FFCP PHASE1:Mm9::chr19:4192120..4192125,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19045 | |EntrezGene=19045 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=P62137 | |UniProt=P62137 | ||
|association_with_transcript=-32bp_to_ENSMUST00000046094_5end | |association_with_transcript=-32bp_to_ENSMUST00000046094_5end | ||
|cluster_id=chr19:4192120..4192125,+ | |||
|description=CAGE_peak_2_at_Ppp1ca_5end | |description=CAGE_peak_2_at_Ppp1ca_5end | ||
|id=chr19:4192120..4192125,+ | |id=chr19:4192120..4192125,+ | ||
|ontology_enrichment_celltype=CL:0000117!8.36e-11!23;CL:0000337!8.36e-11!23;CL:0002319!2.48e-08!43;CL:0000221!4.07e-08!44;CL:0000133!4.07e-08!44;CL:0002321!5.42e-07!70;CL:0000220!5.42e-07!70 | |ontology_enrichment_celltype=CL:0000117!8.36e-11!23;CL:0000337!8.36e-11!23;CL:0002319!2.48e-08!43;CL:0000221!4.07e-08!44;CL:0000133!4.07e-08!44;CL:0002321!5.42e-07!70;CL:0000220!5.42e-07!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.78e-11,23;CL:0000337,5.78e-11,23;CL:0002319,1.11e-08,43;CL:0000221,1.86e-08,44;CL:0000133,1.86e-08,44;CL:0002321,1.04e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!3.36e-16!34;UBERON:0001049!2.37e-15!52;UBERON:0005068!2.37e-15!52;UBERON:0006241!2.37e-15!52;UBERON:0007135!2.37e-15!52;UBERON:0000073!1.31e-14!75;UBERON:0001016!1.31e-14!75;UBERON:0001017!4.74e-14!73;UBERON:0005743!4.74e-14!73;UBERON:0000955!7.89e-14!50;UBERON:0006238!7.89e-14!50;UBERON:0002791!1.07e-13!29;UBERON:0003528!1.07e-13!29;UBERON:0001893!1.07e-13!29;UBERON:0002616!2.04e-13!49;UBERON:0002780!3.58e-13!39;UBERON:0001890!3.58e-13!39;UBERON:0006240!3.58e-13!39;UBERON:0003080!4.35e-13!40;UBERON:0002346!7.77e-11!71;UBERON:0003075!7.77e-11!71;UBERON:0007284!7.77e-11!71;UBERON:0003056!2.06e-10!49;UBERON:0000033!6.44e-10!63;UBERON:0004121!8.27e-10!102;UBERON:0000924!8.27e-10!102;UBERON:0006601!8.27e-10!102;UBERON:0000956!2.03e-09!21;UBERON:0001869!2.03e-09!21;UBERON:0000203!2.03e-09!21;UBERON:0002619!5.73e-08!17;UBERON:0007811!6.91e-07!86 | |ontology_enrichment_uberon=UBERON:0002020!3.36e-16!34;UBERON:0001049!2.37e-15!52;UBERON:0005068!2.37e-15!52;UBERON:0006241!2.37e-15!52;UBERON:0007135!2.37e-15!52;UBERON:0000073!1.31e-14!75;UBERON:0001016!1.31e-14!75;UBERON:0001017!4.74e-14!73;UBERON:0005743!4.74e-14!73;UBERON:0000955!7.89e-14!50;UBERON:0006238!7.89e-14!50;UBERON:0002791!1.07e-13!29;UBERON:0003528!1.07e-13!29;UBERON:0001893!1.07e-13!29;UBERON:0002616!2.04e-13!49;UBERON:0002780!3.58e-13!39;UBERON:0001890!3.58e-13!39;UBERON:0006240!3.58e-13!39;UBERON:0003080!4.35e-13!40;UBERON:0002346!7.77e-11!71;UBERON:0003075!7.77e-11!71;UBERON:0007284!7.77e-11!71;UBERON:0003056!2.06e-10!49;UBERON:0000033!6.44e-10!63;UBERON:0004121!8.27e-10!102;UBERON:0000924!8.27e-10!102;UBERON:0006601!8.27e-10!102;UBERON:0000956!2.03e-09!21;UBERON:0001869!2.03e-09!21;UBERON:0000203!2.03e-09!21;UBERON:0002619!5.73e-08!17;UBERON:0007811!6.91e-07!86 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.87e-16,34;UBERON:0000073,3.05e-16,54;UBERON:0001049,1.01e-15,52;UBERON:0005068,1.01e-15,52;UBERON:0006241,1.01e-15,52;UBERON:0007135,1.01e-15,52;UBERON:0001016,3.37e-15,75;UBERON:0001017,1.26e-14,73;UBERON:0003528,6.55e-14,29;UBERON:0002791,6.55e-14,29;UBERON:0001893,6.55e-14,29;UBERON:0000955,1.09e-13,47;UBERON:0006238,1.09e-13,47;UBERON:0002780,2.25e-13,39;UBERON:0001890,2.25e-13,39;UBERON:0006240,2.25e-13,39;UBERON:0003080,2.74e-13,40;UBERON:0002616,2.86e-13,46;UBERON:0002346,3.69e-11,64;UBERON:0003075,3.69e-11,64;UBERON:0007284,3.69e-11,64;UBERON:0003056,1.24e-10,49;UBERON:0004121,3.47e-10,95;UBERON:0000924,3.47e-10,95;UBERON:0006601,3.47e-10,95;UBERON:0010314,4.43e-10,92;UBERON:0000956,1.48e-09,21;UBERON:0001869,1.48e-09,21;UBERON:0000203,1.48e-09,21;UBERON:0010371,4.93e-09,73;UBERON:0002619,4.43e-08,17 | |||
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|phase1_expression=2.24208385946712,2.09385244583617,2.27499619694768,1.51232105653415,1.50268718983904,2.68606835059024,1.86890112476421,1.16210991097419,0.422366166455,0.468129052643987,0.68487187290202,0.8774937489487,1.36960583944965,1.04904482902797,0.999329285446988,1.61980213911861,5.59649502502517,1.73504190947031,1.7824876368746,1.27316895539409,1.78590909317247,1.58865521921416,1.56719873483361,1.43993180514066,0.91763712426868,2.8711598205751,1.29228598847722,4.09395342103189,2.66032787238923,3.2763916868791,2.43903561720835,0.635030673459631,1.23012957516914,0,2.02196133825892,2.99222361645286,2.24586291888606,1.25559489221072,3.1253413780952,4.18818995179039,4.70585190424811,4.78131839470912,3.39857247121808,1.38486499773135,1.11514624341466,1.10128051297009,2.34717403304412,4.36050312760893,5.27246838562732,3.88859798148567,4.4795654920116,7.18762821824858,1.67782606057736,0.725362142011344,1.34437519656986,1.54355661621568,1.71920063963254,2.06268836910977,3.84401275633236,5.81890077199236,4.43681982454325,3.72728985276045,1.77858959222228,4.94944844504769,0,3.5524005747305,2.69640099466564,7.30014780110954,2.48855069540346,3.37514845829227,3.15487442027073,4.57041575046086,4.8591079009355,2.69479758272899,3.73797336971122,4.5960939330501,1.10115880999389,5.36286819957788,3.22573719838111,2.63772575460388,4.84884511092771,4.16730696445408,4.18774498502071,5.06486349028512,2.90316670775939,3.53554302568401,2.56269025438385,3.91438836233131,2.34751199332871,2.72057616384428,1.44932244350839,0,0,0,0,2.68816132258401,1.68533304158102,2.89731548382698,4.1565760736459,3.18005617059306,1.40843419776681,3.84979432242953,2.54805239706646,0,2.38140145112336,2.78695852022608,2.02209778005913,0.91347103775248,0.517875767294343,1.7813056687779,2.94925055502431,1.21786191324856,2.53677046981664,3.01445281105245,1.29347577849275,1.25666591329675,1.73036477414062,0.86759614151947,0.884610551949874,2.10296904931632,1.32504911076236,2.42437626567611,1.86391761218122,0.292780797011547,1.25668024088073,1.27728527604296,0.599075622529601,0,1.52484272487678,1.79748767285787,10.980014467647,5.52879149296603,3.65031072403781,4.60287823194595,3.53239675751252,4.05603157669394,1.32391173005411,1.36847667671102,3.28539585963777,1.89397670297827,2.08192708740326,0.459804208866946,1.62055916824814,2.41127708537144,0.816437989815934,1.5373646434182,1.59292931751539,0.517406741478031,1.5089759505299,0.189106080167819,2.11141348996739,1.97276159184817,1.39023624612799,2.78601733217733,0.823128545631774,1.39323986772945,2.80885274925294,1.80143534980301,1.42081749697796,1.65700618028402,1.40715635988658,1.62055855314913,0.946978942340841,1.18058539048442,2.77680803197281,2.55787339225449,1.87791380979733,2.33530684734339,0.493679549740441,1.80584210487005,2.1888578577381,1.90059983652932,1.3173006917463,1.74468344388483,3.15434922846191,2.16099685996497,0.991256348951394,1.05780226665418,1.91959425481711,2.09013004674395,1.28867461322093,1.21010114774006,0.444756087689741,0.380451252225118,1.89811624617805,1.31759163779209,0.754005626400808,0.795825888164603,1.55971269695296,0.898819408654221,2.16138049874694,0.796565093017469,2.46568271239006,1.94222471436539,0,3.46207257337034,0.969762435838129,0.561086559122548,0.948548056863859,1.32849133181642,1.41298855057237,1.23397163921801,0.889357881261447,2.16898637430922,0.786235980452812,3.14806957338795,1.01430060694251,0.964708639009667,2.03700681425136,0.863088412352432,0.486405680325106,1.92192989231657,0,1.86070473834252,0.936113019343682,1.51547326768267,1.07638448113147,0.964887042726734,0.369506380333209,2.65287976478679,1.14075483509418,1.18821560042632,2.34690248288502,0.837531287209079,1.19021820443007,0.780534591431195,0.157635144106191,1.55025282754142,0.478364305972461,0.983179888294428,1.55416483679306,1.3018415272336,1.50791283939272,1.63171705145613,0.491764273019036,0.551873492609465,3.05046120976805,2.46144541843627,0.983609672260053,2.52470927204373,0.94652465824877,0,0.430846795465598,0.477937595905104,1.11399337041197,0.849229592366497,1.21443210502468,0,1.18586333383957,3.21321316421807,1.56134093729095,1.78065603667255,1.30309567482861,1.31976098378028,0,1.69946445308487,1.51161778482376,2.26326095707078,2.06711325016541,0.922305443831782,0.775284879504663,1.09060118843252,0,0.316036757935816,5.27093042874994,0,1.36175842301515,1.8006109403131,1.81102157295856,3.64372959553707,1.41872186913819,2.31879462882692,1.48094118541909,1.2178597964584,1.64270195644597,1.90648863777438,0.882113592219848,0.8244312647074,1.29171541356724,1.5078231232039,1.79058516004705,1.64140899745061,0.874442509889552,1.8542530201051,1.53783792718067,0,0.740778109478847,1.88368457004691,1.50363650493128,1.14389086603261,0.509935289981566,0.839708713941948,0.414599921413271,2.86401185404534,1.10717597753397,1.62655573701479,1.29606408986162,1.04544148007234,1.09181281873089,0.809186078308924,1.1571483801547,2.6175594198403,1.94422459937689,0,1.12738587736838,1.34564891439581,2.3164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| ||
|short_description=p2@Ppp1ca | |short_description=p2@Ppp1ca | ||
}} | }} |
Latest revision as of 18:47, 25 September 2015
Short description: | p2@Ppp1ca |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ppp1ca_5end |
Coexpression cluster: | NA |
Association with transcript: | -32bp_to_ENSMUST00000046094_5end |
EntrezGene: | Ppp1ca |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.78e-11 | 23 |
neuroblast (sensu Vertebrata) | 5.78e-11 | 23 |
neural cell | 1.11e-08 | 43 |
ectodermal cell | 1.86e-08 | 44 |
neurectodermal cell | 1.86e-08 | 44 |
embryonic cell | 1.04e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
gray matter | 1.87e-16 | 34 |
regional part of nervous system | 3.05e-16 | 54 |
neural tube | 1.01e-15 | 52 |
neural rod | 1.01e-15 | 52 |
future spinal cord | 1.01e-15 | 52 |
neural keel | 1.01e-15 | 52 |
nervous system | 3.37e-15 | 75 |
central nervous system | 1.26e-14 | 73 |
brain grey matter | 6.55e-14 | 29 |
regional part of telencephalon | 6.55e-14 | 29 |
telencephalon | 6.55e-14 | 29 |
brain | 1.09e-13 | 47 |
future brain | 1.09e-13 | 47 |
regional part of forebrain | 2.25e-13 | 39 |
forebrain | 2.25e-13 | 39 |
future forebrain | 2.25e-13 | 39 |
anterior neural tube | 2.74e-13 | 40 |
regional part of brain | 2.86e-13 | 46 |
neurectoderm | 3.69e-11 | 64 |
neural plate | 3.69e-11 | 64 |
presumptive neural plate | 3.69e-11 | 64 |
pre-chordal neural plate | 1.24e-10 | 49 |
ectoderm-derived structure | 3.47e-10 | 95 |
ectoderm | 3.47e-10 | 95 |
presumptive ectoderm | 3.47e-10 | 95 |
structure with developmental contribution from neural crest | 4.43e-10 | 92 |
cerebral cortex | 1.48e-09 | 21 |
cerebral hemisphere | 1.48e-09 | 21 |
pallium | 1.48e-09 | 21 |
ecto-epithelium | 4.93e-09 | 73 |
regional part of cerebral cortex | 4.43e-08 | 17 |