FFCP PHASE1:Mm9::chr14:45839419..45839450,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70713 | |EntrezGene=70713 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=25bp_to_ENSMUST00000147957_5end | |association_with_transcript=25bp_to_ENSMUST00000147957_5end | ||
|cluster_id=chr14:45839419..45839450,+ | |||
|description=CAGE_peak_1_at_Gpr137c_5end | |description=CAGE_peak_1_at_Gpr137c_5end | ||
|id=chr14:45839419..45839450,+ | |id=chr14:45839419..45839450,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.02e-14!33;CL:0000047!1.02e-14!33;CL:0000031!1.02e-14!33;CL:0000404!1.02e-14!33;CL:0000221!1.78e-14!44;CL:0000133!1.78e-14!44;CL:0002319!5.34e-14!43;CL:0000117!4.51e-13!23;CL:0000337!4.51e-13!23;CL:0000393!7.21e-10!39;CL:0000211!7.21e-10!39;CL:0000055!3.73e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.51e-15,33;CL:0000047,6.51e-15,33;CL:0000031,6.51e-15,33;CL:0000404,6.51e-15,33;CL:0000221,1.15e-14,44;CL:0000133,1.15e-14,44;CL:0002319,3.50e-14,43;CL:0000117,3.06e-13,23;CL:0000337,3.06e-13,23;CL:0000393,1.10e-09,39;CL:0000211,1.10e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.61e-28!75;UBERON:0001016!2.61e-28!75;UBERON:0001017!1.30e-27!73;UBERON:0005743!1.30e-27!73;UBERON:0004121!6.27e-27!102;UBERON:0000924!6.27e-27!102;UBERON:0006601!6.27e-27!102;UBERON:0000033!9.76e-25!63;UBERON:0002346!2.65e-22!71;UBERON:0003075!2.65e-22!71;UBERON:0007284!2.65e-22!71;UBERON:0001049!1.01e-20!52;UBERON:0005068!1.01e-20!52;UBERON:0006241!1.01e-20!52;UBERON:0007135!1.01e-20!52;UBERON:0000955!5.16e-20!50;UBERON:0006238!5.16e-20!50;UBERON:0003056!1.72e-19!49;UBERON:0002616!2.68e-19!49;UBERON:0002020!1.27e-15!34;UBERON:0003080!2.91e-15!40;UBERON:0002780!1.29e-14!39;UBERON:0001890!1.29e-14!39;UBERON:0006240!1.29e-14!39;UBERON:0007811!2.08e-14!86;UBERON:0000153!4.82e-14!94;UBERON:0002791!6.45e-13!29;UBERON:0003528!6.45e-13!29;UBERON:0001893!6.45e-13!29;UBERON:0000956!8.09e-09!21;UBERON:0001869!8.09e-09!21;UBERON:0000203!8.09e-09!21;UBERON:0002619!2.68e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,7.21e-30,95;UBERON:0000924,7.21e-30,95;UBERON:0006601,7.21e-30,95;UBERON:0001016,1.05e-28,75;UBERON:0001017,5.35e-28,73;UBERON:0002346,2.42e-26,64;UBERON:0003075,2.42e-26,64;UBERON:0007284,2.42e-26,64;UBERON:0010371,7.00e-24,73;UBERON:0000073,1.67e-22,54;UBERON:0001049,5.26e-21,52;UBERON:0005068,5.26e-21,52;UBERON:0006241,5.26e-21,52;UBERON:0007135,5.26e-21,52;UBERON:0010314,2.98e-20,92;UBERON:0003056,9.36e-20,49;UBERON:0000955,2.96e-18,47;UBERON:0006238,2.96e-18,47;UBERON:0002616,1.51e-17,46;UBERON:0002020,7.89e-16,34;UBERON:0003080,1.83e-15,40;UBERON:0002780,8.26e-15,39;UBERON:0001890,8.26e-15,39;UBERON:0006240,8.26e-15,39;UBERON:0003528,4.39e-13,29;UBERON:0002791,4.39e-13,29;UBERON:0001893,4.39e-13,29;UBERON:0000956,6.32e-09,21;UBERON:0001869,6.32e-09,21;UBERON:0000203,6.32e-09,21;UBERON:0002619,2.20e-07,17 | |||
|phase1_expression=7.52699581392532,1.04692622291808,1.36499771816861,4.83942738090928,5.00895729946347,3.18970616632591,0.934450562382103,22.3383349553927,6.89864738543167,11.2350972634557,0.513653904676515,0.159544317990673,15.4080656938085,15.1237296184865,1.33243904726265,2.63217847606774,0.699561878128147,14.0380663584416,13.9856722277854,22.9170411970936,7.05859308253879,1.19149141441062,0.783599367416806,0.159992422793407,0,0.57423196411502,1.7230479846363,0.861884930743556,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,5.19932915552294,2.1610503896604,5.3084032628216,21.3451131675823,18.7520482685712,4.18818995179039,25.2939539853336,23.9065919735456,9.22469670759192,0.251793635951155,0.811015449756117,0.550640256485045,3.9119567217402,4.14247797122848,2.41654801007919,4.6663175777828,1.53985063787899,4.31257693094915,24.3284778783718,5.07753499407941,4.7053131879945,0.514518872071894,0.85960031981627,2.06268836910977,21.2432283902578,28.5655128806898,22.1840991227163,0.338844532069132,1.77858959222228,0.449949858640699,0.988866362566974,0.7104801149461,5.39280198933128,6.14749288514487,14.2054768862614,12.9605700798423,13.8814474491912,18.852964970651,14.3564551618549,15.8013130987291,15.7186572469908,22.9804696652505,37.4393995397922,22.3452841649078,24.577045320999,26.2453712583086,17.7486028588675,25.0038417867245,11.725685958058,18.5711661310454,17.1134037510027,25.0434297652618,21.0710087582672,21.6223357157349,8.93569081331572,9.21973033302783,13.6236309689789,0,4.0798280022465,0,1.29955283489534,0.448026887097336,2.10666630197628,0,0.519572009205738,0,17.3237406325317,0,0,0,0.432982082022428,0.760079596425296,0,2.05530983494308,3.6251303710604,0.148442139064825,3.81667718885499,3.04465478312141,2.07553947530453,2.11011696773672,3.99801604261396,0.125666591329675,0.741584903203122,1.44599356919912,0,1.94120219936891,0.662524555381181,0.484875253135222,0,38.6470652055242,41.889341362691,0,0.838705871541442,1.19980546198682,1.27070227073065,25.0150367806054,23.7900313465686,18.4711897605911,17.3824320192276,18.4115129277838,23.4800490352303,24.3361894601636,4.88828946481518,2.48813941220186,13.8997517138521,9.6803253707778,10.4096354370163,12.8745178482745,10.4436035287103,11.7549757911858,21.3634607335169,22.9323559309881,27.3609035714408,22.2484898835553,3.01795190105979,6.61871280587367,4.57472922826267,3.72632745126877,3.89266148915837,2.43776516565517,1.64625709126355,2.38841120182192,0.702213187313235,0,0.568326998791185,6.42089894860056,7.03578179943289,8.10279276574567,8.99629995223799,6.68998387941173,4.16521204795921,5.58081467400979,3.75582761959467,5.3712057488898,3.45575684818309,3.11918181750281,1.70244500046297,1.02339991197733,0.658650345873152,3.08674763148855,10.7247873767705,12.4514580978934,0.330418782983798,0,2.98603550749328,4.41249676534833,3.8660238396628,3.42861991859682,2.66853652613844,1.90225626112559,0,1.81168850196412,2.26201687920243,1.98956472041151,1.9496408711912,0,0.432276099749388,0.796565093017469,1.89667900953082,4.34144347916969,4.50830942692322,2.03651327845314,2.90928730751439,4.97964321221262,2.15004226222475,0.590440591918409,1.41298855057237,1.60416313098341,0.592905254174298,0.667380422864376,0.589676985339609,0.224862112384854,0.202860121388503,0.72353147925725,0,0.287696137450811,2.59416362840057,0,1.43768206527355,1.48856379067401,0.624075346229121,1.26289438973556,1.07638448113147,2.41221760681684,2.21703828199926,4.73728529426212,2.93336957595647,1.69745085775188,1.64283173801951,2.01007508930179,0.952174563544055,2.14647012643579,2.83743259391144,3.32197034473162,1.75400245523236,1.96635977658886,0.690739927463582,2.16973587872267,0,0,6.88469982226651,8.00216564283724,17.0183625387059,16.0580010631318,0.163934945376675,1.00988370881749,5.99465616890888,6.24701990874622,12.4945570685023,3.82350076724083,10.6943363559549,8.77537245445381,8.09621403349789,9.35218745316198,10.2774822266096,30.2042037436499,4.68402281187286,2.49291845134157,7.00413925220377,3.13443233647817,0,1.21390318077491,0.604647113929502,2.07465587731488,0.590603785761546,1.22974059177571,4.13485269069154,0.727067458955011,2.85197902707777,0.316036757935816,2.10837217149998,2.06271086496374,2.04263763452273,6.12207719706455,4.52755393239641,8.78781843629528,7.09360934569094,6.59964625127661,7.56925494769756,7.00269382963578,0,2.33015277950202,0.661585194164886,1.31909002353184,2.9063596805263,1.08563264870681,0.954978752025092,0.656563598980245,0.582961673259701,20.5822085231666,0.512612642393558,1.44470807574256,0.555583582109135,0.753473828018764,0.956859594047176,0.686334519619568,2.20971958992012,2.23922323717853,1.52019971184866,0.954670618015114,3.95419991976419,3.86306987541013,2.59212817972323,2.50905955217362,1.09181281873089,1.07891477107857,1.07449492442937,0.26175594198403,0.129614973291793,6.21339313086926,2.81846469342095,2.39226473670366,2.64733584731356,5.63908446197738,2.71235629303235,1.68956125490778,5.28107573905893,6.11960608766566,9.22762230946256,9.18019659138823,7.77681016896237,1.89606672376907,2.43270258348197,1.43795340030758,0.909445760844565,1.61124026100733,1.39076948346885,0.961563596159751,1.18151621739662,1.21159739937777,1.06689529317,1.10908803650525,1.07203668813728,1.82802499116626,1.8700304349051,1.36038230169127,0.221985953374065,0.0897138566094757,0.839423081820392,2.31827512838629,0.187682475451182,1.83151624267265,0.643105137237198,4.01257683228291,18.0720589637461,15.651058041244,16.6139698897425,20.4505286988988,16.4419804744954,14.3524840504043,21.6007200074178,14.4102785031751,20.3914084042892,15.5328093525546,2.80225838477277,9.57659696162474,8.87814749921498,6.07766792670735,2.51535795153579,4.41224420280034,4.22268782823069,5.76898160268904,4.49286893428541,5.05394423527595,4.30914809813408,5.65879024158229,4.49479235855436,6.53056554529667,5.28406314391642,8.09699275181225,5.91010062318763,4.62982129112892,3.70877310722976,5.00476328456951,4.11443102862498,6.03417740941747,7.86839426826159,4.94177816549917,5.17601592284318,4.99226186560891,3.84148743032822,4.99832451731901,3.93831930152999,5.61142271657738,5.81311588808453,4.72821515402705,4.09231043169689,6.66228417099654,4.05103883060397,9.49280196164194,3.27504251823572,3.65280791882107,5.7386499620653,2.20591419119516,1.39120701372253 | |phase1_expression=7.52699581392532,1.04692622291808,1.36499771816861,4.83942738090928,5.00895729946347,3.18970616632591,0.934450562382103,22.3383349553927,6.89864738543167,11.2350972634557,0.513653904676515,0.159544317990673,15.4080656938085,15.1237296184865,1.33243904726265,2.63217847606774,0.699561878128147,14.0380663584416,13.9856722277854,22.9170411970936,7.05859308253879,1.19149141441062,0.783599367416806,0.159992422793407,0,0.57423196411502,1.7230479846363,0.861884930743556,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,5.19932915552294,2.1610503896604,5.3084032628216,21.3451131675823,18.7520482685712,4.18818995179039,25.2939539853336,23.9065919735456,9.22469670759192,0.251793635951155,0.811015449756117,0.550640256485045,3.9119567217402,4.14247797122848,2.41654801007919,4.6663175777828,1.53985063787899,4.31257693094915,24.3284778783718,5.07753499407941,4.7053131879945,0.514518872071894,0.85960031981627,2.06268836910977,21.2432283902578,28.5655128806898,22.1840991227163,0.338844532069132,1.77858959222228,0.449949858640699,0.988866362566974,0.7104801149461,5.39280198933128,6.14749288514487,14.2054768862614,12.9605700798423,13.8814474491912,18.852964970651,14.3564551618549,15.8013130987291,15.7186572469908,22.9804696652505,37.4393995397922,22.3452841649078,24.577045320999,26.2453712583086,17.7486028588675,25.0038417867245,11.725685958058,18.5711661310454,17.1134037510027,25.0434297652618,21.0710087582672,21.6223357157349,8.93569081331572,9.21973033302783,13.6236309689789,0,4.0798280022465,0,1.29955283489534,0.448026887097336,2.10666630197628,0,0.519572009205738,0,17.3237406325317,0,0,0,0.432982082022428,0.760079596425296,0,2.05530983494308,3.6251303710604,0.148442139064825,3.81667718885499,3.04465478312141,2.07553947530453,2.11011696773672,3.99801604261396,0.125666591329675,0.741584903203122,1.44599356919912,0,1.94120219936891,0.662524555381181,0.484875253135222,0,38.6470652055242,41.889341362691,0,0.838705871541442,1.19980546198682,1.27070227073065,25.0150367806054,23.7900313465686,18.4711897605911,17.3824320192276,18.4115129277838,23.4800490352303,24.3361894601636,4.88828946481518,2.48813941220186,13.8997517138521,9.6803253707778,10.4096354370163,12.8745178482745,10.4436035287103,11.7549757911858,21.3634607335169,22.9323559309881,27.3609035714408,22.2484898835553,3.01795190105979,6.61871280587367,4.57472922826267,3.72632745126877,3.89266148915837,2.43776516565517,1.64625709126355,2.38841120182192,0.702213187313235,0,0.568326998791185,6.42089894860056,7.03578179943289,8.10279276574567,8.99629995223799,6.68998387941173,4.16521204795921,5.58081467400979,3.75582761959467,5.3712057488898,3.45575684818309,3.11918181750281,1.70244500046297,1.02339991197733,0.658650345873152,3.08674763148855,10.7247873767705,12.4514580978934,0.330418782983798,0,2.98603550749328,4.41249676534833,3.8660238396628,3.42861991859682,2.66853652613844,1.90225626112559,0,1.81168850196412,2.26201687920243,1.98956472041151,1.9496408711912,0,0.432276099749388,0.796565093017469,1.89667900953082,4.34144347916969,4.50830942692322,2.03651327845314,2.90928730751439,4.97964321221262,2.15004226222475,0.590440591918409,1.41298855057237,1.60416313098341,0.592905254174298,0.667380422864376,0.589676985339609,0.224862112384854,0.202860121388503,0.72353147925725,0,0.287696137450811,2.59416362840057,0,1.43768206527355,1.48856379067401,0.624075346229121,1.26289438973556,1.07638448113147,2.41221760681684,2.21703828199926,4.73728529426212,2.93336957595647,1.69745085775188,1.64283173801951,2.01007508930179,0.952174563544055,2.14647012643579,2.83743259391144,3.32197034473162,1.75400245523236,1.96635977658886,0.690739927463582,2.16973587872267,0,0,6.88469982226651,8.00216564283724,17.0183625387059,16.0580010631318,0.163934945376675,1.00988370881749,5.99465616890888,6.24701990874622,12.4945570685023,3.82350076724083,10.6943363559549,8.77537245445381,8.09621403349789,9.35218745316198,10.2774822266096,30.2042037436499,4.68402281187286,2.49291845134157,7.00413925220377,3.13443233647817,0,1.21390318077491,0.604647113929502,2.07465587731488,0.590603785761546,1.22974059177571,4.13485269069154,0.727067458955011,2.85197902707777,0.316036757935816,2.10837217149998,2.06271086496374,2.04263763452273,6.12207719706455,4.52755393239641,8.78781843629528,7.09360934569094,6.59964625127661,7.56925494769756,7.00269382963578,0,2.33015277950202,0.661585194164886,1.31909002353184,2.9063596805263,1.08563264870681,0.954978752025092,0.656563598980245,0.582961673259701,20.5822085231666,0.512612642393558,1.44470807574256,0.555583582109135,0.753473828018764,0.956859594047176,0.686334519619568,2.20971958992012,2.23922323717853,1.52019971184866,0.954670618015114,3.95419991976419,3.86306987541013,2.59212817972323,2.50905955217362,1.09181281873089,1.07891477107857,1.07449492442937,0.26175594198403,0.129614973291793,6.21339313086926,2.81846469342095,2.39226473670366,2.64733584731356,5.63908446197738,2.71235629303235,1.68956125490778,5.28107573905893,6.11960608766566,9.22762230946256,9.18019659138823,7.77681016896237,1.89606672376907,2.43270258348197,1.43795340030758,0.909445760844565,1.61124026100733,1.39076948346885,0.961563596159751,1.18151621739662,1.21159739937777,1.06689529317,1.10908803650525,1.07203668813728,1.82802499116626,1.8700304349051,1.36038230169127,0.221985953374065,0.0897138566094757,0.839423081820392,2.31827512838629,0.187682475451182,1.83151624267265,0.643105137237198,4.01257683228291,18.0720589637461,15.651058041244,16.6139698897425,20.4505286988988,16.4419804744954,14.3524840504043,21.6007200074178,14.4102785031751,20.3914084042892,15.5328093525546,2.80225838477277,9.57659696162474,8.87814749921498,6.07766792670735,2.51535795153579,4.41224420280034,4.22268782823069,5.76898160268904,4.49286893428541,5.05394423527595,4.30914809813408,5.65879024158229,4.49479235855436,6.53056554529667,5.28406314391642,8.09699275181225,5.91010062318763,4.62982129112892,3.70877310722976,5.00476328456951,4.11443102862498,6.03417740941747,7.86839426826159,4.94177816549917,5.17601592284318,4.99226186560891,3.84148743032822,4.99832451731901,3.93831930152999,5.61142271657738,5.81311588808453,4.72821515402705,4.09231043169689,6.66228417099654,4.05103883060397,9.49280196164194,3.27504251823572,3.65280791882107,5.7386499620653,2.20591419119516,1.39120701372253 | ||
|short_description=p1@Gpr137c | |short_description=p1@Gpr137c | ||
}} | }} |
Latest revision as of 23:28, 25 September 2015
Short description: | p1@Gpr137c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gpr137c_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 25bp_to_ENSMUST00000147957_5end |
EntrezGene: | Gpr137c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.51e-15 | 33 |
neuronal stem cell | 6.51e-15 | 33 |
neuroblast | 6.51e-15 | 33 |
electrically signaling cell | 6.51e-15 | 33 |
ectodermal cell | 1.15e-14 | 44 |
neurectodermal cell | 1.15e-14 | 44 |
neural cell | 3.50e-14 | 43 |
CNS neuron (sensu Vertebrata) | 3.06e-13 | 23 |
neuroblast (sensu Vertebrata) | 3.06e-13 | 23 |
electrically responsive cell | 1.10e-09 | 39 |
electrically active cell | 1.10e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 7.21e-30 | 95 |
ectoderm | 7.21e-30 | 95 |
presumptive ectoderm | 7.21e-30 | 95 |
nervous system | 1.05e-28 | 75 |
central nervous system | 5.35e-28 | 73 |
neurectoderm | 2.42e-26 | 64 |
neural plate | 2.42e-26 | 64 |
presumptive neural plate | 2.42e-26 | 64 |
ecto-epithelium | 7.00e-24 | 73 |
regional part of nervous system | 1.67e-22 | 54 |
neural tube | 5.26e-21 | 52 |
neural rod | 5.26e-21 | 52 |
future spinal cord | 5.26e-21 | 52 |
neural keel | 5.26e-21 | 52 |
structure with developmental contribution from neural crest | 2.98e-20 | 92 |
pre-chordal neural plate | 9.36e-20 | 49 |
brain | 2.96e-18 | 47 |
future brain | 2.96e-18 | 47 |
regional part of brain | 1.51e-17 | 46 |
gray matter | 7.89e-16 | 34 |
anterior neural tube | 1.83e-15 | 40 |
regional part of forebrain | 8.26e-15 | 39 |
forebrain | 8.26e-15 | 39 |
future forebrain | 8.26e-15 | 39 |
brain grey matter | 4.39e-13 | 29 |
regional part of telencephalon | 4.39e-13 | 29 |
telencephalon | 4.39e-13 | 29 |
cerebral cortex | 6.32e-09 | 21 |
cerebral hemisphere | 6.32e-09 | 21 |
pallium | 6.32e-09 | 21 |
regional part of cerebral cortex | 2.20e-07 | 17 |