FFCP PHASE1:Mm9::chr7:133415989..133416006,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=104175 | |EntrezGene=104175 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |MCL_coexpression_id=22 | ||
|TSSclassifier=NA | |||
|UniProt=Q8QZX0 | |UniProt=Q8QZX0 | ||
|association_with_transcript=-126bp_to_ENSMUST00000056028,NM_145587,uc009jqw.1_5end | |association_with_transcript=-126bp_to_ENSMUST00000056028,NM_145587,uc009jqw.1_5end | ||
|cluster_id=chr7:133415989..133416006,+ | |||
|description=CAGE_peak_3_at_Sbk1_5end | |description=CAGE_peak_3_at_Sbk1_5end | ||
|id=chr7:133415989..133416006,+ | |id=chr7:133415989..133416006,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.11e-14!33;CL:0000047!1.11e-14!33;CL:0000031!1.11e-14!33;CL:0000404!1.11e-14!33;CL:0000117!2.76e-14!23;CL:0000337!2.76e-14!23;CL:0002319!1.01e-11!43;CL:0000221!1.57e-11!44;CL:0000133!1.57e-11!44;CL:0000393!2.50e-10!39;CL:0000211!2.50e-10!39;CL:0000055!1.17e-08!50 | |ontology_enrichment_celltype=CL:0000540!1.11e-14!33;CL:0000047!1.11e-14!33;CL:0000031!1.11e-14!33;CL:0000404!1.11e-14!33;CL:0000117!2.76e-14!23;CL:0000337!2.76e-14!23;CL:0002319!1.01e-11!43;CL:0000221!1.57e-11!44;CL:0000133!1.57e-11!44;CL:0000393!2.50e-10!39;CL:0000211!2.50e-10!39;CL:0000055!1.17e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.94e-16,33;CL:0000047,8.94e-16,33;CL:0000031,8.94e-16,33;CL:0000404,8.94e-16,33;CL:0000117,2.39e-15,23;CL:0000337,2.39e-15,23;CL:0002319,5.34e-12,43;CL:0000221,8.37e-12,44;CL:0000133,8.37e-12,44;CL:0000393,1.13e-10,39;CL:0000211,1.13e-10,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.71e-22!73;UBERON:0005743!6.71e-22!73;UBERON:0000073!1.02e-20!75;UBERON:0001016!1.02e-20!75;UBERON:0002346!1.31e-19!71;UBERON:0003075!1.31e-19!71;UBERON:0007284!1.31e-19!71;UBERON:0004121!1.52e-19!102;UBERON:0000924!1.52e-19!102;UBERON:0006601!1.52e-19!102;UBERON:0000033!6.33e-17!63;UBERON:0001049!1.45e-16!52;UBERON:0005068!1.45e-16!52;UBERON:0006241!1.45e-16!52;UBERON:0007135!1.45e-16!52;UBERON:0003056!1.10e-15!49;UBERON:0000955!5.51e-15!50;UBERON:0006238!5.51e-15!50;UBERON:0002616!1.64e-14!49;UBERON:0002020!5.16e-14!34;UBERON:0003080!1.76e-12!40;UBERON:0002780!2.29e-12!39;UBERON:0001890!2.29e-12!39;UBERON:0006240!2.29e-12!39;UBERON:0000153!4.44e-12!94;UBERON:0007811!2.59e-11!86;UBERON:0002791!4.90e-11!29;UBERON:0003528!4.90e-11!29;UBERON:0001893!4.90e-11!29;UBERON:0000468!3.67e-07!333;UBERON:0000956!6.32e-07!21;UBERON:0001869!6.32e-07!21;UBERON:0000203!6.32e-07!21 | |ontology_enrichment_uberon=UBERON:0001017!6.71e-22!73;UBERON:0005743!6.71e-22!73;UBERON:0000073!1.02e-20!75;UBERON:0001016!1.02e-20!75;UBERON:0002346!1.31e-19!71;UBERON:0003075!1.31e-19!71;UBERON:0007284!1.31e-19!71;UBERON:0004121!1.52e-19!102;UBERON:0000924!1.52e-19!102;UBERON:0006601!1.52e-19!102;UBERON:0000033!6.33e-17!63;UBERON:0001049!1.45e-16!52;UBERON:0005068!1.45e-16!52;UBERON:0006241!1.45e-16!52;UBERON:0007135!1.45e-16!52;UBERON:0003056!1.10e-15!49;UBERON:0000955!5.51e-15!50;UBERON:0006238!5.51e-15!50;UBERON:0002616!1.64e-14!49;UBERON:0002020!5.16e-14!34;UBERON:0003080!1.76e-12!40;UBERON:0002780!2.29e-12!39;UBERON:0001890!2.29e-12!39;UBERON:0006240!2.29e-12!39;UBERON:0000153!4.44e-12!94;UBERON:0007811!2.59e-11!86;UBERON:0002791!4.90e-11!29;UBERON:0003528!4.90e-11!29;UBERON:0001893!4.90e-11!29;UBERON:0000468!3.67e-07!333;UBERON:0000956!6.32e-07!21;UBERON:0001869!6.32e-07!21;UBERON:0000203!6.32e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.48e-23,73;UBERON:0002346,4.81e-22,64;UBERON:0003075,4.81e-22,64;UBERON:0007284,4.81e-22,64;UBERON:0001016,5.45e-22,75;UBERON:0004121,2.80e-19,95;UBERON:0000924,2.80e-19,95;UBERON:0006601,2.80e-19,95;UBERON:0000073,4.31e-19,54;UBERON:0001049,4.79e-18,52;UBERON:0005068,4.79e-18,52;UBERON:0006241,4.79e-18,52;UBERON:0007135,4.79e-18,52;UBERON:0003056,7.16e-17,49;UBERON:0010371,1.38e-16,73;UBERON:0000955,2.32e-15,47;UBERON:0006238,2.32e-15,47;UBERON:0002020,5.73e-15,34;UBERON:0002616,7.47e-15,46;UBERON:0003080,1.31e-13,40;UBERON:0002780,1.74e-13,39;UBERON:0001890,1.74e-13,39;UBERON:0006240,1.74e-13,39;UBERON:0010314,1.11e-12,92;UBERON:0003528,9.53e-12,29;UBERON:0002791,9.53e-12,29;UBERON:0001893,9.53e-12,29;UBERON:0000956,2.64e-07,21;UBERON:0001869,2.64e-07,21;UBERON:0000203,2.64e-07,21 | |||
|phase1_expression=1.60148847104794,0,0,1.51232105653415,2.00358291978539,0,0.467225281191051,0.645616617207881,0.563154888606667,0.936258105287974,0.171217968225505,0.239316476986009,0.513602189793617,0.961624426608971,0,1.21485160433896,0.699561878128147,6.62470547252299,5.62169177783529,2.97072756258621,2.63634199468316,0.397163804803541,0,0.159992422793407,0.45881856213434,0,0,0.646413698057667,0.380046838912748,0,0,0,0.61506478758457,0,0,0.498703936075477,0.204169356262369,0,0,0,0,0.683045484958446,0,0.251793635951155,0.405507724878058,0.550640256485045,1.56478268869608,2.61630187656536,0.439372365468944,0.388859798148567,0.699932108126813,2.87505128729943,4.69791296961662,1.45072428402269,2.01656279485478,0.257259436035947,0.573066879877513,0.515672092277442,57.862507805845,48.667170093027,39.9313784208893,0.338844532069132,0,0,0.988866362566974,0.7104801149461,2.99600110518405,5.76327457982332,35.2544681848824,43.0668943278093,34.4932936616267,21.1381728458815,16.3442720304194,27.9279022210095,31.9165418490727,34.9303138911808,3.30347642998166,4.08599481872601,5.22262213071228,54.2052642571097,45.0119206523855,46.8822033501084,8.93385596804419,5.06486349028512,5.80633341551878,23.8649154233671,20.0744069926735,40.4486797440902,0.37863096666592,0.755715601067855,0.289864488701678,2.58127163094416,0,0,0.649776417447669,0.896053774194671,0.842666520790511,0.170430322578058,0,0.35333957451034,1.40843419776681,0,0,0,0.216491041011214,0,0.505524445014783,1.25602267690966,0.776813650941515,0.445326417194474,2.77576522825817,1.21786191324856,1.84492397804847,2.11011696773672,2.23418543557839,2.38766523526383,0.494389935468748,0.86759614151947,0.884610551949874,1.45590164952668,1.10420759230197,0.484875253135222,0,29.8636412951778,41.889341362691,0.255457055208591,0.239630249011841,0,0.127070227073065,2.99581278809645,5.03250663100489,24.5025986620086,3.65031072403781,5.11430914660661,3.94797284663164,2.92034273521964,2.24046600470696,1.11966273549084,1.26361379216837,0.631325567659422,5.46505860443356,9.88579049063934,10.4436035287103,7.08312643827861,13.6753363294169,10.3772113430728,13.9615569593996,2.84573707812917,8.40715172438085,3.9712276835242,5.63043597324636,3.06874025398605,1.94633074457919,0.696504333044333,1.64625709126355,3.98068533636986,0,0,0.852490498186778,0.621377317606506,0.938104239924385,1.08037236876609,1.89395788468168,2.16440654922144,1.3884040159864,1.86027155800326,0.536546802799238,1.5179494507732,0.987359099480883,0,0.405344047729279,0.146199987425332,0.219550115291051,0.268412837520744,4.83666881697493,31.6946206128196,0.660837565967596,0,3.41261200856374,3.94802342162745,2.06187938115349,0.80673409849337,0.667134131534611,0.380451252225118,0,0.494096864172033,0.251335208800269,0,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,3.79335801906163,2.28497025219458,2.25415471346161,3.25842124552503,1.93952487167626,1.8936671370386,1.20149420536089,1.03327103585722,0.156998727841375,0.863780147452604,1.1858105083486,0.500535317148282,0.393117990226406,0,0.405720242777006,0.241177159752417,0.25462585178142,0.863088412352432,0.972811360650212,1.37280706594041,0,1.86070473834252,0.936113019343682,0.505157755894224,1.07638448113147,1.4473305640901,0.554259570499814,3.03186258832776,2.11854469374634,2.03694102930226,1.40814148973101,1.84256883185997,2.14239276797412,1.17080188714679,1.26108115284953,1.99318220683897,1.2756381492599,0.81931657357869,0.518054945597687,0,0,0,0.491764273019036,0.551873492609465,2.56880943980467,2.46144541843627,0.819674726883377,0.757412781613119,3.78609863299508,2.34263246577983,3.23135096599198,1.67278158566786,2.22798674082394,5.66153061577665,2.83367491172426,4.67609372658099,4.74345333535828,5.78378369559253,1.13552068166615,1.95872164033981,4.72372182125371,1.64970122972535,0,2.42780636154981,2.11626489875326,1.13163047853539,1.77181135728464,0,0.516856586336442,0.727067458955011,0,0,0,0,0,5.40183282093931,4.78627129996192,4.28674070063185,4.61084607469911,3.92411398724555,3.9491764944509,3.95804433848979,0.469343416127421,0,0.220528398054962,0.98931751764888,0.484393280087717,0.904693873922338,0.835606408021955,0.820704498725306,1.1659233465194,2.03967832211561,0.683483523191411,2.88941615148511,1.11116716421827,0.376736914009382,1.36694227721025,0.457556346413045,0.339956859987711,0.139951452323658,0.276399947608848,0,4.4287039101359,1.01659733563424,1.83609079397062,0.627264888043406,0.87345025498471,0.809186078308924,0.330613822901344,0.523511883968059,0.518459893167171,1.24267862617385,1.12738587736838,4.78452947340732,4.79829622325583,6.22243802700952,4.90807329215378,3.8859908862879,5.28107573905893,2.99470085141085,3.04092098834561,1.44950472495604,0.288030006257865,1.89606672376907,2.02725215290164,1.74608627180206,0.77952493786677,1.25318686967237,1.58945083825012,1.68273629327956,1.77227432609493,1.71642964911851,2.81965184623499,1.51239277705261,1.36441033035653,2.30908419936791,2.10378423926824,0.226730383615211,0,0.089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| ||
|short_description=p3@Sbk1 | |short_description=p3@Sbk1 | ||
}} | }} |
Latest revision as of 20:40, 25 September 2015
Short description: | p3@Sbk1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Sbk1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -126bp_to_ENSMUST00000056028, NM_145587, uc009jqw.1_5end |
EntrezGene: | Sbk1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.94e-16 | 33 |
neuronal stem cell | 8.94e-16 | 33 |
neuroblast | 8.94e-16 | 33 |
electrically signaling cell | 8.94e-16 | 33 |
CNS neuron (sensu Vertebrata) | 2.39e-15 | 23 |
neuroblast (sensu Vertebrata) | 2.39e-15 | 23 |
neural cell | 5.34e-12 | 43 |
ectodermal cell | 8.37e-12 | 44 |
neurectodermal cell | 8.37e-12 | 44 |
electrically responsive cell | 1.13e-10 | 39 |
electrically active cell | 1.13e-10 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.48e-23 | 73 |
neurectoderm | 4.81e-22 | 64 |
neural plate | 4.81e-22 | 64 |
presumptive neural plate | 4.81e-22 | 64 |
nervous system | 5.45e-22 | 75 |
ectoderm-derived structure | 2.80e-19 | 95 |
ectoderm | 2.80e-19 | 95 |
presumptive ectoderm | 2.80e-19 | 95 |
regional part of nervous system | 4.31e-19 | 54 |
neural tube | 4.79e-18 | 52 |
neural rod | 4.79e-18 | 52 |
future spinal cord | 4.79e-18 | 52 |
neural keel | 4.79e-18 | 52 |
pre-chordal neural plate | 7.16e-17 | 49 |
ecto-epithelium | 1.38e-16 | 73 |
brain | 2.32e-15 | 47 |
future brain | 2.32e-15 | 47 |
gray matter | 5.73e-15 | 34 |
regional part of brain | 7.47e-15 | 46 |
anterior neural tube | 1.31e-13 | 40 |
regional part of forebrain | 1.74e-13 | 39 |
forebrain | 1.74e-13 | 39 |
future forebrain | 1.74e-13 | 39 |
structure with developmental contribution from neural crest | 1.11e-12 | 92 |
brain grey matter | 9.53e-12 | 29 |
regional part of telencephalon | 9.53e-12 | 29 |
telencephalon | 9.53e-12 | 29 |
cerebral cortex | 2.64e-07 | 21 |
cerebral hemisphere | 2.64e-07 | 21 |
pallium | 2.64e-07 | 21 |