FFCP PHASE1:Mm9::chr11:74644437..74644507,+: Difference between revisions
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{{FFCP|EntrezGene=17428|HGNC=|UniProt=O08789|association_with_transcript=11bp_to_NM_010813,uc011xzb.1_5end|description=CAGE_peak_1_at_Mnt_5end|id=chr11:74644437..74644507,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!3.61e-12!102;UBERON:0000924!3.61e-12!102;UBERON:0006601!3.61e-12!102;UBERON:0001017!6.36e-12!73;UBERON:0005743!6.36e-12!73;UBERON:0000153!1.20e-11!94;UBERON:0003056!2.34e-11!49;UBERON:0000073!4.64e-11!75;UBERON:0001016!4.64e-11!75;UBERON:0000033!6.32e-11!63;UBERON:0007811!6.99e-11!86;UBERON:0002346!3.89e-10!71;UBERON:0003075!3.89e-10!71;UBERON:0007284!3.89e-10!71;UBERON:0000955!4.18e-10!50;UBERON:0006238!4.18e-10!50;UBERON:0003080!5.67e-10!40;UBERON:0002780!7.81e-10!39;UBERON:0001890!7.81e-10!39;UBERON:0006240!7.81e-10!39;UBERON:0002616!9.34e-10!49;UBERON:0001049!1.22e-09!52;UBERON:0005068!1.22e-09!52;UBERON:0006241!1.22e-09!52;UBERON:0007135!1.22e-09!52;UBERON:0002791!8.40e-09!29;UBERON:0003528!8.40e-09!29;UBERON:0001893!8.40e-09!29;UBERON:0000956!3.29e-08!21;UBERON:0001869!3.29e-08!21;UBERON:0000203!3.29e-08!21;UBERON:0002020!5.54e-08!34;UBERON:0002619!7.15e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0004121,5.61e-13,95;UBERON:0000924,5.61e-13,95;UBERON:0006601,5.61e-13,95;UBERON:0001017,6.36e-12,73;UBERON:0010371,1.69e-11,73;UBERON:0003056,2.34e-11,49;UBERON:0002346,3.49e-11,64;UBERON:0003075,3.49e-11,64;UBERON:0007284,3.49e-11,64;UBERON:0001016,4.64e-11,75;UBERON:0000955,2.67e-10,47;UBERON:0006238,2.67e-10,47;UBERON:0003080,5.67e-10,40;UBERON:0002616,6.03e-10,46;UBERON:0002780,7.81e-10,39;UBERON:0001890,7.81e-10,39;UBERON:0006240,7.81e-10,39;UBERON:0001049,1.22e-09,52;UBERON:0005068,1.22e-09,52;UBERON:0006241,1.22e-09,52;UBERON:0007135,1.22e-09,52;UBERON:0000073,3.01e-09,54;UBERON:0003528,8.40e-09,29;UBERON:0002791,8.40e-09,29;UBERON:0001893,8.40e-09,29;UBERON:0000956,3.29e-08,21;UBERON:0001869,3.29e-08,21;UBERON:0000203,3.29e-08,21;UBERON:0002020,5.54e-08,34;UBERON:0002619,7.15e-07,17|phase1_expression=24.5027736070335,9.07336059862339,12.739978702907,15.7281389879552,19.5349334679075,15.4448930158939,14.9512089981136,39.6408602965639,98.9744716726217,86.3698102128156,44.6878897068568,46.1083078993044,30.9873321175482,35.8423649917889,19.6534759471241,13.970793449898,8.39474253753776,30.5998300397491,30.8507475612912,25.8877687596798,24.7475974339613,24.7234468490204,19.0675846071423,19.0390983124154,12.8469197397615,6.89078356938024,5.1691439539089,14.4365725899546,15.2018735565099,13.3575968772763,7.98229838359097,85.0941102435906,62.1215435460416,15.8481681015439,18.1976520443303,14.2961795008303,13.4751775133164,14.6486070757918,12.5013655123808,12.5645698553712,26.4704169613956,16.3930916390027,12.1377588257788,43.0567117476474,45.112734392684,38.5448179539531,35.2076104956618,15.4797861030117,23.726107735323,23.9148775861369,18.3382212329225,14.3752564364972,37.4155211508752,50.7753499407941,60.1607900465011,23.9251275513431,24.9284092746718,18.5641953219879,44.3073049282519,53.9570798857474,44.3681982454325,20.6695164562171,14.2287167377782,43.6451362881479,81.0870417304919,53.2860086209575,29.3608108308037,27.6637179831519,40.2315695756893,36.8566211645515,30.4971193959504,20.8525218614777,21.2033799313549,37.4821845597759,38.1464974652581,40.4456266108409,27.5289702498472,23.2390955315042,23.6554061214615,42.4673846491224,37.6014215205904,42.7148963856543,14.5175159480718,23.6360296213306,22.9197371665215,27.4004584490511,20.2167786734726,34.11109858603,13.9336195733059,21.0844652697932,38.2621125086215,7.74381489283248,52.3577926954968,11.3337670243942,13.6453047664011,18.3691023709908,13.7635531729117,16.1908806449155,11.950156211732,12.0135455333516,22.8166340038222,20.5322363862909,5.09610479413291,21.3320010945999,16.6698101578635,16.4683912558814,20.2209778005913,19.7538111913974,52.5643903803759,28.9462171176408,14.3992821215893,21.3125834818499,25.1370892009104,17.4838263041042,41.5088136189038,19.9809880214184,29.1690061926561,36.1498392299779,16.8076004870476,16.985519244478,15.2380647737672,16.9706338597328,27.9587641827183,33.3770108593164,40.0043210013699,16.6047085885584,57.031999264818,29.9951365496704,47.7784053794723,29.6585466021549,40.7175536508578,36.1884534085049,43.4560800480691,31.708716708961,32.2071469067318,24.0117069340281,33.9125081621553,26.6230917105599,32.8539585963777,36.1959992124735,28.3662565658694,13.3343220571414,30.6105620669094,26.0719334855787,48.1018048999888,38.8184572463095,34.9507432607789,41.9099460597205,34.0597428833891,27.231275544166,24.6331573829528,22.1387689751851,24.7462051810782,22.2881386574187,28.8094990971121,22.2918378836712,23.87524836865,34.2272716462571,33.2471294292843,19.4698226183372,21.5763975182609,15.8454614085693,20.8335367314985,19.8731874064878,17.4321837562737,14.8821724640261,13.6819434713806,26.2722020326131,17.114224391002,17.7300861205423,19.6186519100971,16.3743985916372,15.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17428 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=O08789 | |||
|association_with_transcript=11bp_to_NM_010813,uc011xzb.1_5end | |||
|cluster_id=chr11:74644437..74644507,+ | |||
|description=CAGE_peak_1_at_Mnt_5end | |||
|id=chr11:74644437..74644507,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.61e-12!102;UBERON:0000924!3.61e-12!102;UBERON:0006601!3.61e-12!102;UBERON:0001017!6.36e-12!73;UBERON:0005743!6.36e-12!73;UBERON:0000153!1.20e-11!94;UBERON:0003056!2.34e-11!49;UBERON:0000073!4.64e-11!75;UBERON:0001016!4.64e-11!75;UBERON:0000033!6.32e-11!63;UBERON:0007811!6.99e-11!86;UBERON:0002346!3.89e-10!71;UBERON:0003075!3.89e-10!71;UBERON:0007284!3.89e-10!71;UBERON:0000955!4.18e-10!50;UBERON:0006238!4.18e-10!50;UBERON:0003080!5.67e-10!40;UBERON:0002780!7.81e-10!39;UBERON:0001890!7.81e-10!39;UBERON:0006240!7.81e-10!39;UBERON:0002616!9.34e-10!49;UBERON:0001049!1.22e-09!52;UBERON:0005068!1.22e-09!52;UBERON:0006241!1.22e-09!52;UBERON:0007135!1.22e-09!52;UBERON:0002791!8.40e-09!29;UBERON:0003528!8.40e-09!29;UBERON:0001893!8.40e-09!29;UBERON:0000956!3.29e-08!21;UBERON:0001869!3.29e-08!21;UBERON:0000203!3.29e-08!21;UBERON:0002020!5.54e-08!34;UBERON:0002619!7.15e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,5.61e-13,95;UBERON:0000924,5.61e-13,95;UBERON:0006601,5.61e-13,95;UBERON:0001017,6.36e-12,73;UBERON:0010371,1.69e-11,73;UBERON:0003056,2.34e-11,49;UBERON:0002346,3.49e-11,64;UBERON:0003075,3.49e-11,64;UBERON:0007284,3.49e-11,64;UBERON:0001016,4.64e-11,75;UBERON:0000955,2.67e-10,47;UBERON:0006238,2.67e-10,47;UBERON:0003080,5.67e-10,40;UBERON:0002616,6.03e-10,46;UBERON:0002780,7.81e-10,39;UBERON:0001890,7.81e-10,39;UBERON:0006240,7.81e-10,39;UBERON:0001049,1.22e-09,52;UBERON:0005068,1.22e-09,52;UBERON:0006241,1.22e-09,52;UBERON:0007135,1.22e-09,52;UBERON:0000073,3.01e-09,54;UBERON:0003528,8.40e-09,29;UBERON:0002791,8.40e-09,29;UBERON:0001893,8.40e-09,29;UBERON:0000956,3.29e-08,21;UBERON:0001869,3.29e-08,21;UBERON:0000203,3.29e-08,21;UBERON:0002020,5.54e-08,34;UBERON:0002619,7.15e-07,17 | |||
|phase1_expression=24.5027736070335,9.07336059862339,12.739978702907,15.7281389879552,19.5349334679075,15.4448930158939,14.9512089981136,39.6408602965639,98.9744716726217,86.3698102128156,44.6878897068568,46.1083078993044,30.9873321175482,35.8423649917889,19.6534759471241,13.970793449898,8.39474253753776,30.5998300397491,30.8507475612912,25.8877687596798,24.7475974339613,24.7234468490204,19.0675846071423,19.0390983124154,12.8469197397615,6.89078356938024,5.1691439539089,14.4365725899546,15.2018735565099,13.3575968772763,7.98229838359097,85.0941102435906,62.1215435460416,15.8481681015439,18.1976520443303,14.2961795008303,13.4751775133164,14.6486070757918,12.5013655123808,12.5645698553712,26.4704169613956,16.3930916390027,12.1377588257788,43.0567117476474,45.112734392684,38.5448179539531,35.2076104956618,15.4797861030117,23.726107735323,23.9148775861369,18.3382212329225,14.3752564364972,37.4155211508752,50.7753499407941,60.1607900465011,23.9251275513431,24.9284092746718,18.5641953219879,44.3073049282519,53.9570798857474,44.3681982454325,20.6695164562171,14.2287167377782,43.6451362881479,81.0870417304919,53.2860086209575,29.3608108308037,27.6637179831519,40.2315695756893,36.8566211645515,30.4971193959504,20.8525218614777,21.2033799313549,37.4821845597759,38.1464974652581,40.4456266108409,27.5289702498472,23.2390955315042,23.6554061214615,42.4673846491224,37.6014215205904,42.7148963856543,14.5175159480718,23.6360296213306,22.9197371665215,27.4004584490511,20.2167786734726,34.11109858603,13.9336195733059,21.0844652697932,38.2621125086215,7.74381489283248,52.3577926954968,11.3337670243942,13.6453047664011,18.3691023709908,13.7635531729117,16.1908806449155,11.950156211732,12.0135455333516,22.8166340038222,20.5322363862909,5.09610479413291,21.3320010945999,16.6698101578635,16.4683912558814,20.2209778005913,19.7538111913974,52.5643903803759,28.9462171176408,14.3992821215893,21.3125834818499,25.1370892009104,17.4838263041042,41.5088136189038,19.9809880214184,29.1690061926561,36.1498392299779,16.8076004870476,16.985519244478,15.2380647737672,16.9706338597328,27.9587641827183,33.3770108593164,40.0043210013699,16.6047085885584,57.031999264818,29.9951365496704,47.7784053794723,29.6585466021549,40.7175536508578,36.1884534085049,43.4560800480691,31.708716708961,32.2071469067318,24.0117069340281,33.9125081621553,26.6230917105599,32.8539585963777,36.1959992124735,28.3662565658694,13.3343220571414,30.6105620669094,26.0719334855787,48.1018048999888,38.8184572463095,34.9507432607789,41.9099460597205,34.0597428833891,27.231275544166,24.6331573829528,22.1387689751851,24.7462051810782,22.2881386574187,28.8094990971121,22.2918378836712,23.87524836865,34.2272716462571,33.2471294292843,19.4698226183372,21.5763975182609,15.8454614085693,20.8335367314985,19.8731874064878,17.4321837562737,14.8821724640261,13.6819434713806,26.2722020326131,17.114224391002,17.7300861205423,19.6186519100971,16.3743985916372,15.5880581856646,24.0229489581065,50.6798776039547,41.985081850748,22.7988960258821,17.982638533121,21.1155368029882,20.669063795579,24.0982152672315,21.781820659321,23.3496946037114,19.0225626112559,18.506633400236,21.4108641141214,20.8608223304224,28.4507755018846,24.5654749770091,19.7740269903929,19.2362864388478,24.0960940637784,27.3121777372438,18.7367560679955,34.9393980586549,21.9943434072939,25.6017283061266,33.7353293672432,27.1917109634306,26.2746063403692,22.9218142648407,25.2964186039691,10.3758419480502,16.8513556773255,12.9728936774714,12.367416181167,10.9544465549792,16.1588697034119,7.89340140522401,15.8232875597946,41.8308885079591,8.51140380883053,21.5652309791032,29.0269939181433,13.7296576170407,22.7320990152401,17.0427542845817,21.7099584613515,43.6017528793187,13.6433816474749,19.7187621494851,18.3324692637203,19.2446003596572,24.7909261013887,28.0891496245496,28.2943789393808,33.8915559828311,36.5416737920479,28.5424035896902,30.3147132224115,21.2402527695052,34.7157740595628,78.4114676484216,80.498041205169,10.3270497333998,22.3508764506833,25.2064426280833,22.3874321391108,27.5410708232815,25.752034574846,23.9786246756355,23.0358859135017,33.175203250851,35.3673820969777,36.0933852013478,35.6676428793929,25.5030742055183,27.7643065015746,42.295792240278,37.5945940213514,30.0912980641529,24.5730533060812,35.6722440984332,44.047022833667,29.2039304347918,17.4802058031587,13.302236506449,17.5402724172985,21.2617362874156,13.8345816574767,24.2922595578128,23.6296924160379,18.8943610543902,24.018793603122,18.9753495434998,14.4389760547462,49.3637428342993,22.5076367539138,31.5635188429921,20.7906923980645,29.4384787846174,32.2847559859748,27.15058839935,74.5939125330768,32.8540391289194,30.2919861335263,27.5660497568702,59.5239373118743,54.0905829431284,32.6896053110605,27.2168944327151,25.4418394604845,20.9866202373493,33.9328302679233,21.7006018613273,26.2111322313293,17.4082855727529,12.4323181623096,17.9069438314543,18.0734756833153,50.483593708175,58.7796099759364,53.0687899408987,21.0027535963325,22.77619153784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| |||
|short_description=p1@Mnt | |||
}} |
Latest revision as of 15:56, 25 September 2015
Short description: | p1@Mnt |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mnt_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_NM_010813, uc011xzb.1_5end |
EntrezGene: | Mnt |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 5.61e-13 | 95 |
ectoderm | 5.61e-13 | 95 |
presumptive ectoderm | 5.61e-13 | 95 |
central nervous system | 6.36e-12 | 73 |
ecto-epithelium | 1.69e-11 | 73 |
pre-chordal neural plate | 2.34e-11 | 49 |
neurectoderm | 3.49e-11 | 64 |
neural plate | 3.49e-11 | 64 |
presumptive neural plate | 3.49e-11 | 64 |
nervous system | 4.64e-11 | 75 |
brain | 2.67e-10 | 47 |
future brain | 2.67e-10 | 47 |
anterior neural tube | 5.67e-10 | 40 |
regional part of brain | 6.03e-10 | 46 |
regional part of forebrain | 7.81e-10 | 39 |
forebrain | 7.81e-10 | 39 |
future forebrain | 7.81e-10 | 39 |
neural tube | 1.22e-09 | 52 |
neural rod | 1.22e-09 | 52 |
future spinal cord | 1.22e-09 | 52 |
neural keel | 1.22e-09 | 52 |
regional part of nervous system | 3.01e-09 | 54 |
brain grey matter | 8.40e-09 | 29 |
regional part of telencephalon | 8.40e-09 | 29 |
telencephalon | 8.40e-09 | 29 |
cerebral cortex | 3.29e-08 | 21 |
cerebral hemisphere | 3.29e-08 | 21 |
pallium | 3.29e-08 | 21 |
gray matter | 5.54e-08 | 34 |
regional part of cerebral cortex | 7.15e-07 | 17 |