FFCP PHASE1:Mm9::chr2:155102075..155102086,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66734 | |EntrezGene=66734 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1294 | |||
|TSSclassifier=NA | |||
|UniProt=Q91VR7 | |UniProt=Q91VR7 | ||
|association_with_transcript=42bp_to_ENSMUST00000029128_5end | |association_with_transcript=42bp_to_ENSMUST00000029128_5end | ||
|cluster_id=chr2:155102075..155102086,+ | |||
|description=CAGE_peak_8_at_Map1lc3a_5end | |description=CAGE_peak_8_at_Map1lc3a_5end | ||
|id=chr2:155102075..155102086,+ | |id=chr2:155102075..155102086,+ | ||
|ontology_enrichment_celltype=CL:0002319!7.11e-19!43;CL:0000221!1.27e-18!44;CL:0000133!1.27e-18!44;CL:0000540!3.39e-16!33;CL:0000047!3.39e-16!33;CL:0000031!3.39e-16!33;CL:0000404!3.39e-16!33;CL:0000055!5.03e-16!50;CL:0000393!3.00e-14!39;CL:0000211!3.00e-14!39;CL:0000117!4.91e-13!23;CL:0000337!4.91e-13!23;CL:0002321!1.15e-07!70;CL:0000220!1.15e-07!70 | |ontology_enrichment_celltype=CL:0002319!7.11e-19!43;CL:0000221!1.27e-18!44;CL:0000133!1.27e-18!44;CL:0000540!3.39e-16!33;CL:0000047!3.39e-16!33;CL:0000031!3.39e-16!33;CL:0000404!3.39e-16!33;CL:0000055!5.03e-16!50;CL:0000393!3.00e-14!39;CL:0000211!3.00e-14!39;CL:0000117!4.91e-13!23;CL:0000337!4.91e-13!23;CL:0002321!1.15e-07!70;CL:0000220!1.15e-07!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.28e-21,43;CL:0000221,4.52e-20,44;CL:0000133,4.52e-20,44;CL:0000540,2.54e-18,33;CL:0000047,2.54e-18,33;CL:0000031,2.54e-18,33;CL:0000404,2.54e-18,33;CL:0000393,2.67e-16,39;CL:0000211,2.67e-16,39;CL:0000117,3.22e-15,23;CL:0000337,3.22e-15,23;CL:0002321,4.01e-09,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.85e-25!73;UBERON:0005743!6.85e-25!73;UBERON:0004121!5.66e-24!102;UBERON:0000924!5.66e-24!102;UBERON:0006601!5.66e-24!102;UBERON:0000073!6.04e-24!75;UBERON:0001016!6.04e-24!75;UBERON:0002346!2.32e-16!71;UBERON:0003075!2.32e-16!71;UBERON:0007284!2.32e-16!71;UBERON:0001049!6.80e-15!52;UBERON:0005068!6.80e-15!52;UBERON:0006241!6.80e-15!52;UBERON:0007135!6.80e-15!52;UBERON:0000033!2.68e-14!63;UBERON:0000955!1.55e-13!50;UBERON:0006238!1.55e-13!50;UBERON:0002616!3.09e-13!49;UBERON:0002020!3.52e-12!34;UBERON:0003056!1.51e-10!49;UBERON:0003080!6.53e-10!40;UBERON:0002780!1.55e-09!39;UBERON:0001890!1.55e-09!39;UBERON:0006240!1.55e-09!39;UBERON:0002791!3.70e-09!29;UBERON:0003528!3.70e-09!29;UBERON:0001893!3.70e-09!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.72e-27,73;UBERON:0001016,1.90e-25,75;UBERON:0004121,2.77e-23,95;UBERON:0000924,2.77e-23,95;UBERON:0006601,2.77e-23,95;UBERON:0010314,4.10e-21,92;UBERON:0000073,6.89e-18,54;UBERON:0002346,1.61e-16,64;UBERON:0003075,1.61e-16,64;UBERON:0007284,1.61e-16,64;UBERON:0010371,6.71e-16,73;UBERON:0001049,7.01e-16,52;UBERON:0005068,7.01e-16,52;UBERON:0006241,7.01e-16,52;UBERON:0007135,7.01e-16,52;UBERON:0000955,2.18e-13,47;UBERON:0006238,2.18e-13,47;UBERON:0002020,2.62e-13,34;UBERON:0002616,4.82e-13,46;UBERON:0003056,1.40e-10,49;UBERON:0003080,2.02e-10,40;UBERON:0002780,5.47e-10,39;UBERON:0001890,5.47e-10,39;UBERON:0006240,5.47e-10,39;UBERON:0003528,8.56e-10,29;UBERON:0002791,8.56e-10,29;UBERON:0001893,8.56e-10,29 | |||
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| ||
|short_description=p8@Map1lc3a | |short_description=p8@Map1lc3a | ||
}} | }} |
Latest revision as of 23:30, 25 September 2015
Short description: | p8@Map1lc3a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Map1lc3a_5end |
Coexpression cluster: | MCL_coexpression_mm9:1294 |
Association with transcript: | 42bp_to_ENSMUST00000029128_5end |
EntrezGene: | Map1lc3a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.28e-21 | 43 |
ectodermal cell | 4.52e-20 | 44 |
neurectodermal cell | 4.52e-20 | 44 |
neuron | 2.54e-18 | 33 |
neuronal stem cell | 2.54e-18 | 33 |
neuroblast | 2.54e-18 | 33 |
electrically signaling cell | 2.54e-18 | 33 |
electrically responsive cell | 2.67e-16 | 39 |
electrically active cell | 2.67e-16 | 39 |
CNS neuron (sensu Vertebrata) | 3.22e-15 | 23 |
neuroblast (sensu Vertebrata) | 3.22e-15 | 23 |
embryonic cell | 4.01e-09 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.72e-27 | 73 |
nervous system | 1.90e-25 | 75 |
ectoderm-derived structure | 2.77e-23 | 95 |
ectoderm | 2.77e-23 | 95 |
presumptive ectoderm | 2.77e-23 | 95 |
structure with developmental contribution from neural crest | 4.10e-21 | 92 |
regional part of nervous system | 6.89e-18 | 54 |
neurectoderm | 1.61e-16 | 64 |
neural plate | 1.61e-16 | 64 |
presumptive neural plate | 1.61e-16 | 64 |
ecto-epithelium | 6.71e-16 | 73 |
neural tube | 7.01e-16 | 52 |
neural rod | 7.01e-16 | 52 |
future spinal cord | 7.01e-16 | 52 |
neural keel | 7.01e-16 | 52 |
brain | 2.18e-13 | 47 |
future brain | 2.18e-13 | 47 |
gray matter | 2.62e-13 | 34 |
regional part of brain | 4.82e-13 | 46 |
pre-chordal neural plate | 1.40e-10 | 49 |
anterior neural tube | 2.02e-10 | 40 |
regional part of forebrain | 5.47e-10 | 39 |
forebrain | 5.47e-10 | 39 |
future forebrain | 5.47e-10 | 39 |
brain grey matter | 8.56e-10 | 29 |
regional part of telencephalon | 8.56e-10 | 29 |
telencephalon | 8.56e-10 | 29 |