FFCP PHASE1:Mm9::chr5:143722027..143722042,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14086 | |EntrezGene=14086 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3512 | |||
|TSSclassifier=NA | |||
|UniProt=Q61553 | |UniProt=Q61553 | ||
|association_with_transcript=0bp_to_NM_007984,uc009ajl.1_5end | |association_with_transcript=0bp_to_NM_007984,uc009ajl.1_5end | ||
|cluster_id=chr5:143722027..143722042,+ | |||
|description=CAGE_peak_1_at_Fscn1_5end | |description=CAGE_peak_1_at_Fscn1_5end | ||
|id=chr5:143722027..143722042,+ | |id=chr5:143722027..143722042,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.65e-21!50;CL:0002319!3.31e-18!43;CL:0000221!1.22e-17!44;CL:0000133!1.22e-17!44;CL:0000393!3.15e-17!39;CL:0000211!3.15e-17!39;CL:0000540!8.55e-14!33;CL:0000047!8.55e-14!33;CL:0000031!8.55e-14!33;CL:0000404!8.55e-14!33;CL:0000117!3.52e-10!23;CL:0000337!3.52e-10!23;CL:0002321!2.83e-09!70;CL:0000220!2.83e-09!70 | |ontology_enrichment_celltype=CL:0000055!3.65e-21!50;CL:0002319!3.31e-18!43;CL:0000221!1.22e-17!44;CL:0000133!1.22e-17!44;CL:0000393!3.15e-17!39;CL:0000211!3.15e-17!39;CL:0000540!8.55e-14!33;CL:0000047!8.55e-14!33;CL:0000031!8.55e-14!33;CL:0000404!8.55e-14!33;CL:0000117!3.52e-10!23;CL:0000337!3.52e-10!23;CL:0002321!2.83e-09!70;CL:0000220!2.83e-09!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.26e-18,43;CL:0000221,1.20e-17,44;CL:0000133,1.20e-17,44;CL:0000393,3.10e-17,39;CL:0000211,3.10e-17,39;CL:0000540,8.45e-14,33;CL:0000047,8.45e-14,33;CL:0000031,8.45e-14,33;CL:0000404,8.45e-14,33;CL:0000117,3.49e-10,23;CL:0000337,3.49e-10,23;CL:0002321,3.17e-09,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.10e-24!73;UBERON:0005743!1.10e-24!73;UBERON:0000073!2.19e-24!75;UBERON:0001016!2.19e-24!75;UBERON:0004121!1.44e-20!102;UBERON:0000924!1.44e-20!102;UBERON:0006601!1.44e-20!102;UBERON:0002346!3.58e-17!71;UBERON:0003075!3.58e-17!71;UBERON:0007284!3.58e-17!71;UBERON:0001049!2.92e-15!52;UBERON:0005068!2.92e-15!52;UBERON:0006241!2.92e-15!52;UBERON:0007135!2.92e-15!52;UBERON:0002020!1.70e-14!34;UBERON:0003056!2.12e-13!49;UBERON:0000033!2.53e-13!63;UBERON:0000955!2.57e-13!50;UBERON:0006238!2.57e-13!50;UBERON:0002616!6.15e-13!49;UBERON:0002780!4.04e-12!39;UBERON:0001890!4.04e-12!39;UBERON:0006240!4.04e-12!39;UBERON:0003080!5.26e-12!40;UBERON:0002791!7.40e-12!29;UBERON:0003528!7.40e-12!29;UBERON:0001893!7.40e-12!29;UBERON:0000956!3.89e-10!21;UBERON:0001869!3.89e-10!21;UBERON:0000203!3.89e-10!21;UBERON:0000153!1.08e-08!94;UBERON:0002619!3.35e-08!17;UBERON:0000468!6.10e-08!333 | |ontology_enrichment_uberon=UBERON:0001017!1.10e-24!73;UBERON:0005743!1.10e-24!73;UBERON:0000073!2.19e-24!75;UBERON:0001016!2.19e-24!75;UBERON:0004121!1.44e-20!102;UBERON:0000924!1.44e-20!102;UBERON:0006601!1.44e-20!102;UBERON:0002346!3.58e-17!71;UBERON:0003075!3.58e-17!71;UBERON:0007284!3.58e-17!71;UBERON:0001049!2.92e-15!52;UBERON:0005068!2.92e-15!52;UBERON:0006241!2.92e-15!52;UBERON:0007135!2.92e-15!52;UBERON:0002020!1.70e-14!34;UBERON:0003056!2.12e-13!49;UBERON:0000033!2.53e-13!63;UBERON:0000955!2.57e-13!50;UBERON:0006238!2.57e-13!50;UBERON:0002616!6.15e-13!49;UBERON:0002780!4.04e-12!39;UBERON:0001890!4.04e-12!39;UBERON:0006240!4.04e-12!39;UBERON:0003080!5.26e-12!40;UBERON:0002791!7.40e-12!29;UBERON:0003528!7.40e-12!29;UBERON:0001893!7.40e-12!29;UBERON:0000956!3.89e-10!21;UBERON:0001869!3.89e-10!21;UBERON:0000203!3.89e-10!21;UBERON:0000153!1.08e-08!94;UBERON:0002619!3.35e-08!17;UBERON:0000468!6.10e-08!333 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.07e-24,73;UBERON:0001016,2.14e-24,75;UBERON:0004121,3.75e-21,95;UBERON:0000924,3.75e-21,95;UBERON:0006601,3.75e-21,95;UBERON:0002346,3.80e-18,64;UBERON:0003075,3.80e-18,64;UBERON:0007284,3.80e-18,64;UBERON:0010314,1.89e-16,92;UBERON:0000073,1.60e-15,54;UBERON:0001049,2.89e-15,52;UBERON:0005068,2.89e-15,52;UBERON:0006241,2.89e-15,52;UBERON:0007135,2.89e-15,52;UBERON:0010371,2.91e-15,73;UBERON:0002020,1.68e-14,34;UBERON:0003056,2.10e-13,49;UBERON:0000955,7.02e-13,47;UBERON:0006238,7.02e-13,47;UBERON:0002616,1.67e-12,46;UBERON:0002780,4.00e-12,39;UBERON:0001890,4.00e-12,39;UBERON:0006240,4.00e-12,39;UBERON:0003080,5.21e-12,40;UBERON:0003528,7.33e-12,29;UBERON:0002791,7.33e-12,29;UBERON:0001893,7.33e-12,29;UBERON:0000956,3.86e-10,21;UBERON:0001869,3.86e-10,21;UBERON:0000203,3.86e-10,21;UBERON:0002619,3.33e-08,17 | |||
|phase1_expression=144.454260088524,1.04692622291808,0,0,0,0,0.467225281191051,1.29123323441576,1.97104211012333,3.97909694747389,0.171217968225505,0.319088635981346,0.684802919724823,0.34968160967599,1.99865857089398,1.82227740650843,0,2.99689057090326,3.56497527374921,1.27316895539409,39.4600866300964,4.36880185283895,1.82839852397255,5.11975752938901,6.65286915094793,0,0,1.29282739611533,0,0,0.221730510655305,0,0,0,0.577703239502549,0,0.408338712524738,0,0,0,0,0,0,708.421394748573,660.369329963918,448.771809035311,287.920014720078,969.121820111085,852.602075192485,521.655419216302,309.369991792051,633.948808849525,0.671130424230945,1.45072428402269,1.00828139742739,454.320164039482,221.776882512598,254.226341492779,443.073049282519,547.505663546554,446.851139471856,553.333120868893,357.496508036678,62.9929802096979,91.9645717187286,85.257613793532,304.693312397218,374.228629383194,363.846849590448,374.641478870442,409.923349673844,394.769660446057,332.848891214082,378.251587975778,371.592891137702,476.155331463991,204.815538658863,149.266498221584,128.722274868732,478.747224460604,408.217865753952,417.772523186521,110.835650603548,83.2888662846886,116.737861301483,330.278644315981,273.923113857474,338.501393618746,106.168123053124,116.304631004343,46.3783181922684,44.7420416030321,2.03991400112325,1.61910957491345,1.94932925234301,0.896053774194671,25.2799956237153,144.013622578459,96.9001797168701,115.895380439392,55.9148376513422,216.871746830197,142.690934235722,127.9920065676,99.5858788651585,107.931302692392,102.621462338001,11.418387971906,172.970506276311,28.3524485613815,210.958157347621,135.487137848903,119.458827578638,77.471437244048,78.5492563666508,80.0496186770033,43.0119243857811,29.0644707409022,16.8076004870476,197.840857485681,68.460870722722,43.1538975290348,9.31958806090611,41.5748731756397,52.7805701169907,5.62005521458901,5.99075622529601,2.39961092397363,4.57452817463033,116.986489375167,183.457741730269,387.7693306203,204.938873506694,288.702751325943,145.659419236252,203.937267676171,168.442307808423,42.5471839486518,5.30717792710717,23.990371571058,252.824020676533,264.617322202927,266.852076371528,165.926004437122,197.169774540548,207.416113141172,215.326563038257,72.1782404361854,511.327279236702,326.207988289488,280.466091917334,252.075092291711,174.057578015224,192.235195920236,120.588331935055,157.436105053428,1.40442637462647,0.257347907114715,0.852490498186778,166.321995346008,131.100067529433,104.075871524467,154.831057072728,94.4468312387538,86.3895832169318,75.806065988633,123.674038045224,85.5889959551352,116.508373738744,103.261334905751,71.7458964480823,77.3397933480008,76.8425403518677,65.0901130987803,117.972661144475,375.29312134725,1.65209391491899,5.02456076660734,179.801995201202,156.063043490215,131.444810548535,76.4380558322468,65.6015229342367,66.5789691393957,21.353807769503,31.6221993070101,35.6895996496383,42.3777285447651,45.2316682116359,26.0657628509724,12.5360068927323,11.5501938487533,250.551297159021,172.172508502861,207.382233638468,118.728724133818,112.686395044391,131.083847375005,82.2707347986587,22.2891323449199,21.351826986427,15.4246454902251,7.70776830426587,58.8963223177812,54.8399596365836,37.1022485435009,34.689080757434,32.8000937263287,21.1339456978578,19.5633373466551,13.1329533687779,16.1991233780968,40.2550978276593,34.2369671855023,27.1472775609668,24.752730038817,15.9663698034502,8.20153986317724,14.2259956428286,225.684271418647,221.469402984713,163.294772515731,105.610611729826,110.72163616904,105.69137655339,69.2724449895186,103.88155996598,102.316686617734,131.390729373769,28.6760800752541,40.0629157928878,23.5777965487864,0,2.17562273527484,40.324670387561,39.7348914678815,133.417540279855,189.648508906185,347.214214307799,62.3603190194801,279.540282402803,235.82500155517,262.816545234015,255.935582607183,269.586395639697,254.768877709949,248.553770828385,245.202664787591,217.012990092641,245.489485746261,116.39086987078,189.995999112961,167.936455093537,53.7802600890466,6.63725691699814,160.963561770753,98.2551560135441,68.463643951391,130.818738546182,79.0108330215894,70.5509240349244,70.5255435186361,70.5864809201748,37.6083741943621,29.5172104009997,23.721174947083,24.8520912200265,176.819994338747,189.769189109301,182.186479776853,120.591358876746,153.218814320179,139.373020449996,125.1350940861,244.293248094322,130.276723581249,7.49796553386871,16.9832840529724,73.1433852932452,90.6503261670182,65.0579274817094,67.9543324944554,28.2736411530955,162.247139259196,11.9609616558497,206.180481095259,76.3001452763212,18.0833718724503,12.8492574057764,19.6749228957609,26.6866135090353,31.489076772823,37.5903928748033,16.2294005062569,249.430930938725,162.655573701479,91.0485023127785,79.6626407815126,59.6129799027065,49.630079469614,56.2870033489538,29.8401773861794,11.276502676386,10.5627683224777,1.69107881605257,146.376698577055,137.826922550762,162.172291078936,139.363449532472,101.880543670939,88.9567868934815,66.66464504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| ||
|short_description=p1@Fscn1 | |short_description=p1@Fscn1 | ||
}} | }} |
Latest revision as of 16:48, 25 September 2015
Short description: | p1@Fscn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fscn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3512 |
Association with transcript: | 0bp_to_NM_007984, uc009ajl.1_5end |
EntrezGene: | Fscn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.26e-18 | 43 |
ectodermal cell | 1.20e-17 | 44 |
neurectodermal cell | 1.20e-17 | 44 |
electrically responsive cell | 3.10e-17 | 39 |
electrically active cell | 3.10e-17 | 39 |
neuron | 8.45e-14 | 33 |
neuronal stem cell | 8.45e-14 | 33 |
neuroblast | 8.45e-14 | 33 |
electrically signaling cell | 8.45e-14 | 33 |
CNS neuron (sensu Vertebrata) | 3.49e-10 | 23 |
neuroblast (sensu Vertebrata) | 3.49e-10 | 23 |
embryonic cell | 3.17e-09 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.07e-24 | 73 |
nervous system | 2.14e-24 | 75 |
ectoderm-derived structure | 3.75e-21 | 95 |
ectoderm | 3.75e-21 | 95 |
presumptive ectoderm | 3.75e-21 | 95 |
neurectoderm | 3.80e-18 | 64 |
neural plate | 3.80e-18 | 64 |
presumptive neural plate | 3.80e-18 | 64 |
structure with developmental contribution from neural crest | 1.89e-16 | 92 |
regional part of nervous system | 1.60e-15 | 54 |
neural tube | 2.89e-15 | 52 |
neural rod | 2.89e-15 | 52 |
future spinal cord | 2.89e-15 | 52 |
neural keel | 2.89e-15 | 52 |
ecto-epithelium | 2.91e-15 | 73 |
gray matter | 1.68e-14 | 34 |
pre-chordal neural plate | 2.10e-13 | 49 |
brain | 7.02e-13 | 47 |
future brain | 7.02e-13 | 47 |
regional part of brain | 1.67e-12 | 46 |
regional part of forebrain | 4.00e-12 | 39 |
forebrain | 4.00e-12 | 39 |
future forebrain | 4.00e-12 | 39 |
anterior neural tube | 5.21e-12 | 40 |
brain grey matter | 7.33e-12 | 29 |
regional part of telencephalon | 7.33e-12 | 29 |
telencephalon | 7.33e-12 | 29 |
cerebral cortex | 3.86e-10 | 21 |
cerebral hemisphere | 3.86e-10 | 21 |
pallium | 3.86e-10 | 21 |
regional part of cerebral cortex | 3.33e-08 | 17 |