FFCP PHASE1:Mm9::chr5:36873138..36873236,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100855 | |EntrezGene=100855 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |MCL_coexpression_id=22 | ||
|TSSclassifier=NA | |||
|UniProt=D6RHS3,E9PZY7 | |UniProt=D6RHS3,E9PZY7 | ||
|association_with_transcript=0bp_to_ENSMUST00000141017,ENSMUST00000141626,ENSMUST00000150813_5end | |association_with_transcript=0bp_to_ENSMUST00000141017,ENSMUST00000141626,ENSMUST00000150813_5end | ||
|cluster_id=chr5:36873138..36873236,- | |||
|description=CAGE_peak_1_at_Tbc1d14_5end | |description=CAGE_peak_1_at_Tbc1d14_5end | ||
|id=chr5:36873138..36873236,- | |id=chr5:36873138..36873236,- | ||
|ontology_enrichment_celltype=CL:0000540!4.25e-17!33;CL:0000047!4.25e-17!33;CL:0000031!4.25e-17!33;CL:0000404!4.25e-17!33;CL:0000393!1.26e-15!39;CL:0000211!1.26e-15!39;CL:0000117!4.21e-15!23;CL:0000337!4.21e-15!23;CL:0000221!1.11e-13!44;CL:0000133!1.11e-13!44;CL:0002319!3.25e-13!43;CL:0000055!1.06e-11!50;CL:0002321!8.18e-08!70;CL:0000220!8.18e-08!70 | |ontology_enrichment_celltype=CL:0000540!4.25e-17!33;CL:0000047!4.25e-17!33;CL:0000031!4.25e-17!33;CL:0000404!4.25e-17!33;CL:0000393!1.26e-15!39;CL:0000211!1.26e-15!39;CL:0000117!4.21e-15!23;CL:0000337!4.21e-15!23;CL:0000221!1.11e-13!44;CL:0000133!1.11e-13!44;CL:0002319!3.25e-13!43;CL:0000055!1.06e-11!50;CL:0002321!8.18e-08!70;CL:0000220!8.18e-08!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.24e-17,33;CL:0000047,4.24e-17,33;CL:0000031,4.24e-17,33;CL:0000404,4.24e-17,33;CL:0000393,1.25e-15,39;CL:0000211,1.25e-15,39;CL:0000117,4.20e-15,23;CL:0000337,4.20e-15,23;CL:0000221,1.11e-13,44;CL:0000133,1.11e-13,44;CL:0002319,3.24e-13,43;CL:0002321,8.10e-08,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.15e-29!73;UBERON:0005743!2.15e-29!73;UBERON:0004121!5.88e-29!102;UBERON:0000924!5.88e-29!102;UBERON:0006601!5.88e-29!102;UBERON:0000073!1.29e-28!75;UBERON:0001016!1.29e-28!75;UBERON:0002346!1.59e-25!71;UBERON:0003075!1.59e-25!71;UBERON:0007284!1.59e-25!71;UBERON:0001049!2.07e-23!52;UBERON:0005068!2.07e-23!52;UBERON:0006241!2.07e-23!52;UBERON:0007135!2.07e-23!52;UBERON:0000955!9.40e-22!50;UBERON:0006238!9.40e-22!50;UBERON:0002616!1.96e-21!49;UBERON:0000033!3.04e-21!63;UBERON:0003056!8.08e-19!49;UBERON:0003080!1.43e-18!40;UBERON:0002780!4.88e-18!39;UBERON:0001890!4.88e-18!39;UBERON:0006240!4.88e-18!39;UBERON:0002020!5.62e-18!34;UBERON:0002791!4.23e-15!29;UBERON:0003528!4.23e-15!29;UBERON:0001893!4.23e-15!29;UBERON:0000153!3.98e-14!94;UBERON:0007811!2.32e-12!86;UBERON:0000956!1.19e-10!21;UBERON:0001869!1.19e-10!21;UBERON:0000203!1.19e-10!21;UBERON:0002619!3.53e-08!17 | |ontology_enrichment_uberon=UBERON:0001017!2.15e-29!73;UBERON:0005743!2.15e-29!73;UBERON:0004121!5.88e-29!102;UBERON:0000924!5.88e-29!102;UBERON:0006601!5.88e-29!102;UBERON:0000073!1.29e-28!75;UBERON:0001016!1.29e-28!75;UBERON:0002346!1.59e-25!71;UBERON:0003075!1.59e-25!71;UBERON:0007284!1.59e-25!71;UBERON:0001049!2.07e-23!52;UBERON:0005068!2.07e-23!52;UBERON:0006241!2.07e-23!52;UBERON:0007135!2.07e-23!52;UBERON:0000955!9.40e-22!50;UBERON:0006238!9.40e-22!50;UBERON:0002616!1.96e-21!49;UBERON:0000033!3.04e-21!63;UBERON:0003056!8.08e-19!49;UBERON:0003080!1.43e-18!40;UBERON:0002780!4.88e-18!39;UBERON:0001890!4.88e-18!39;UBERON:0006240!4.88e-18!39;UBERON:0002020!5.62e-18!34;UBERON:0002791!4.23e-15!29;UBERON:0003528!4.23e-15!29;UBERON:0001893!4.23e-15!29;UBERON:0000153!3.98e-14!94;UBERON:0007811!2.32e-12!86;UBERON:0000956!1.19e-10!21;UBERON:0001869!1.19e-10!21;UBERON:0000203!1.19e-10!21;UBERON:0002619!3.53e-08!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.14e-29,73;UBERON:0001016,1.28e-28,75;UBERON:0004121,1.31e-27,95;UBERON:0000924,1.31e-27,95;UBERON:0006601,1.31e-27,95;UBERON:0010371,2.69e-25,73;UBERON:0002346,1.22e-24,64;UBERON:0003075,1.22e-24,64;UBERON:0007284,1.22e-24,64;UBERON:0000073,1.63e-24,54;UBERON:0001049,2.07e-23,52;UBERON:0005068,2.07e-23,52;UBERON:0006241,2.07e-23,52;UBERON:0007135,2.07e-23,52;UBERON:0000955,5.04e-20,47;UBERON:0006238,5.04e-20,47;UBERON:0002616,1.03e-19,46;UBERON:0003056,8.07e-19,49;UBERON:0003080,1.43e-18,40;UBERON:0010314,3.75e-18,92;UBERON:0002780,4.87e-18,39;UBERON:0001890,4.87e-18,39;UBERON:0006240,4.87e-18,39;UBERON:0002020,5.61e-18,34;UBERON:0003528,4.22e-15,29;UBERON:0002791,4.22e-15,29;UBERON:0001893,4.22e-15,29;UBERON:0000956,1.19e-10,21;UBERON:0001869,1.19e-10,21;UBERON:0000203,1.19e-10,21;UBERON:0002619,3.52e-08,17 | |||
|phase1_expression=14.733693933641,3.48975407639361,4.54999239389536,0,0.500895729946347,17.1236857350128,11.2134067485852,1.03298658753261,0.985521055061667,0.70219357896598,1.88339765048055,2.79202556483677,1.19840510951844,1.13646523144697,4.33042690360362,4.04950534779652,1.39912375625629,1.73504190947031,2.4680598049033,2.54633791078818,6.03807360072595,7.64540324246817,8.35839325244593,8.47959840805055,4.35877634027623,4.59385571292016,7.32295393470427,7.54149314400612,2.28028103347649,2.26827116783938,5.76499327703792,16.5107975099504,23.9875267157982,0,7.51014211353314,4.65457007003779,7.14592746918292,0.837063261473815,0,1.57057123192139,0,0,0,12.4637849795822,11.1514624341466,8.44315059943735,4.69434806608824,10.0291571935005,8.78744730937887,7.97162586204562,12.0388322597812,4.31257693094915,1.8456086666351,0,2.35265659399725,4.63066984864705,12.0344044774278,9.7977697532714,39.8563427893408,46.5512061759389,39.2975470173831,6.77689064138264,9.78224275722253,4.94944844504769,2.96659908770092,3.5524005747305,8.38880309451533,9.98967593836042,54.8518049111847,63.5877969542263,59.3116391010897,25.1372866275347,24.9581451275323,55.6108228435891,57.1239007268689,66.1837526359215,25.3266526298594,23.4944702076745,23.6554061214615,39.434000031328,40.0715878978554,23.962015045611,26.5223849051312,21.9477417912355,25.2117108831737,25.6326869362091,22.4947255662583,37.839087502536,5.90664307998836,9.74873125377533,15.6526823898906,2.58127163094416,9.51959867190851,3.2382191498269,7.79731700937203,4.03224198387602,3.5111105032938,6.64678258054425,4.1565760736459,4.94675404314476,20.5631392873954,10.2661181931454,10.1922095882658,21.3320010945999,2.81438353314578,3.04031838570118,7.07734223020697,3.19714863213368,6.21450920753212,11.1331604298619,13.3583701609925,9.13396434936424,14.2981608298756,14.6200961336044,12.6995803706561,11.0586600370114,3.21353458054686,7.51916655983541,3.5384422077995,8.08834249737046,5.74187947997023,5.33362778448744,0,18.1524094147159,18.0124167859571,1.53274233125155,5.03223522924865,5.39912457894067,2.41433431438823,23.0677584683427,16.9275223042892,54.1570257606446,22.7709859451882,23.0143911597297,22.648896856992,28.8789448260609,10.2857757488819,3.35898820647251,2.52722758433675,5.89237196482127,15.8746940414499,13.104419952708,14.2249082546226,11.4535661555143,11.7022778540284,11.1458936647819,14.8048724804372,9.8307280880826,15.3053274982318,15.5066985737612,17.4191612922309,17.7548543266336,13.6243152120543,11.1440693287093,13.9931852757402,13.5343301436575,2.80885274925294,3.08817488537658,3.12579849335152,9.32065976409758,7.27030785941398,7.20248245844059,8.75955521665278,7.47704080640135,6.94202007993202,5.34828072925938,6.43856163359086,3.73649095574942,8.06343264576054,2.62667942526552,4.45878452502207,4.5321996101853,4.61055242111206,4.96563749413376,25.0245038791311,49.8058323915737,0.330418782983798,2.64450566663544,18.7693660471006,12.7730169523241,10.4382643670896,10.4875432804138,6.67134131534611,5.51654315726422,3.32170343081158,4.6115707322723,4.52403375840485,5.37182474511107,3.70431765526328,0.898819408654221,4.10662294761919,3.38540164532424,11.569741958138,11.7675967988021,10.1436962105772,8.5533557695032,12.412959178728,7.71494018793504,7.3986748435381,4.87113488332687,5.96595165797224,4.68909222902842,1.48226313543574,4.67166296005063,7.27268281918851,3.37293168577281,3.44862206360455,3.37648023653384,3.31013607315846,3.16465751195892,2.7562988551756,3.84385978463314,4.31304619582064,5.58211421502755,5.30464044294753,4.54641980304801,3.22915344339442,0.964887042726734,5.72734889516475,11.9379589415405,12.385338209594,12.3913912615887,11.4998221661366,5.69521275302174,6.9032655856944,5.26860849216057,8.51229778173431,5.53661724121937,9.08892181347676,8.52089236521838,8.63424909329478,5.20736610893442,6.03165135757089,4.89515115436839,14.2611639175521,16.5562047782839,31.1468144576316,33.6397540519623,15.5738198107842,3.28212205365685,11.9893123378178,13.6653560503823,17.2338718186239,14.8160654730582,14.2591151412732,20.0984336860071,15.382806663646,14.6127928955656,10.6727700045561,14.7807805554031,10.3616262202036,17.9846259703928,11.2392001953967,9.89820737835213,2.65490276679926,12.1390318077491,9.37203026590728,7.92141334974772,6.79194353625777,8.30074899448604,5.42699415653264,11.6330793432802,9.26893183800275,6.32073515871632,1.05418608574999,8.25084345985495,14.9793426531667,17.1058039329745,17.9808570458029,13.7175702420219,13.6551979904551,14.2695054081656,17.4421961838248,9.43841342255258,6.10146440965647,11.0152676849186,3.96951116498931,9.39851641766436,10.172258881842,8.50412241486998,9.31104283224465,9.52017218521355,2.33184669303881,31.1514507377656,4.27177201994632,10.3193433981611,5.18544676635193,4.52084296811258,2.1871076435364,3.20289442489132,5.77926661979108,5.03825228365169,3.73139929271944,4.77335309007557,14.8677916983134,13.0124458961183,12.7446302169725,13.7998275369549,8.51613998610093,5.79916689454729,7.02554373665355,4.711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| |phase1_expression=14.733693933641,3.48975407639361,4.54999239389536,0,0.500895729946347,17.1236857350128,11.2134067485852,1.03298658753261,0.985521055061667,0.70219357896598,1.88339765048055,2.79202556483677,1.19840510951844,1.13646523144697,4.33042690360362,4.04950534779652,1.39912375625629,1.73504190947031,2.4680598049033,2.54633791078818,6.03807360072595,7.64540324246817,8.35839325244593,8.47959840805055,4.35877634027623,4.59385571292016,7.32295393470427,7.54149314400612,2.28028103347649,2.26827116783938,5.76499327703792,16.5107975099504,23.9875267157982,0,7.51014211353314,4.65457007003779,7.14592746918292,0.837063261473815,0,1.57057123192139,0,0,0,12.4637849795822,11.1514624341466,8.44315059943735,4.69434806608824,10.0291571935005,8.78744730937887,7.97162586204562,12.0388322597812,4.31257693094915,1.8456086666351,0,2.35265659399725,4.63066984864705,12.0344044774278,9.7977697532714,39.8563427893408,46.5512061759389,39.2975470173831,6.77689064138264,9.78224275722253,4.94944844504769,2.96659908770092,3.5524005747305,8.38880309451533,9.98967593836042,54.8518049111847,63.5877969542263,59.3116391010897,25.1372866275347,24.9581451275323,55.6108228435891,57.1239007268689,66.1837526359215,25.3266526298594,23.4944702076745,23.6554061214615,39.434000031328,40.0715878978554,23.962015045611,26.5223849051312,21.9477417912355,25.2117108831737,25.6326869362091,22.4947255662583,37.839087502536,5.90664307998836,9.74873125377533,15.6526823898906,2.58127163094416,9.51959867190851,3.2382191498269,7.79731700937203,4.03224198387602,3.5111105032938,6.64678258054425,4.1565760736459,4.94675404314476,20.5631392873954,10.2661181931454,10.1922095882658,21.3320010945999,2.81438353314578,3.04031838570118,7.07734223020697,3.19714863213368,6.21450920753212,11.1331604298619,13.3583701609925,9.13396434936424,14.2981608298756,14.6200961336044,12.6995803706561,11.0586600370114,3.21353458054686,7.51916655983541,3.5384422077995,8.08834249737046,5.74187947997023,5.33362778448744,0,18.1524094147159,18.0124167859571,1.53274233125155,5.03223522924865,5.39912457894067,2.41433431438823,23.0677584683427,16.9275223042892,54.1570257606446,22.7709859451882,23.0143911597297,22.648896856992,28.8789448260609,10.2857757488819,3.35898820647251,2.52722758433675,5.89237196482127,15.8746940414499,13.104419952708,14.2249082546226,11.4535661555143,11.7022778540284,11.1458936647819,14.8048724804372,9.8307280880826,15.3053274982318,15.5066985737612,17.4191612922309,17.7548543266336,13.6243152120543,11.1440693287093,13.9931852757402,13.5343301436575,2.80885274925294,3.08817488537658,3.12579849335152,9.32065976409758,7.27030785941398,7.20248245844059,8.75955521665278,7.47704080640135,6.94202007993202,5.34828072925938,6.43856163359086,3.73649095574942,8.06343264576054,2.62667942526552,4.45878452502207,4.5321996101853,4.61055242111206,4.96563749413376,25.0245038791311,49.8058323915737,0.330418782983798,2.64450566663544,18.7693660471006,12.7730169523241,10.4382643670896,10.4875432804138,6.67134131534611,5.51654315726422,3.32170343081158,4.6115707322723,4.52403375840485,5.37182474511107,3.70431765526328,0.898819408654221,4.10662294761919,3.38540164532424,11.569741958138,11.7675967988021,10.1436962105772,8.5533557695032,12.412959178728,7.71494018793504,7.3986748435381,4.87113488332687,5.96595165797224,4.68909222902842,1.48226313543574,4.67166296005063,7.27268281918851,3.37293168577281,3.44862206360455,3.37648023653384,3.31013607315846,3.16465751195892,2.7562988551756,3.84385978463314,4.31304619582064,5.58211421502755,5.30464044294753,4.54641980304801,3.22915344339442,0.964887042726734,5.72734889516475,11.9379589415405,12.385338209594,12.3913912615887,11.4998221661366,5.69521275302174,6.9032655856944,5.26860849216057,8.51229778173431,5.53661724121937,9.08892181347676,8.52089236521838,8.63424909329478,5.20736610893442,6.03165135757089,4.89515115436839,14.2611639175521,16.5562047782839,31.1468144576316,33.6397540519623,15.5738198107842,3.28212205365685,11.9893123378178,13.6653560503823,17.2338718186239,14.8160654730582,14.2591151412732,20.0984336860071,15.382806663646,14.6127928955656,10.6727700045561,14.7807805554031,10.3616262202036,17.9846259703928,11.2392001953967,9.89820737835213,2.65490276679926,12.1390318077491,9.37203026590728,7.92141334974772,6.79194353625777,8.30074899448604,5.42699415653264,11.6330793432802,9.26893183800275,6.32073515871632,1.05418608574999,8.25084345985495,14.9793426531667,17.1058039329745,17.9808570458029,13.7175702420219,13.6551979904551,14.2695054081656,17.4421961838248,9.43841342255258,6.10146440965647,11.0152676849186,3.96951116498931,9.39851641766436,10.172258881842,8.50412241486998,9.31104283224465,9.52017218521355,2.33184669303881,31.1514507377656,4.27177201994632,10.3193433981611,5.18544676635193,4.52084296811258,2.1871076435364,3.20289442489132,5.77926661979108,5.03825228365169,3.73139929271944,4.77335309007557,14.8677916983134,13.0124458961183,12.7446302169725,13.7998275369549,8.51613998610093,5.79916689454729,7.02554373665355,4.711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| ||
|short_description=p1@Tbc1d14 | |short_description=p1@Tbc1d14 | ||
}} | }} |
Latest revision as of 00:11, 26 September 2015
Short description: | p1@Tbc1d14 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tbc1d14_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_ENSMUST00000141017, ENSMUST00000141626, ENSMUST00000150813_5end |
EntrezGene: | Tbc1d14 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.24e-17 | 33 |
neuronal stem cell | 4.24e-17 | 33 |
neuroblast | 4.24e-17 | 33 |
electrically signaling cell | 4.24e-17 | 33 |
electrically responsive cell | 1.25e-15 | 39 |
electrically active cell | 1.25e-15 | 39 |
CNS neuron (sensu Vertebrata) | 4.20e-15 | 23 |
neuroblast (sensu Vertebrata) | 4.20e-15 | 23 |
ectodermal cell | 1.11e-13 | 44 |
neurectodermal cell | 1.11e-13 | 44 |
neural cell | 3.24e-13 | 43 |
embryonic cell | 8.10e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.14e-29 | 73 |
nervous system | 1.28e-28 | 75 |
ectoderm-derived structure | 1.31e-27 | 95 |
ectoderm | 1.31e-27 | 95 |
presumptive ectoderm | 1.31e-27 | 95 |
ecto-epithelium | 2.69e-25 | 73 |
neurectoderm | 1.22e-24 | 64 |
neural plate | 1.22e-24 | 64 |
presumptive neural plate | 1.22e-24 | 64 |
regional part of nervous system | 1.63e-24 | 54 |
neural tube | 2.07e-23 | 52 |
neural rod | 2.07e-23 | 52 |
future spinal cord | 2.07e-23 | 52 |
neural keel | 2.07e-23 | 52 |
brain | 5.04e-20 | 47 |
future brain | 5.04e-20 | 47 |
regional part of brain | 1.03e-19 | 46 |
pre-chordal neural plate | 8.07e-19 | 49 |
anterior neural tube | 1.43e-18 | 40 |
structure with developmental contribution from neural crest | 3.75e-18 | 92 |
regional part of forebrain | 4.87e-18 | 39 |
forebrain | 4.87e-18 | 39 |
future forebrain | 4.87e-18 | 39 |
gray matter | 5.61e-18 | 34 |
brain grey matter | 4.22e-15 | 29 |
regional part of telencephalon | 4.22e-15 | 29 |
telencephalon | 4.22e-15 | 29 |
cerebral cortex | 1.19e-10 | 21 |
cerebral hemisphere | 1.19e-10 | 21 |
pallium | 1.19e-10 | 21 |
regional part of cerebral cortex | 3.52e-08 | 17 |