FFCP PHASE1:Mm9::chr2:155102075..155102086,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66734 | |EntrezGene=66734 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1294 | |||
|TSSclassifier=NA | |||
|UniProt=Q91VR7 | |UniProt=Q91VR7 | ||
|association_with_transcript=42bp_to_ENSMUST00000029128_5end | |association_with_transcript=42bp_to_ENSMUST00000029128_5end | ||
|cluster_id=chr2:155102075..155102086,+ | |||
|description=CAGE_peak_8_at_Map1lc3a_5end | |description=CAGE_peak_8_at_Map1lc3a_5end | ||
|id=chr2:155102075..155102086,+ | |id=chr2:155102075..155102086,+ | ||
|ontology_enrichment_celltype=CL:0002319!7.11e-19!43;CL:0000221!1.27e-18!44;CL:0000133!1.27e-18!44;CL:0000540!3.39e-16!33;CL:0000047!3.39e-16!33;CL:0000031!3.39e-16!33;CL:0000404!3.39e-16!33;CL:0000055!5.03e-16!50;CL:0000393!3.00e-14!39;CL:0000211!3.00e-14!39;CL:0000117!4.91e-13!23;CL:0000337!4.91e-13!23;CL:0002321!1.15e-07!70;CL:0000220!1.15e-07!70 | |ontology_enrichment_celltype=CL:0002319!7.11e-19!43;CL:0000221!1.27e-18!44;CL:0000133!1.27e-18!44;CL:0000540!3.39e-16!33;CL:0000047!3.39e-16!33;CL:0000031!3.39e-16!33;CL:0000404!3.39e-16!33;CL:0000055!5.03e-16!50;CL:0000393!3.00e-14!39;CL:0000211!3.00e-14!39;CL:0000117!4.91e-13!23;CL:0000337!4.91e-13!23;CL:0002321!1.15e-07!70;CL:0000220!1.15e-07!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.28e-21,43;CL:0000221,4.52e-20,44;CL:0000133,4.52e-20,44;CL:0000540,2.54e-18,33;CL:0000047,2.54e-18,33;CL:0000031,2.54e-18,33;CL:0000404,2.54e-18,33;CL:0000393,2.67e-16,39;CL:0000211,2.67e-16,39;CL:0000117,3.22e-15,23;CL:0000337,3.22e-15,23;CL:0002321,4.01e-09,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.85e-25!73;UBERON:0005743!6.85e-25!73;UBERON:0004121!5.66e-24!102;UBERON:0000924!5.66e-24!102;UBERON:0006601!5.66e-24!102;UBERON:0000073!6.04e-24!75;UBERON:0001016!6.04e-24!75;UBERON:0002346!2.32e-16!71;UBERON:0003075!2.32e-16!71;UBERON:0007284!2.32e-16!71;UBERON:0001049!6.80e-15!52;UBERON:0005068!6.80e-15!52;UBERON:0006241!6.80e-15!52;UBERON:0007135!6.80e-15!52;UBERON:0000033!2.68e-14!63;UBERON:0000955!1.55e-13!50;UBERON:0006238!1.55e-13!50;UBERON:0002616!3.09e-13!49;UBERON:0002020!3.52e-12!34;UBERON:0003056!1.51e-10!49;UBERON:0003080!6.53e-10!40;UBERON:0002780!1.55e-09!39;UBERON:0001890!1.55e-09!39;UBERON:0006240!1.55e-09!39;UBERON:0002791!3.70e-09!29;UBERON:0003528!3.70e-09!29;UBERON:0001893!3.70e-09!29 | |ontology_enrichment_uberon=UBERON:0001017!6.85e-25!73;UBERON:0005743!6.85e-25!73;UBERON:0004121!5.66e-24!102;UBERON:0000924!5.66e-24!102;UBERON:0006601!5.66e-24!102;UBERON:0000073!6.04e-24!75;UBERON:0001016!6.04e-24!75;UBERON:0002346!2.32e-16!71;UBERON:0003075!2.32e-16!71;UBERON:0007284!2.32e-16!71;UBERON:0001049!6.80e-15!52;UBERON:0005068!6.80e-15!52;UBERON:0006241!6.80e-15!52;UBERON:0007135!6.80e-15!52;UBERON:0000033!2.68e-14!63;UBERON:0000955!1.55e-13!50;UBERON:0006238!1.55e-13!50;UBERON:0002616!3.09e-13!49;UBERON:0002020!3.52e-12!34;UBERON:0003056!1.51e-10!49;UBERON:0003080!6.53e-10!40;UBERON:0002780!1.55e-09!39;UBERON:0001890!1.55e-09!39;UBERON:0006240!1.55e-09!39;UBERON:0002791!3.70e-09!29;UBERON:0003528!3.70e-09!29;UBERON:0001893!3.70e-09!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.72e-27,73;UBERON:0001016,1.90e-25,75;UBERON:0004121,2.77e-23,95;UBERON:0000924,2.77e-23,95;UBERON:0006601,2.77e-23,95;UBERON:0010314,4.10e-21,92;UBERON:0000073,6.89e-18,54;UBERON:0002346,1.61e-16,64;UBERON:0003075,1.61e-16,64;UBERON:0007284,1.61e-16,64;UBERON:0010371,6.71e-16,73;UBERON:0001049,7.01e-16,52;UBERON:0005068,7.01e-16,52;UBERON:0006241,7.01e-16,52;UBERON:0007135,7.01e-16,52;UBERON:0000955,2.18e-13,47;UBERON:0006238,2.18e-13,47;UBERON:0002020,2.62e-13,34;UBERON:0002616,4.82e-13,46;UBERON:0003056,1.40e-10,49;UBERON:0003080,2.02e-10,40;UBERON:0002780,5.47e-10,39;UBERON:0001890,5.47e-10,39;UBERON:0006240,5.47e-10,39;UBERON:0003528,8.56e-10,29;UBERON:0002791,8.56e-10,29;UBERON:0001893,8.56e-10,29 | |||
|phase1_expression=2.40223270657191,1.04692622291808,0.454999239389536,0.60492842261366,0.500895729946347,0,0,0.129123323441576,0,0,0,0.0797721589953364,0,0.437102012094987,0,0.404950534779652,0,0.157731082679119,0.685572168028694,0.42438965179803,2.8064285749853,0.198581902401771,0,0.319984845586813,0.45881856213434,0.57423196411502,0.430761996159075,0,0,0.504060259519861,0.221730510655305,0,0.61506478758457,0,0.288851619751275,0.166234645358492,0.408338712524738,1.67412652294763,0.7813353445238,1.0470474879476,1.17646297606203,1.36609096991689,0.485510353031154,0.503587271902309,1.31790010585369,0.550640256485045,7.82391344348039,1.74420125104357,1.31811709640683,2.3331587888914,2.65974201088189,5.75010257459886,0.167782606057736,0,0.672187598284928,0,2.0057340795713,2.06268836910977,6.06949382578793,10.0508286061686,7.60597684207415,2.37191172448392,1.77858959222228,0.899899717281399,0.988866362566974,0.7104801149461,5.09320187881288,8.4528027170742,2.90330914463737,2.56511282830212,1.68259969081106,6.28432165688368,6.84692476950002,2.32732518508413,2.1086003624012,2.75765635983006,3.30347642998166,1.27687338085188,2.76491759861238,5.80299666012853,5.58074625974699,2.08365348222704,2.51264699101243,2.25105044012672,3.51435969886663,7.36571463684169,4.8406371471695,4.65998614563251,0.984440513331393,0.302286240427142,0.289864488701678,0,0.679971333707751,0.539703191637817,0,0.448026887097336,0.842666520790511,0.170430322578058,1.03914401841148,0.35333957451034,0.985903938436763,1.28326477414318,0,0,0.649473123033642,0.253359865475099,1.01104889002957,1.25602267690966,0,0.742210695324124,1.56136794089522,0.913396434936424,1.15307748628029,0.753613202763113,1.52865319276416,1.63366568728578,0.247194967734374,1.01219549843938,0,2.58826959915855,0.662524555381181,0.969750506270444,0,1.75668478206928,2.30391377494801,0,0.718890747035522,0,0.508280908292259,2.24685959107234,1.37250180845588,3.01570445070875,1.21677024134594,0.511430914660661,2.70124457927428,1.78465389374533,0.611036183101898,0.870848794270651,1.26361379216837,0.841767423545896,1.43132487258974,2.06911893990126,1.44049703844279,1.50704817835715,1.42876648217788,1.0249097622788,1.96773621575431,0.776110112217047,0.215567992932842,1.51284864134255,1.05570674498369,1.31517439456545,1.11218899690239,1.0447564995665,0.823128545631774,0.199034266818493,0,0,0.852490498186778,0.828503090142008,1.40715635988658,1.62055855314913,1.42046841351126,2.75469924446365,1.69693824176116,2.32533944750408,1.60964040839772,2.33530684734339,1.97471819896177,1.97000956894914,2.26992666728396,2.33919979880532,1.53685080703735,2.81833479396781,1.47202963994889,1.9551876352064,0.660837565967596,0,0.426576501070468,1.39342003116263,0.257734922644187,0.201683524623343,0,0.570676878337677,0.474529061544512,0,1.25667604400135,0.198956472041151,0.19496408711912,0,0.432276099749388,0.199141273254367,1.51734320762465,0.913988100877831,0,0.407302655690628,0.775809948670503,0.561086559122548,0.442655759869801,0.590440591918409,0.31399745568275,0.246794327843601,0.296452627087149,0.83422552858047,0,0.224862112384854,0.405720242777006,0,0.50925170356284,0.575392274901621,0.162135226775035,0,0,0,0,0,0.538192240565737,0.482443521363367,0.184753190166605,0.757965647081939,0.977789858652155,0.339490171550376,0.938760993154008,0.670025029767263,0.952174563544055,0,0.630540576424764,0.221464689648775,0.478364305972461,1.3109065177259,0.345369963731791,0.433947175744535,0,0,1.47529281905711,0.551873492609465,2.0871576698413,2.22702204525186,0.819674726883377,1.76729649043061,0.94652465824877,3.12350995437311,2.36965737506079,2.15071918157297,1.33679204449436,2.26461224631066,2.02405350837447,2.04579100537918,4.34816555741176,1.92792789853084,0.425820255624806,0.712262414669021,2.28041743095006,0.989820737835213,1.32745138339963,1.45668381692989,0.604647113929502,0.377210159511796,0.590603785761546,0.307435147943927,0.516856586336442,0.363533729477506,0,0,1.05418608574999,3.09406629744561,0.340439605753788,0.900305470156551,1.55230420539305,1.92903331528433,1.59606210278046,1.07021290561242,1.15184314421485,1.2178597964584,0.704015124191131,0.847328283455281,0,2.4732937941222,1.93757312035087,0.663442174209714,0.835606408021955,1.14898629821543,0.582961673259701,0.741701208042039,0.170870880797853,0.82554747185289,0.185194527369712,0.565105371014073,0.136694227721025,0,0.509935289981566,0.559805809294632,0.414599921413271,0.954670618015114,1.10717597753397,0.609958401380546,0.324016022465404,1.04544148007234,0.87345025498471,0.674321731924103,0.826534557253359,1.30877970992015,0.259229946583586,0.621339313086926,5.6369293868419,0.448549638131936,1.32366792365678,1.94451188344048,1.93739735216597,1.18269287843545,0.938857909166032,1.17183946359555,1.46803082195995,0.483168241652012,5.47257011889944,0.632022241256357,1.62180172232131,0.616265742988964,0.389762468933385,0.179026695667481,0.198681354781265,0.240390899039938,0.738447635872886,0.302899349844443,0.762068066549998,0.2016523702736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| ||
|short_description=p8@Map1lc3a | |short_description=p8@Map1lc3a | ||
}} | }} |
Latest revision as of 23:30, 25 September 2015
Short description: | p8@Map1lc3a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Map1lc3a_5end |
Coexpression cluster: | MCL_coexpression_mm9:1294 |
Association with transcript: | 42bp_to_ENSMUST00000029128_5end |
EntrezGene: | Map1lc3a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.28e-21 | 43 |
ectodermal cell | 4.52e-20 | 44 |
neurectodermal cell | 4.52e-20 | 44 |
neuron | 2.54e-18 | 33 |
neuronal stem cell | 2.54e-18 | 33 |
neuroblast | 2.54e-18 | 33 |
electrically signaling cell | 2.54e-18 | 33 |
electrically responsive cell | 2.67e-16 | 39 |
electrically active cell | 2.67e-16 | 39 |
CNS neuron (sensu Vertebrata) | 3.22e-15 | 23 |
neuroblast (sensu Vertebrata) | 3.22e-15 | 23 |
embryonic cell | 4.01e-09 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.72e-27 | 73 |
nervous system | 1.90e-25 | 75 |
ectoderm-derived structure | 2.77e-23 | 95 |
ectoderm | 2.77e-23 | 95 |
presumptive ectoderm | 2.77e-23 | 95 |
structure with developmental contribution from neural crest | 4.10e-21 | 92 |
regional part of nervous system | 6.89e-18 | 54 |
neurectoderm | 1.61e-16 | 64 |
neural plate | 1.61e-16 | 64 |
presumptive neural plate | 1.61e-16 | 64 |
ecto-epithelium | 6.71e-16 | 73 |
neural tube | 7.01e-16 | 52 |
neural rod | 7.01e-16 | 52 |
future spinal cord | 7.01e-16 | 52 |
neural keel | 7.01e-16 | 52 |
brain | 2.18e-13 | 47 |
future brain | 2.18e-13 | 47 |
gray matter | 2.62e-13 | 34 |
regional part of brain | 4.82e-13 | 46 |
pre-chordal neural plate | 1.40e-10 | 49 |
anterior neural tube | 2.02e-10 | 40 |
regional part of forebrain | 5.47e-10 | 39 |
forebrain | 5.47e-10 | 39 |
future forebrain | 5.47e-10 | 39 |
brain grey matter | 8.56e-10 | 29 |
regional part of telencephalon | 8.56e-10 | 29 |
telencephalon | 8.56e-10 | 29 |