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FFCP PHASE1:Mm9::chr7:133415958..133415969,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=104175
|EntrezGene=104175
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=Q8QZX0
|UniProt=Q8QZX0
|association_with_transcript=-163bp_to_ENSMUST00000056028,NM_145587,uc009jqw.1_5end
|association_with_transcript=-163bp_to_ENSMUST00000056028,NM_145587,uc009jqw.1_5end
|cluster_id=chr7:133415958..133415969,+
|description=CAGE_peak_6_at_Sbk1_5end
|description=CAGE_peak_6_at_Sbk1_5end
|id=chr7:133415958..133415969,+
|id=chr7:133415958..133415969,+
|ontology_enrichment_celltype=CL:0000117!7.66e-14!23;CL:0000337!7.66e-14!23;CL:0000540!3.85e-13!33;CL:0000047!3.85e-13!33;CL:0000031!3.85e-13!33;CL:0000404!3.85e-13!33;CL:0000221!2.70e-10!44;CL:0000133!2.70e-10!44;CL:0002319!2.75e-10!43;CL:0000393!3.87e-09!39;CL:0000211!3.87e-09!39;CL:0000055!6.77e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.15e-18,23;CL:0000337,1.15e-18,23;CL:0000540,3.42e-15,33;CL:0000047,3.42e-15,33;CL:0000031,3.42e-15,33;CL:0000404,3.42e-15,33;CL:0002319,2.12e-11,43;CL:0000393,3.27e-11,39;CL:0000211,3.27e-11,39;CL:0000221,6.82e-11,44;CL:0000133,6.82e-11,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!9.20e-17!73;UBERON:0005743!9.20e-17!73;UBERON:0000073!3.93e-16!75;UBERON:0001016!3.93e-16!75;UBERON:0002346!4.28e-16!71;UBERON:0003075!4.28e-16!71;UBERON:0007284!4.28e-16!71;UBERON:0004121!1.09e-15!102;UBERON:0000924!1.09e-15!102;UBERON:0006601!1.09e-15!102;UBERON:0000033!1.27e-13!63;UBERON:0001049!5.34e-13!52;UBERON:0005068!5.34e-13!52;UBERON:0006241!5.34e-13!52;UBERON:0007135!5.34e-13!52;UBERON:0003056!9.91e-13!49;UBERON:0002020!7.74e-12!34;UBERON:0000955!2.59e-11!50;UBERON:0006238!2.59e-11!50;UBERON:0002616!5.02e-11!49;UBERON:0002780!2.98e-09!39;UBERON:0001890!2.98e-09!39;UBERON:0006240!2.98e-09!39;UBERON:0003080!3.42e-09!40;UBERON:0002791!6.72e-09!29;UBERON:0003528!6.72e-09!29;UBERON:0001893!6.72e-09!29;UBERON:0000153!2.11e-08!94;UBERON:0007811!7.89e-08!86
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.51e-20,64;UBERON:0003075,3.51e-20,64;UBERON:0007284,3.51e-20,64;UBERON:0001017,2.24e-19,73;UBERON:0001016,2.44e-18,75;UBERON:0004121,8.97e-18,95;UBERON:0000924,8.97e-18,95;UBERON:0006601,8.97e-18,95;UBERON:0000073,6.59e-17,54;UBERON:0002020,9.79e-16,34;UBERON:0001049,1.04e-15,52;UBERON:0005068,1.04e-15,52;UBERON:0006241,1.04e-15,52;UBERON:0007135,1.04e-15,52;UBERON:0003056,1.82e-15,49;UBERON:0010371,1.82e-15,73;UBERON:0000955,4.22e-12,47;UBERON:0006238,4.22e-12,47;UBERON:0002780,8.09e-12,39;UBERON:0001890,8.09e-12,39;UBERON:0006240,8.09e-12,39;UBERON:0002616,1.01e-11,46;UBERON:0003528,1.17e-11,29;UBERON:0002791,1.17e-11,29;UBERON:0001893,1.17e-11,29;UBERON:0010314,1.65e-11,92;UBERON:0003080,2.93e-11,40;UBERON:0000956,4.77e-07,21;UBERON:0001869,4.77e-07,21;UBERON:0000203,4.77e-07,21
|phase1_expression=0.640595388419176,0,0,0.90739263392049,0.500895729946347,0,0,0.516493293766305,0.140788722151667,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,1.26184866143295,0.411343300817216,0.84877930359606,0.850432901510698,0.397163804803541,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0.251793635951155,0,0,0,0.872100625521786,0.439372365468944,0.388859798148567,0.279972843250725,0,0.838913030288682,0,0.672187598284928,0.257259436035947,0.573066879877513,0,8.09265843438391,7.40587370980846,9.50747105259269,0.677689064138264,0,0,1.97773272513395,0.7104801149461,2.09720077362883,3.07374644257244,4.35496371695606,7.1553147315796,6.30974884054146,5.99867067247988,5.52171352379034,4.65465037016825,5.75072826109418,8.27296907949019,1.10115880999389,1.78762273319263,1.99688493233117,9.89147157976454,11.2529801630964,8.85552729946492,2.51264699101243,1.12552522006336,1.06958773443767,8.2496003932627,5.97961059356232,8.57437450796383,0.454357159999104,0.302286240427142,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0.845060518660083,0,0,0,0,0,0,0.34255163915718,1.03575153458869,0.445326417194474,0.520455980298408,0.608930956624282,0.461230994512117,0.60289056221049,1.05829836422134,1.13099932196708,0,0.722996784599558,0.884610551949874,0.323533699894818,0.662524555381181,0.969750506270444,0,10.2473278954042,12.9856958224342,0,0.11981512450592,0,0,0.748953197024114,1.37250180845588,6.65968066198181,1.56441888173049,1.79000820131231,1.0389402227978,1.62241263067758,1.52759045775474,0.373220911830279,0.252722758433675,0.841767423545896,1.95180664444056,1.60931473103431,1.80062129805349,1.80845781402858,3.46986145671772,3.07472928683639,3.09215691047105,1.55222022443409,1.07783996466421,1.13463648100692,1.23165786914764,0.43839146485515,0.278047249225598,1.0447564995665,0.823128545631774,1.59227413454795,0,0,0.284163499395593,1.03562886267751,0.703578179943289,1.2604344302271,0.946978942340841,0.787056926989615,1.07986979021165,0.930135779001631,0.804820204198858,0.350296027101508,0.658239399653922,0.32833492815819,0.0810688095458557,0.438599962275997,0.439100230582101,0.402619256281115,1.26173969138476,7.20332286654991,0,0.528901133327089,1.06644125267617,0.696710015581316,0.644337306610467,0.605050573870028,0,0.570676878337677,0,0.658795818896044,0.502670417600539,0.397912944082302,0,0.898819408654221,0.216138049874694,0.199141273254367,1.13800740571849,0.571242563048644,1.1270773567308,0.203651327845314,0.581857461502877,1.26244475802573,0.569128834118316,0.885660887877613,0.156998727841375,0.370191491765402,0,0,0,0,0,0,0,0.287696137450811,0.324270453550071,0.274561413188081,0,0,0,0,0.538192240565737,0,0.184753190166605,1.51593129416388,0.814824882210129,0.848725428875941,0.234690248288502,0.335012514883631,0.714130922658041,0.780534591431195,1.10344600874334,0.8858587585951,0.478364305972461,0.491589944147214,1.20879487306127,0.578596234326046,0,0,0,0.275936746304732,0.80275294993896,1.64096361229084,0.327869890753351,0.757412781613119,0.315508219416257,1.17131623288992,1.07711698866399,0.716906393857656,0.668396022247182,0.849229592366497,1.21443210502468,1.75353514746787,1.18586333383957,1.28528526568723,0,1.78065603667255,2.76907830901079,0.824850614862677,0,0.728341908464944,0.604647113929502,0.565815239267694,1.47650946440386,1.22974059177571,0.258428293168221,0.363533729477506,0.712994756769443,0,0,1.03135543248187,0,1.44048875225048,1.94038025674132,0.857348140126369,1.59606210278046,1.78368817602071,0.329098041204242,0.304464949114599,0,0,0,0.49465875882444,0.161464426695906,0.301564624640779,0.835606408021955,0.328281799490123,0.291480836629851,1.11255181206306,0.683483523191411,1.23832120777933,1.11116716421827,0,0.27338845544205,0,0.169978429993855,0.279902904647316,0.138199973804424,0,1.42351197111511,0,0.540026704109006,0.836353184057875,0.436725127492355,0.539457385539283,0.247960367176008,0,0.129614973291793,0,0,1.79419855252775,0.827292452285488,1.16670713006429,2.0665571756437,1.520605129417,1.05621514781179,1.17183946359555,0.734015410979976,0,0.288030006257865,0.316011120628178,0.608175645870493,0.410843828659309,0.25984164595559,0.716106782669926,0.596044064343795,0.480781798079875,0.295379054349154,0.504832249740738,0.838274873204998,0.806609481094724,0.487289403698762,0.865906574762965,1.16876902181569,0.226730383615211,0,0,0.335769232728157,0,0.187682475451182,0.549454872801795,0.214368379079066,0,0,1.38097570952153,1.71868654031819,0.859265911718438,1.37016503954128,2.2661816921691,1.35004500046361,2.70192721934532,0,1.03552062350364,3.21740777510948,2.39414924040619,2.21953687480374,1.21553358534147,3.98265008993166,1.83843508450014,0.888986911206461,1.85431551515005,2.56735367673452,1.01078884705519,1.01391719956096,1.13175804831646,1.03005658216871,1.08842759088278,1.49332219284595,1.42888107384922,1.27472758539341,1.73618298417335,2.06042950401653,1.61918812147837,0.685738504770831,1.06485483695602,0.715308569841963,1.0174249164263,1.12931256498397,1.69229215783353,0.182927972872773,0.789209134313529,1.22223702461276,0.561142271657738,1.77952527186261,1.18205378850676,2.04615521584845,1.85924209423159,1.73615949883027,2.99772693525535,1.40358965067245,0.859484216193193,0.956441660344217,0.882365676478062,0
|phase1_expression=0.640595388419176,0,0,0.90739263392049,0.500895729946347,0,0,0.516493293766305,0.140788722151667,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,1.26184866143295,0.411343300817216,0.84877930359606,0.850432901510698,0.397163804803541,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0.251793635951155,0,0,0,0.872100625521786,0.439372365468944,0.388859798148567,0.279972843250725,0,0.838913030288682,0,0.672187598284928,0.257259436035947,0.573066879877513,0,8.09265843438391,7.40587370980846,9.50747105259269,0.677689064138264,0,0,1.97773272513395,0.7104801149461,2.09720077362883,3.07374644257244,4.35496371695606,7.1553147315796,6.30974884054146,5.99867067247988,5.52171352379034,4.65465037016825,5.75072826109418,8.27296907949019,1.10115880999389,1.78762273319263,1.99688493233117,9.89147157976454,11.2529801630964,8.85552729946492,2.51264699101243,1.12552522006336,1.06958773443767,8.2496003932627,5.97961059356232,8.57437450796383,0.454357159999104,0.302286240427142,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0.845060518660083,0,0,0,0,0,0,0.34255163915718,1.03575153458869,0.445326417194474,0.520455980298408,0.608930956624282,0.461230994512117,0.60289056221049,1.05829836422134,1.13099932196708,0,0.722996784599558,0.884610551949874,0.323533699894818,0.662524555381181,0.969750506270444,0,10.2473278954042,12.9856958224342,0,0.11981512450592,0,0,0.748953197024114,1.37250180845588,6.65968066198181,1.56441888173049,1.79000820131231,1.0389402227978,1.62241263067758,1.52759045775474,0.373220911830279,0.252722758433675,0.841767423545896,1.95180664444056,1.60931473103431,1.80062129805349,1.80845781402858,3.46986145671772,3.07472928683639,3.09215691047105,1.55222022443409,1.07783996466421,1.13463648100692,1.23165786914764,0.43839146485515,0.278047249225598,1.0447564995665,0.823128545631774,1.59227413454795,0,0,0.284163499395593,1.03562886267751,0.703578179943289,1.2604344302271,0.946978942340841,0.787056926989615,1.07986979021165,0.930135779001631,0.804820204198858,0.350296027101508,0.658239399653922,0.32833492815819,0.0810688095458557,0.438599962275997,0.439100230582101,0.402619256281115,1.26173969138476,7.20332286654991,0,0.528901133327089,1.06644125267617,0.696710015581316,0.644337306610467,0.605050573870028,0,0.570676878337677,0,0.658795818896044,0.502670417600539,0.397912944082302,0,0.898819408654221,0.216138049874694,0.199141273254367,1.13800740571849,0.571242563048644,1.1270773567308,0.203651327845314,0.581857461502877,1.26244475802573,0.569128834118316,0.885660887877613,0.156998727841375,0.370191491765402,0,0,0,0,0,0,0,0.287696137450811,0.324270453550071,0.274561413188081,0,0,0,0,0.538192240565737,0,0.184753190166605,1.51593129416388,0.814824882210129,0.848725428875941,0.234690248288502,0.335012514883631,0.714130922658041,0.780534591431195,1.10344600874334,0.8858587585951,0.478364305972461,0.491589944147214,1.20879487306127,0.578596234326046,0,0,0,0.275936746304732,0.80275294993896,1.64096361229084,0.327869890753351,0.757412781613119,0.315508219416257,1.17131623288992,1.07711698866399,0.716906393857656,0.668396022247182,0.849229592366497,1.21443210502468,1.75353514746787,1.18586333383957,1.28528526568723,0,1.78065603667255,2.76907830901079,0.824850614862677,0,0.728341908464944,0.604647113929502,0.565815239267694,1.47650946440386,1.22974059177571,0.258428293168221,0.363533729477506,0.712994756769443,0,0,1.03135543248187,0,1.44048875225048,1.94038025674132,0.857348140126369,1.59606210278046,1.78368817602071,0.329098041204242,0.304464949114599,0,0,0,0.49465875882444,0.161464426695906,0.301564624640779,0.835606408021955,0.328281799490123,0.291480836629851,1.11255181206306,0.683483523191411,1.23832120777933,1.11116716421827,0,0.27338845544205,0,0.169978429993855,0.279902904647316,0.138199973804424,0,1.42351197111511,0,0.540026704109006,0.836353184057875,0.436725127492355,0.539457385539283,0.247960367176008,0,0.129614973291793,0,0,1.79419855252775,0.827292452285488,1.16670713006429,2.0665571756437,1.520605129417,1.05621514781179,1.17183946359555,0.734015410979976,0,0.288030006257865,0.316011120628178,0.608175645870493,0.410843828659309,0.25984164595559,0.716106782669926,0.596044064343795,0.480781798079875,0.295379054349154,0.504832249740738,0.838274873204998,0.806609481094724,0.487289403698762,0.865906574762965,1.16876902181569,0.226730383615211,0,0,0.335769232728157,0,0.187682475451182,0.549454872801795,0.214368379079066,0,0,1.38097570952153,1.71868654031819,0.859265911718438,1.37016503954128,2.2661816921691,1.35004500046361,2.70192721934532,0,1.03552062350364,3.21740777510948,2.39414924040619,2.21953687480374,1.21553358534147,3.98265008993166,1.83843508450014,0.888986911206461,1.85431551515005,2.56735367673452,1.01078884705519,1.01391719956096,1.13175804831646,1.03005658216871,1.08842759088278,1.49332219284595,1.42888107384922,1.27472758539341,1.73618298417335,2.06042950401653,1.61918812147837,0.685738504770831,1.06485483695602,0.715308569841963,1.0174249164263,1.1293125649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|short_description=p6@Sbk1
|short_description=p6@Sbk1
}}
}}

Latest revision as of 20:40, 25 September 2015

Short description:p6@Sbk1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Sbk1_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: -163bp_to_ENSMUST00000056028, NM_145587, uc009jqw.1_5end
EntrezGene:Sbk1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Sbk1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C38.09
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.52
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.65
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.75
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.89
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.25
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.86
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.25
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.57
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B210.25
cerebellum, neonate N30.CNhs11135.1395-42I212.99
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F16.66
cortex, adult.CNhs10473.12-14D51.56
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.53
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C61.95
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C63.47
eyeball, neonate N01.CNhs11140.1532-43E73.07
eyeball, neonate N02.CNhs11205.1551-44G83.09
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G17.20
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G71.26
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A31.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I42.77
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C71.94
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.79
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I52.07
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.84
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G21.17
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I83.22
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B13.98
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.15e-1823
neuroblast (sensu Vertebrata)1.15e-1823
neuron3.42e-1533
neuronal stem cell3.42e-1533
neuroblast3.42e-1533
electrically signaling cell3.42e-1533
neural cell2.12e-1143
electrically responsive cell3.27e-1139
electrically active cell3.27e-1139
ectodermal cell6.82e-1144
neurectodermal cell6.82e-1144

Uber anatomy
Ontology termp-valuen
neurectoderm3.51e-2064
neural plate3.51e-2064
presumptive neural plate3.51e-2064
central nervous system2.24e-1973
nervous system2.44e-1875
ectoderm-derived structure8.97e-1895
ectoderm8.97e-1895
presumptive ectoderm8.97e-1895
regional part of nervous system6.59e-1754
gray matter9.79e-1634
neural tube1.04e-1552
neural rod1.04e-1552
future spinal cord1.04e-1552
neural keel1.04e-1552
pre-chordal neural plate1.82e-1549
ecto-epithelium1.82e-1573
brain4.22e-1247
future brain4.22e-1247
regional part of forebrain8.09e-1239
forebrain8.09e-1239
future forebrain8.09e-1239
regional part of brain1.01e-1146
brain grey matter1.17e-1129
regional part of telencephalon1.17e-1129
telencephalon1.17e-1129
structure with developmental contribution from neural crest1.65e-1192
anterior neural tube2.93e-1140
cerebral cortex4.77e-0721
cerebral hemisphere4.77e-0721
pallium4.77e-0721
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