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FFCP PHASE1:Mm9::chr7:109415808..109415863,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20866
|EntrezGene=20866
|HGNC=
|HGNC=
|MCL_coexpression_id=0
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=P70302
|UniProt=P70302
|association_with_transcript=-474bp_to_ENSMUST00000033289,NM_009287,uc009irl.1,uc009irm.1_5end
|association_with_transcript=-474bp_to_ENSMUST00000033289,NM_009287,uc009irl.1,uc009irm.1_5end
|cluster_id=chr7:109415808..109415863,+
|description=CAGE_peak_2_at_Stim1_5end
|description=CAGE_peak_2_at_Stim1_5end
|id=chr7:109415808..109415863,+
|id=chr7:109415808..109415863,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007811!9.86e-14!86;UBERON:0000033!2.10e-13!63;UBERON:0000153!2.29e-12!94;UBERON:0001049!7.16e-12!52;UBERON:0005068!7.16e-12!52;UBERON:0006241!7.16e-12!52;UBERON:0007135!7.16e-12!52;UBERON:0000955!5.06e-11!50;UBERON:0006238!5.06e-11!50;UBERON:0001017!5.77e-11!73;UBERON:0005743!5.77e-11!73;UBERON:0002616!1.70e-10!49;UBERON:0004121!6.32e-10!102;UBERON:0000924!6.32e-10!102;UBERON:0006601!6.32e-10!102;UBERON:0000073!7.63e-10!75;UBERON:0001016!7.63e-10!75;UBERON:0002346!1.12e-09!71;UBERON:0003075!1.12e-09!71;UBERON:0007284!1.12e-09!71;UBERON:0003056!2.60e-09!49;UBERON:0002020!2.14e-08!34;UBERON:0003080!1.13e-07!40;UBERON:0002780!3.50e-07!39;UBERON:0001890!3.50e-07!39;UBERON:0006240!3.50e-07!39
|ontology_enrichment_uberon=UBERON:0007811!9.86e-14!86;UBERON:0000033!2.10e-13!63;UBERON:0000153!2.29e-12!94;UBERON:0001049!7.16e-12!52;UBERON:0005068!7.16e-12!52;UBERON:0006241!7.16e-12!52;UBERON:0007135!7.16e-12!52;UBERON:0000955!5.06e-11!50;UBERON:0006238!5.06e-11!50;UBERON:0001017!5.77e-11!73;UBERON:0005743!5.77e-11!73;UBERON:0002616!1.70e-10!49;UBERON:0004121!6.32e-10!102;UBERON:0000924!6.32e-10!102;UBERON:0006601!6.32e-10!102;UBERON:0000073!7.63e-10!75;UBERON:0001016!7.63e-10!75;UBERON:0002346!1.12e-09!71;UBERON:0003075!1.12e-09!71;UBERON:0007284!1.12e-09!71;UBERON:0003056!2.60e-09!49;UBERON:0002020!2.14e-08!34;UBERON:0003080!1.13e-07!40;UBERON:0002780!3.50e-07!39;UBERON:0001890!3.50e-07!39;UBERON:0006240!3.50e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.05e-12,54;UBERON:0002346,1.41e-12,64;UBERON:0003075,1.41e-12,64;UBERON:0007284,1.41e-12,64;UBERON:0004121,3.75e-12,95;UBERON:0000924,3.75e-12,95;UBERON:0006601,3.75e-12,95;UBERON:0001049,4.96e-12,52;UBERON:0005068,4.96e-12,52;UBERON:0006241,4.96e-12,52;UBERON:0007135,4.96e-12,52;UBERON:0010371,5.08e-12,73;UBERON:0001017,5.81e-11,73;UBERON:0000955,4.09e-10,47;UBERON:0006238,4.09e-10,47;UBERON:0001016,7.08e-10,75;UBERON:0002616,1.34e-09,46;UBERON:0003056,1.91e-09,49;UBERON:0002020,1.55e-08,34;UBERON:0003080,8.49e-08,40;UBERON:0002780,2.66e-07,39;UBERON:0001890,2.66e-07,39;UBERON:0006240,2.66e-07,39
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|phase1_expression=2.24208385946712,1.74487703819681,1.36499771816861,1.20985684522732,2.00358291978539,1.17515490338323,0.467225281191051,7.87652272993615,12.3894075493467,7.0219357896598,0.513653904676515,0.638177271962691,7.70403284690426,8.13009742496676,1.66554880907831,2.02475267389826,2.79824751251259,4.41647031501533,5.75880621144103,7.63901373236454,20.9206493771632,3.47518329203099,3.91799683708403,0.95995453676044,0.68822784320151,0.57423196411502,1.29228598847722,0.430942465371778,0.760093677825496,0.252030129759931,1.10865255327652,0.635030673459631,1.84519436275371,0,0.577703239502549,0.332469290716985,0.612508068787107,18.4153917524239,19.533383613095,6.80580867165938,15.2940186888064,16.3930916390027,10.6812277666854,2.89562681343828,2.43304634926835,1.83546752161682,9.38869613217647,3.48840250208714,3.07560655828261,5.63846707315422,3.3596741190087,4.31257693094915,9.2280433331755,11.6057942721815,7.05796978199174,1.54355661621568,2.29226751951005,2.57836046138721,4.85559506063035,7.40587370980846,7.60597684207415,3.04960078862219,0.889294796111139,1.7997994345628,2.96659908770092,2.8419204597844,2.09720077362883,9.60545763303886,1.55534418462716,1.89008313664367,2.10324961351382,9.42648248532552,8.39300455616131,1.71487118900936,1.82106394934649,0,4.40463523997555,9.70423769447427,9.98442466165583,5.14356522147756,5.85520919055422,7.8137005583514,7.81712397203867,11.2552522006336,9.32069311438542,8.83885756421003,7.83044244395066,6.52398060388552,0.302904773332736,1.058001841495,4.92769630792852,2.58127163094416,0,0,0.649776417447669,2.68816132258401,8.14577636764161,0.511290967734173,0.519572009205738,0.35333957451034,4.50698943285378,0,0,7.11066703153331,0,0.760079596425296,0.505524445014783,5.1382745873577,1.55362730188303,1.33597925158342,0.520455980298408,1.82679286987285,1.61430848079241,1.20578112442098,2.82212897125692,1.0053327306374,2.47194967734374,0.722996784599558,3.5384422077995,11.4854463462661,11.0420759230197,3.39412677194655,0,4.9772735491963,5.86450779077674,1.02182822083437,1.67741174308288,1.79970819298022,1.65191295194984,13.7807388252437,8.23501085073528,4.64921102817598,11.298580812498,12.7857728665165,11.0127663616567,10.5456820994042,2.95334155165917,4.72746488318353,2.0217820674694,7.15502310014011,3.12289063110489,3.44853156650209,3.06105620669094,4.82255417074288,6.39543092022482,5.38077625196369,6.09061209638237,8.79591460512653,2.58681591519411,3.40390944302075,2.63926686245923,1.31517439456545,1.11218899690239,5.2237824978325,1.64625709126355,1.79130840136644,1.40442637462647,2.31613116403244,1.42081749697796,0.207125772535502,1.17263029990548,0.180062061461015,1.18372367792605,1.77087808572663,1.85120535464854,0.697601834251224,0.804820204198858,1.40118410840603,1.15191894939436,1.97000956894914,1.13496333364198,1.31579988682799,1.3173006917463,1.74468344388483,5.67782861123144,4.52780294468852,1.32167513193519,0.264450566663544,1.2797295032114,2.32236671860439,1.9330119198314,2.01683524623343,1.33426826306922,0.760902504450237,1.89811624617805,0.164698954724011,1.75934646160189,2.18852119245266,1.36474860983384,0,0.864552199498777,1.59313018603494,1.13800740571849,0.456994050438915,2.25415471346161,1.62921062276251,1.35766741017338,1.33258057791605,1.07502113111237,0.295220295959204,0.627994911365499,1.72756029490521,1.77871576252289,0.83422552858047,1.17935397067922,1.12431056192427,0.608580364165509,0.482354319504834,0.763877555344259,1.15078454980324,2.7562988551756,0.823684239564244,7.18841032636773,2.97712758134803,2.49630138491648,1.01031551178845,1.4351793081753,2.41221760681684,2.21703828199926,2.08440552947533,1.14075483509418,0.848725428875941,0.469380496577004,2.01007508930179,2.61848004974615,3.12213836572478,2.99506773801763,3.10050565508285,2.87018583583477,3.76885623846197,3.10832967358612,2.74833211304872,0,0,1.47529281905711,0.275936746304732,10.5963389391943,9.61135830056066,0.819674726883377,22.2174415939848,1.57754109708128,0.390438744296638,3.01592756825919,1.43381278771531,1.33679204449436,0.849229592366497,0.809621403349789,2.63030272120181,1.97643888973262,12.2102100240287,1.13552068166615,2.49291845134157,2.44330439030364,2.96946221350564,0,0.971122544619926,0.302323556964751,1.13163047853539,0.885905678642318,1.22974059177571,1.80899805217755,1.81766864738753,1.78248689192361,0.316036757935816,0,1.03135543248187,3.06395645178409,1.26042765821917,1.94038025674132,2.57204442037911,4.78818630834139,3.74574516964348,5.59466670047211,6.39376393140658,2.11204537257339,3.1774810629573,1.54369878638473,3.2977250588296,4.19807509409354,3.5584625707612,5.252383136138,4.59594519286172,1.7488850197791,8.34413859047294,3.07567585436135,3.714963623338,2.03713980106683,1.69531611304222,2.32380187125743,1.60144721244566,4.07948231985253,3.63873776041511,2.9021994498929,1.90934123603023,1.58167996790568,1.21991680276109,1.72808545314882,2.09088296014469,1.52853794622324,2.15782954215713,2.56225712748541,1.83229159388821,3.36998930558661,4.34937519160848,94.1367207602598,2.24274819065968,1.65458490457098,1.75006069509643,3.22899558694328,2.53434188236167,2.8165737274981,3.51551839078665,6.92071673209692,64.0197920188916,65.0947814142776,5.05617793005085,1.01362607645082,2.46506297195585,2.33857481360031,3.93858730468459,4.96703386953162,4.44723163223885,3.98761723371358,4.84638959751109,5.18206285253999,4.2346997757473,6.04238860586465,5.00301576529713,6.54510652216786,18.5918914564473,1.10992976687032,0.897138566094757,0.335769232728157,3.28422309854724,1.50145980360946,0.549454872801795,1.50057865355346,2.00628841614145,9.03602948187307,9.66682996665071,10.8850147553485,9.28007184655913,12.3314853558716,9.06472676867641,6.07520250208625,13.9599572999508,8.60970577069989,10.8729665467882,0.726511433089237,1.19707462020309,3.41467211508268,2.18796045361465,1.25767897576789,2.20612210140017,6.66740183404846,7.2112270033613,6.09746498224449,4.54854981174835,7.60437899670719,5.47016390019621,5.99305647807247,6.14641463086745,4.42253110958222,6.66811167796303,6.48952225291191,5.40145817298374,2.47251540481984,4.56316652416632,3.42869252385415,3.72699192934609,5.24559617884106,5.95920308192547,4.98779716201252,4.99226186560891,5.48783918618318,4.73525480588117,5.16055632614275,2.80571135828869,5.81311588808453,5.61475549540712,3.6830793885272,3.87342102964915,5.78719832943424,4.74640098082097,7.48581147025307,7.73535794573874,15.876931561714,9.70602244125868,8.81097775357602
|short_description=p2@Stim1
|short_description=p2@Stim1
}}
}}

Latest revision as of 16:01, 25 September 2015

Short description:p2@Stim1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Stim1_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: -474bp_to_ENSMUST00000033289, NM_009287, uc009irl.1, uc009irm.1_5end
EntrezGene:Stim1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Stim1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.24
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E97.88
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E712.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.02
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.64
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.70
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E88.13
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.02
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.76
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A67.64
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A320.92
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.92
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G818.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H119.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H36.81
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G915.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H216.39
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H410.68
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.43
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B79.39
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.49
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.64
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.36
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A29.23
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I911.61
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.06
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C34.86
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E89.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.39
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.82
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.70
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.98
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.14
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.86
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.81
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.82
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.32
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.84
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.52
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.93
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.15
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.51
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.14
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C12.82
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A82.47
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F511.49
bone (os femoris), neonate N16.CNhs11225.1525-43A611.04
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.98
cerebellum, neonate N30.CNhs11135.1395-42I25.86
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.68
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.65
corpora quadrigemina, adult.CNhs10501.16-22A413.78
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F14.65
cortex, adult.CNhs10473.12-14D511.30
cortex, neonate N30.CNhs11107.1392-42F212.79
diencephalon, adult.CNhs10482.20-12F211.01
diencephalon, neonate N30.CNhs11201.1388-42B210.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.95
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.73
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G47.16
eyeball, embryo E12.CNhs11016.345-16C63.12
eyeball, embryo E14.CNhs10521.399-16E23.45
eyeball, embryo E15.CNhs10593.426-16C93.06
eyeball, embryo E17.CNhs11023.1261-18D44.82
eyeball, neonate N00.CNhs11207.633-15C66.40
eyeball, neonate N01.CNhs11140.1532-43E75.38
eyeball, neonate N02.CNhs11205.1551-44G86.09
eyeball, neonate N16.CNhs11188.777-19A28.80
forelimb, embryo E11.CNhs10596.335-25E22.59
forelimb, embryo E12.CNhs10600.359-14H23.40
forelimb, embryo E13.CNhs10589.384-1E22.64
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C45.22
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.32
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E31.40
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G11.97
heart, neonate N16.CNhs11209.782-15G11.13
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D21.74
hippocampus, adult.CNhs10478.13-16E85.68
hippocampus, neonate N00.CNhs11228.627-43G14.53
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D81.93
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F22.19
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G71.33
kidney, neonate N10.CNhs11206.758-6D51.08
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H11.73
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F42.76
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B92.50
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I62.62
lung, neonate N00.CNhs11224.640-42C63.12
lung, neonate N06.CNhs11212.683-20E53.00
lung, neonate N07.CNhs11111.715-19A33.10
lung, neonate N10.CNhs11219.750-23E62.87
lung, neonate N20.CNhs11109.822-18A43.77
lung, neonate N25.CNhs11119.1359-25C73.11
lung, neonate N30.CNhs11133.1394-42H22.75
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C210.60
medulla oblongata, neonate N30.CNhs11200.1396-42A39.61
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C222.22
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I912.21
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I42.44
oviduct, adult pregnant day01.CNhs10500.988-6G62.97
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C71.94
pituitary gland, embryo E14.CNhs11037.398-44A52.57
pituitary gland, embryo E15.CNhs10592.427-16B94.79
pituitary gland, embryo E16.CNhs11036.449-43F63.75
pituitary gland, embryo E17.CNhs11039.1265-44F55.59
pituitary gland, neonate N00.CNhs11190.1308-22E96.39
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G33.18
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C33.30
skin, neonate N00.CNhs11124.650-25G44.20
skin, neonate N03.CNhs11215.662-22H33.56
skin, neonate N06.CNhs11097.693-20I55.25
skin, neonate N10.CNhs11108.762-6C44.60
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C98.34
spleen, adult.CNhs10465.25-2G23.08
spleen, embryo E16.CNhs11035.461-43C13.71
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D11.70
spleen, neonate N20.CNhs11112.824-19H12.32
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.64
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.90
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D41.73
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A92.56
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I13.37
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G594.14
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C51.65
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I53.23
testis, embryo E18.CNhs11027.503-18G52.53
testis, neonate N00.CNhs11189.1300-22B72.82
testis, neonate N07.CNhs11222.726-26I43.52
testis, neonate N10.CNhs11204.763-44D96.92
testis, neonate N20.CNhs11110.839-18H364.02
testis, neonate N30.CNhs11130.1391-42E265.09
thymus, adult.CNhs10471.38-12B55.06
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I22.47
thymus, embryo E16.CNhs11002.456-26C52.34
thymus, embryo E17.CNhs10581.478-18C13.94
thymus, embryo E18.CNhs10595.1273-19G44.97
thymus, neonate N02.CNhs11181.1541-43F84.45
thymus, neonate N03.CNhs11137.2104-43C73.99
thymus, neonate N06.CNhs11197.681-26C44.85
thymus, neonate N07.CNhs11211.713-19D35.18
thymus, neonate N10.CNhs11194.748-24E44.23
thymus, neonate N20.CNhs11186.820-7A26.04
thymus, neonate N25.CNhs11125.1362-25G75.00
thymus, neonate N30.CNhs11132.1393-42G26.55
tongue, adult.CNhs10499.32-1B418.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E43.28
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.28
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A412.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.96
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.61
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.87
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H23.41
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.60
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.47
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.99
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.49
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.40
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.25
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.96
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.99
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.99
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.16
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.87
whole body, embryo E17.5.CNhs10513.490-9F95.79
whole body, embryo E17.CNhs10517.475-3I54.75
whole body, embryo E18.CNhs10516.493-3B37.49
whole body, neonate N00.CNhs10525.657-19C27.74
whole body, neonate N01.CNhs10576.659-23C615.88
whole body, neonate N06.CNhs10515.692-21D19.71
whole body, neonate N10.CNhs10518.761-6B48.81





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.05e-1254
neurectoderm1.41e-1264
neural plate1.41e-1264
presumptive neural plate1.41e-1264
ectoderm-derived structure3.75e-1295
ectoderm3.75e-1295
presumptive ectoderm3.75e-1295
neural tube4.96e-1252
neural rod4.96e-1252
future spinal cord4.96e-1252
neural keel4.96e-1252
ecto-epithelium5.08e-1273
central nervous system5.81e-1173
brain4.09e-1047
future brain4.09e-1047
nervous system7.08e-1075
regional part of brain1.34e-0946
pre-chordal neural plate1.91e-0949
gray matter1.55e-0834
anterior neural tube8.49e-0840
regional part of forebrain2.66e-0739
forebrain2.66e-0739
future forebrain2.66e-0739
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