FFCP PHASE1:Mm9::chr10:127496152..127496209,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100043508,100048119,56351 | |EntrezGene=100043508,100048119,56351 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z7C6 | |UniProt=D3Z7C6 | ||
|association_with_transcript=85bp_to_ENSMUST00000084771_5end | |association_with_transcript=85bp_to_ENSMUST00000084771_5end | ||
|cluster_id=chr10:127496152..127496209,+ | |||
|description=CAGE_peak_2_at_Gm9769_5end,CAGE_peak_2_at_LOC100048119_5end,CAGE_peak_2_at_Ptges3_5end | |description=CAGE_peak_2_at_Gm9769_5end,CAGE_peak_2_at_LOC100048119_5end,CAGE_peak_2_at_Ptges3_5end | ||
|id=chr10:127496152..127496209,+ | |id=chr10:127496152..127496209,+ | ||
|ontology_enrichment_celltype=CL:0000540!2.95e-15!33;CL:0000047!2.95e-15!33;CL:0000031!2.95e-15!33;CL:0000404!2.95e-15!33;CL:0000393!1.08e-14!39;CL:0000211!1.08e-14!39;CL:0000117!1.89e-11!23;CL:0000337!1.89e-11!23;CL:0002321!1.31e-09!70;CL:0000220!1.31e-09!70;CL:0002319!8.53e-09!43;CL:0000221!1.03e-08!44;CL:0000133!1.03e-08!44;CL:0000055!2.83e-08!50 | |ontology_enrichment_celltype=CL:0000540!2.95e-15!33;CL:0000047!2.95e-15!33;CL:0000031!2.95e-15!33;CL:0000404!2.95e-15!33;CL:0000393!1.08e-14!39;CL:0000211!1.08e-14!39;CL:0000117!1.89e-11!23;CL:0000337!1.89e-11!23;CL:0002321!1.31e-09!70;CL:0000220!1.31e-09!70;CL:0002319!8.53e-09!43;CL:0000221!1.03e-08!44;CL:0000133!1.03e-08!44;CL:0000055!2.83e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.95e-15,33;CL:0000047,2.95e-15,33;CL:0000031,2.95e-15,33;CL:0000404,2.95e-15,33;CL:0000393,1.08e-14,39;CL:0000211,1.08e-14,39;CL:0000117,1.89e-11,23;CL:0000337,1.89e-11,23;CL:0002321,1.31e-09,70;CL:0002319,8.53e-09,43;CL:0000221,1.03e-08,44;CL:0000133,1.03e-08,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!9.59e-13!34;UBERON:0000073!3.39e-12!75;UBERON:0001016!3.39e-12!75;UBERON:0001017!9.02e-12!73;UBERON:0005743!9.02e-12!73;UBERON:0002791!3.25e-10!29;UBERON:0003528!3.25e-10!29;UBERON:0001893!3.25e-10!29;UBERON:0001049!3.77e-08!52;UBERON:0005068!3.77e-08!52;UBERON:0006241!3.77e-08!52;UBERON:0007135!3.77e-08!52;UBERON:0002346!6.69e-08!71;UBERON:0003075!6.69e-08!71;UBERON:0007284!6.69e-08!71;UBERON:0004121!8.75e-08!102;UBERON:0000924!8.75e-08!102;UBERON:0006601!8.75e-08!102;UBERON:0003080!1.25e-07!40;UBERON:0002780!2.00e-07!39;UBERON:0001890!2.00e-07!39;UBERON:0006240!2.00e-07!39;UBERON:0000956!2.02e-07!21;UBERON:0001869!2.02e-07!21;UBERON:0000203!2.02e-07!21;UBERON:0003056!2.48e-07!49;UBERON:0000955!3.13e-07!50;UBERON:0006238!3.13e-07!50;UBERON:0002616!3.63e-07!49 | |ontology_enrichment_uberon=UBERON:0002020!9.59e-13!34;UBERON:0000073!3.39e-12!75;UBERON:0001016!3.39e-12!75;UBERON:0001017!9.02e-12!73;UBERON:0005743!9.02e-12!73;UBERON:0002791!3.25e-10!29;UBERON:0003528!3.25e-10!29;UBERON:0001893!3.25e-10!29;UBERON:0001049!3.77e-08!52;UBERON:0005068!3.77e-08!52;UBERON:0006241!3.77e-08!52;UBERON:0007135!3.77e-08!52;UBERON:0002346!6.69e-08!71;UBERON:0003075!6.69e-08!71;UBERON:0007284!6.69e-08!71;UBERON:0004121!8.75e-08!102;UBERON:0000924!8.75e-08!102;UBERON:0006601!8.75e-08!102;UBERON:0003080!1.25e-07!40;UBERON:0002780!2.00e-07!39;UBERON:0001890!2.00e-07!39;UBERON:0006240!2.00e-07!39;UBERON:0000956!2.02e-07!21;UBERON:0001869!2.02e-07!21;UBERON:0000203!2.02e-07!21;UBERON:0003056!2.48e-07!49;UBERON:0000955!3.13e-07!50;UBERON:0006238!3.13e-07!50;UBERON:0002616!3.63e-07!49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,9.59e-13,34;UBERON:0001016,3.39e-12,75;UBERON:0001017,9.02e-12,73;UBERON:0003528,3.25e-10,29;UBERON:0002791,3.25e-10,29;UBERON:0001893,3.25e-10,29;UBERON:0002346,2.59e-09,64;UBERON:0003075,2.59e-09,64;UBERON:0007284,2.59e-09,64;UBERON:0000073,3.08e-09,54;UBERON:0004121,8.15e-09,95;UBERON:0000924,8.15e-09,95;UBERON:0006601,8.15e-09,95;UBERON:0001049,3.77e-08,52;UBERON:0005068,3.77e-08,52;UBERON:0006241,3.77e-08,52;UBERON:0007135,3.77e-08,52;UBERON:0003080,1.25e-07,40;UBERON:0010371,1.41e-07,73;UBERON:0002780,2.00e-07,39;UBERON:0001890,2.00e-07,39;UBERON:0006240,2.00e-07,39;UBERON:0000956,2.02e-07,21;UBERON:0001869,2.02e-07,21;UBERON:0000203,2.02e-07,21;UBERON:0003056,2.48e-07,49 | |||
|phase1_expression=52.849119544582,25.126229350034,24.1149596876454,12.0985684522732,16.0286633582831,44.3201277847389,54.8989705399485,4.00282302668886,39.9839970910734,31.5987110534691,42.9757100246018,55.8405112967355,4.79362043807376,4.28359971853087,87.2747575957036,64.3871350299647,102.835596084838,6.30924330716475,5.48457734422955,9.76096199135469,95.5036148396514,39.0213438219479,62.1655498150666,47.6777419924352,40.1466241867548,29.860062133981,40.9223896351121,42.663304071806,52.8265106088719,52.6742971198255,72.2841464736293,78.1087728355346,63.9667379087953,31.6963362030877,72.5017565575699,88.2705966853594,80.4427263673734,11.7188856606334,20.3147189576188,19.3703785270305,3.52938892818609,7.5135003345429,8.73918635456076,70.87990852025,68.6321824356114,45.519594536097,17.2126095756569,35.7561256463932,24.1654801007919,34.997381833371,32.8968090819602,28.7505128729943,3.6912173332702,8.70434570413613,7.39406358113421,59.4269297243038,47.2780175898949,44.34779993586,98.5281164386241,79.877637870077,81.7642510522971,28.8017852258762,22.2323699027785,16.1981949110652,16.8107281636386,18.4724829885986,26.9640099466564,20.7477884873639,88.2398600745145,75.4683195274151,111.05157959353,82.2674835082954,86.3595995120809,94.4404061947296,73.801012684042,79.9720344350718,101.306610519438,77.2508395415386,80.3362168930153,93.7711505761678,76.3006947644097,96.3689735530006,72.0292137423563,78.7867654044352,75.635132649521,102.82537633031,87.8433270530465,107.366080795373,67.3205858732006,60.4572480854284,26.087803983151,23.2314446784974,66.6371907033596,50.7321000139548,46.7839020562322,53.3151995645829,33.8471052517522,76.8640754827041,99.2382537582959,91.1616102236678,49.5768837613915,110.360770576313,145.238986632788,184.877342819866,90.0602730606651,97.543548207913,95.544120107794,42.2480354960522,12.1700805314171,29.5399856739001,53.2599953172037,44.4519598335726,43.355713484139,41.4487261519712,31.3961848052332,50.2666365318702,23.2363269670311,33.4024514484996,41.5766959416441,53.5448273325924,44.8308282474599,38.3051449976825,20.5030937339934,41.2820923786281,40.2137677081834,42.1504141094176,105.916570063234,97.184242420932,101.529111431379,64.4099749440738,56.2725741466911,88.963281295908,64.14117415095,58.3031242713154,59.2195926994746,60.5159911242736,56.1134894815243,35.8292075357068,37.1502454897502,30.5140691035387,70.6554005287481,65.0622955546728,56.179384499269,58.0213548667503,54.8374183159703,57.5230604078976,52.7540709271273,31.0444044886819,78.4667494275546,73.3731591051139,59.8233822157426,58.5252605581625,52.8289773528636,48.058798980059,52.0628805112097,44.5836757673425,83.5633692902749,90.5864633043797,97.1839167932927,57.5809647648695,55.3481501555387,62.8416594498942,51.3736076219906,48.0104725463665,60.0099069131901,57.2033504086003,61.1663355191132,47.4067290010708,51.8363527227463,35.6243397051637,28.2930145315037,25.8773977742838,29.6392655642918,27.1096965895951,57.829735855135,74.8116531997398,25.7726650727362,47.0722008661109,71.8781404303738,74.0834983234799,58.7635623628746,64.740411404093,49.5903037774061,52.8827240592914,51.7236677083518,48.7508905983072,40.2136334080431,38.5975555759833,40.3575660336579,39.5480539807857,43.2276099749388,36.6419942788036,52.9173443659098,62.8366819353509,50.7184810528862,56.411417813152,48.2941693047388,51.6900992591648,34.0844935099747,32.3266224075329,32.9697328466887,32.8236456031989,47.1359677068567,63.7348303835479,72.5302691967719,71.2812896259986,53.9607922893418,58.8472269795897,44.304898209967,42.57902834272,33.7241271692074,49.1464929606666,43.1304619582064,28.6548529704748,29.9556166189978,50.0106178335281,38.0322516666454,33.7710464954357,20.8771104888263,81.6707984730789,78.8750485979405,71.292936025579,65.7132695207806,40.033995528594,30.2315423925237,40.5877987544222,37.6747994413796,30.7835918611797,33.8044109553873,23.2685906896348,22.7944176062982,21.4080606700637,36.1899081454253,40.7929262864032,31.4729134732183,32.8364728102632,52.8211441059836,56.4960329374419,70.8198964027238,20.955086957963,99.0695808967046,99.9523185399394,94.3554482069659,85.0728920711085,66.1712062024711,90.3014133216375,75.2947905115303,75.9865230569411,81.0339944790373,55.5885877409726,31.7945790866522,32.9421366784422,50.4949573996086,37.283247791793,35.84118735179,62.8801847641402,61.6740056208092,60.5422306016433,32.483208216885,33.5104311258881,38.7642439752332,42.5334463488681,45.6316644332443,41.4008152895919,39.0048851727495,33.0033738394198,37.7887962386705,65.7222993214282,37.2553009294333,43.2960810763816,40.6109135040806,47.2677366645487,37.8462747384878,26.4884505729701,27.9259332595815,20.5477108737906,26.0223509704855,29.0199805177005,43.1110019278068,60.8557412525093,41.0640863370789,42.1842112344807,36.7265854153612,55.8130159051634,39.471173464304,49.120074575247,49.446938807713,52.1780625902994,46.2026489697065,31.3426097292936,64.2518465376773,69.555871804858,60.9461884477509,39.1414953386197,66.1142226584573,54.6929366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| |phase1_expression=52.849119544582,25.126229350034,24.1149596876454,12.0985684522732,16.0286633582831,44.3201277847389,54.8989705399485,4.00282302668886,39.9839970910734,31.5987110534691,42.9757100246018,55.8405112967355,4.79362043807376,4.28359971853087,87.2747575957036,64.3871350299647,102.835596084838,6.30924330716475,5.48457734422955,9.76096199135469,95.5036148396514,39.0213438219479,62.1655498150666,47.6777419924352,40.1466241867548,29.860062133981,40.9223896351121,42.663304071806,52.8265106088719,52.6742971198255,72.2841464736293,78.1087728355346,63.9667379087953,31.6963362030877,72.5017565575699,88.2705966853594,80.4427263673734,11.7188856606334,20.3147189576188,19.3703785270305,3.52938892818609,7.5135003345429,8.73918635456076,70.87990852025,68.6321824356114,45.519594536097,17.2126095756569,35.7561256463932,24.1654801007919,34.997381833371,32.8968090819602,28.7505128729943,3.6912173332702,8.70434570413613,7.39406358113421,59.4269297243038,47.2780175898949,44.34779993586,98.5281164386241,79.877637870077,81.7642510522971,28.8017852258762,22.2323699027785,16.1981949110652,16.8107281636386,18.4724829885986,26.9640099466564,20.7477884873639,88.2398600745145,75.4683195274151,111.05157959353,82.2674835082954,86.3595995120809,94.4404061947296,73.801012684042,79.9720344350718,101.306610519438,77.2508395415386,80.3362168930153,93.7711505761678,76.3006947644097,96.3689735530006,72.0292137423563,78.7867654044352,75.635132649521,102.82537633031,87.8433270530465,107.366080795373,67.3205858732006,60.4572480854284,26.087803983151,23.2314446784974,66.6371907033596,50.7321000139548,46.7839020562322,53.3151995645829,33.8471052517522,76.8640754827041,99.2382537582959,91.1616102236678,49.5768837613915,110.360770576313,145.238986632788,184.877342819866,90.0602730606651,97.543548207913,95.544120107794,42.2480354960522,12.1700805314171,29.5399856739001,53.2599953172037,44.4519598335726,43.355713484139,41.4487261519712,31.3961848052332,50.2666365318702,23.2363269670311,33.4024514484996,41.5766959416441,53.5448273325924,44.8308282474599,38.3051449976825,20.5030937339934,41.2820923786281,40.2137677081834,42.1504141094176,105.916570063234,97.184242420932,101.529111431379,64.4099749440738,56.2725741466911,88.963281295908,64.14117415095,58.3031242713154,59.2195926994746,60.5159911242736,56.1134894815243,35.8292075357068,37.1502454897502,30.5140691035387,70.6554005287481,65.0622955546728,56.179384499269,58.0213548667503,54.8374183159703,57.5230604078976,52.7540709271273,31.0444044886819,78.4667494275546,73.3731591051139,59.8233822157426,58.5252605581625,52.8289773528636,48.058798980059,52.0628805112097,44.5836757673425,83.5633692902749,90.5864633043797,97.1839167932927,57.5809647648695,55.3481501555387,62.8416594498942,51.3736076219906,48.0104725463665,60.0099069131901,57.2033504086003,61.1663355191132,47.4067290010708,51.8363527227463,35.6243397051637,28.2930145315037,25.8773977742838,29.6392655642918,27.1096965895951,57.829735855135,74.8116531997398,25.7726650727362,47.0722008661109,71.8781404303738,74.0834983234799,58.7635623628746,64.740411404093,49.5903037774061,52.8827240592914,51.7236677083518,48.7508905983072,40.2136334080431,38.5975555759833,40.3575660336579,39.5480539807857,43.2276099749388,36.6419942788036,52.9173443659098,62.8366819353509,50.7184810528862,56.411417813152,48.2941693047388,51.6900992591648,34.0844935099747,32.3266224075329,32.9697328466887,32.8236456031989,47.1359677068567,63.7348303835479,72.5302691967719,71.2812896259986,53.9607922893418,58.8472269795897,44.304898209967,42.57902834272,33.7241271692074,49.1464929606666,43.1304619582064,28.6548529704748,29.9556166189978,50.0106178335281,38.0322516666454,33.7710464954357,20.8771104888263,81.6707984730789,78.8750485979405,71.292936025579,65.7132695207806,40.033995528594,30.2315423925237,40.5877987544222,37.6747994413796,30.7835918611797,33.8044109553873,23.2685906896348,22.7944176062982,21.4080606700637,36.1899081454253,40.7929262864032,31.4729134732183,32.8364728102632,52.8211441059836,56.4960329374419,70.8198964027238,20.955086957963,99.0695808967046,99.9523185399394,94.3554482069659,85.0728920711085,66.1712062024711,90.3014133216375,75.2947905115303,75.9865230569411,81.0339944790373,55.5885877409726,31.7945790866522,32.9421366784422,50.4949573996086,37.283247791793,35.84118735179,62.8801847641402,61.6740056208092,60.5422306016433,32.483208216885,33.5104311258881,38.7642439752332,42.5334463488681,45.6316644332443,41.4008152895919,39.0048851727495,33.0033738394198,37.7887962386705,65.7222993214282,37.2553009294333,43.2960810763816,40.6109135040806,47.2677366645487,37.8462747384878,26.4884505729701,27.9259332595815,20.5477108737906,26.0223509704855,29.0199805177005,43.1110019278068,60.8557412525093,41.0640863370789,42.1842112344807,36.7265854153612,55.8130159051634,39.471173464304,49.120074575247,49.446938807713,52.1780625902994,46.2026489697065,31.3426097292936,64.2518465376773,69.555871804858,60.9461884477509,39.1414953386197,66.1142226584573,54.6929366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| ||
|short_description=p2@Gm9769,p2@LOC100048119,p2@Ptges3 | |short_description=p2@Gm9769,p2@LOC100048119,p2@Ptges3 | ||
}} | }} |
Latest revision as of 18:27, 25 September 2015
Short description: | p2@Gm9769, p2@LOC100048119, p2@Ptges3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gm9769_5end, CAGE_peak_2_at_LOC100048119_5end, CAGE_peak_2_at_Ptges3_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 85bp_to_ENSMUST00000084771_5end |
EntrezGene: | 100043508,100048119,56351 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.95e-15 | 33 |
neuronal stem cell | 2.95e-15 | 33 |
neuroblast | 2.95e-15 | 33 |
electrically signaling cell | 2.95e-15 | 33 |
electrically responsive cell | 1.08e-14 | 39 |
electrically active cell | 1.08e-14 | 39 |
CNS neuron (sensu Vertebrata) | 1.89e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.89e-11 | 23 |
embryonic cell | 1.31e-09 | 70 |
neural cell | 8.53e-09 | 43 |
ectodermal cell | 1.03e-08 | 44 |
neurectodermal cell | 1.03e-08 | 44 |
Ontology term | p-value | n |
---|---|---|
gray matter | 9.59e-13 | 34 |
nervous system | 3.39e-12 | 75 |
central nervous system | 9.02e-12 | 73 |
brain grey matter | 3.25e-10 | 29 |
regional part of telencephalon | 3.25e-10 | 29 |
telencephalon | 3.25e-10 | 29 |
neurectoderm | 2.59e-09 | 64 |
neural plate | 2.59e-09 | 64 |
presumptive neural plate | 2.59e-09 | 64 |
regional part of nervous system | 3.08e-09 | 54 |
ectoderm-derived structure | 8.15e-09 | 95 |
ectoderm | 8.15e-09 | 95 |
presumptive ectoderm | 8.15e-09 | 95 |
neural tube | 3.77e-08 | 52 |
neural rod | 3.77e-08 | 52 |
future spinal cord | 3.77e-08 | 52 |
neural keel | 3.77e-08 | 52 |
anterior neural tube | 1.25e-07 | 40 |
ecto-epithelium | 1.41e-07 | 73 |
regional part of forebrain | 2.00e-07 | 39 |
forebrain | 2.00e-07 | 39 |
future forebrain | 2.00e-07 | 39 |
cerebral cortex | 2.02e-07 | 21 |
cerebral hemisphere | 2.02e-07 | 21 |
pallium | 2.02e-07 | 21 |
pre-chordal neural plate | 2.48e-07 | 49 |