7.42e-0740
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