FFCP PHASE1:Mm9::chr17:23966114..23966123,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67673 | |EntrezGene=67673 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3082 | |||
|TSSclassifier=NA | |||
|UniProt=P62869 | |UniProt=P62869 | ||
|association_with_transcript=-38bp_to_NM_026305,uc008atr.1,uc008ats.1_5end | |association_with_transcript=-38bp_to_NM_026305,uc008atr.1,uc008ats.1_5end | ||
|cluster_id=chr17:23966114..23966123,- | |||
|description=CAGE_peak_4_at_Tceb2_5end | |description=CAGE_peak_4_at_Tceb2_5end | ||
|id=chr17:23966114..23966123,- | |id=chr17:23966114..23966123,- | ||
|ontology_enrichment_celltype=CL:0000055!2.93e-25!50;CL:0000221!8.34e-23!44;CL:0000133!8.34e-23!44;CL:0002319!2.29e-22!43;CL:0002321!1.36e-21!70;CL:0000220!1.36e-21!70;CL:0000393!2.18e-18!39;CL:0000211!2.18e-18!39;CL:0000548!8.02e-16!115;CL:0000004!8.02e-16!115;CL:0000255!8.02e-16!115;CL:0002371!1.58e-15!118;CL:0000540!2.00e-15!33;CL:0000047!2.00e-15!33;CL:0000031!2.00e-15!33;CL:0000404!2.00e-15!33;CL:0000144!1.59e-14!121;CL:0000012!1.59e-14!121;CL:0000117!2.08e-13!23;CL:0000337!2.08e-13!23;CL:0000034!2.31e-08!97;CL:0000723!2.62e-08!91;CL:0000048!2.62e-08!91;CL:0000333!5.68e-08!10;CL:0000095!5.68e-08!10;CL:0000243!5.68e-08!10;CL:0000123!5.68e-08!10;CL:0000125!5.68e-08!10;CL:0000030!5.68e-08!10;CL:0000339!5.68e-08!10;CL:0002453!7.40e-07!8 | |ontology_enrichment_celltype=CL:0000055!2.93e-25!50;CL:0000221!8.34e-23!44;CL:0000133!8.34e-23!44;CL:0002319!2.29e-22!43;CL:0002321!1.36e-21!70;CL:0000220!1.36e-21!70;CL:0000393!2.18e-18!39;CL:0000211!2.18e-18!39;CL:0000548!8.02e-16!115;CL:0000004!8.02e-16!115;CL:0000255!8.02e-16!115;CL:0002371!1.58e-15!118;CL:0000540!2.00e-15!33;CL:0000047!2.00e-15!33;CL:0000031!2.00e-15!33;CL:0000404!2.00e-15!33;CL:0000144!1.59e-14!121;CL:0000012!1.59e-14!121;CL:0000117!2.08e-13!23;CL:0000337!2.08e-13!23;CL:0000034!2.31e-08!97;CL:0000723!2.62e-08!91;CL:0000048!2.62e-08!91;CL:0000333!5.68e-08!10;CL:0000095!5.68e-08!10;CL:0000243!5.68e-08!10;CL:0000123!5.68e-08!10;CL:0000125!5.68e-08!10;CL:0000030!5.68e-08!10;CL:0000339!5.68e-08!10;CL:0002453!7.40e-07!8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.02e-28,44;CL:0000133,1.02e-28,44;CL:0002319,3.82e-28,43;CL:0002321,4.34e-27,70;CL:0000393,5.78e-23,39;CL:0000211,5.78e-23,39;CL:0000540,4.30e-19,33;CL:0000047,4.30e-19,33;CL:0000031,4.30e-19,33;CL:0000404,4.30e-19,33;CL:0000117,4.51e-17,23;CL:0000337,4.51e-17,23;CL:0000034,4.44e-11,97;CL:0000723,6.22e-11,91;CL:0000048,6.22e-11,91;CL:0000333,5.87e-10,10;CL:0000095,5.87e-10,10;CL:0000243,5.87e-10,10;CL:0000123,5.87e-10,10;CL:0000125,5.87e-10,10;CL:0000030,5.87e-10,10;CL:0000339,5.87e-10,10;CL:0002453,1.67e-08,8;CL:0000128,9.28e-07,6;CL:0000126,9.28e-07,6;CL:0000127,9.28e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.20e-17!75;UBERON:0001016!4.20e-17!75;UBERON:0001017!5.63e-16!73;UBERON:0005743!5.63e-16!73;UBERON:0004121!7.63e-11!102;UBERON:0000924!7.63e-11!102;UBERON:0006601!7.63e-11!102;UBERON:0001049!5.26e-09!52;UBERON:0005068!5.26e-09!52;UBERON:0006241!5.26e-09!52;UBERON:0007135!5.26e-09!52;UBERON:0002616!8.24e-08!49;UBERON:0002020!2.93e-07!34;UBERON:0000955!3.66e-07!50;UBERON:0006238!3.66e-07!50;UBERON:0000033!5.60e-07!63 | |ontology_enrichment_uberon=UBERON:0000073!4.20e-17!75;UBERON:0001016!4.20e-17!75;UBERON:0001017!5.63e-16!73;UBERON:0005743!5.63e-16!73;UBERON:0004121!7.63e-11!102;UBERON:0000924!7.63e-11!102;UBERON:0006601!7.63e-11!102;UBERON:0001049!5.26e-09!52;UBERON:0005068!5.26e-09!52;UBERON:0006241!5.26e-09!52;UBERON:0007135!5.26e-09!52;UBERON:0002616!8.24e-08!49;UBERON:0002020!2.93e-07!34;UBERON:0000955!3.66e-07!50;UBERON:0006238!3.66e-07!50;UBERON:0000033!5.60e-07!63 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.27e-18,75;UBERON:0001017,5.38e-17,73;UBERON:0004121,7.29e-15,95;UBERON:0000924,7.29e-15,95;UBERON:0006601,7.29e-15,95;UBERON:0000073,9.31e-10,54;UBERON:0001049,1.78e-08,52;UBERON:0005068,1.78e-08,52;UBERON:0006241,1.78e-08,52;UBERON:0007135,1.78e-08,52;UBERON:0002346,2.94e-08,64;UBERON:0003075,2.94e-08,64;UBERON:0007284,2.94e-08,64;UBERON:0002020,3.38e-08,34;UBERON:0010314,1.56e-07,92;UBERON:0010371,6.69e-07,73 | |||
|phase1_expression=2.88267924788629,2.79180326111489,3.63999391511629,0.30246421130683,0,1.51091344720701,0.700837921786577,0.774739940649458,0,0.468129052643987,0.34243593645101,1.11681022593471,0.171200729931206,0.874204024189974,0,0.404950534779652,0,0.315462165358238,0.411343300817216,0.42438965179803,3.91199134694921,0.695036658406197,1.30599894569468,1.91990907352088,2.75291137280604,2.8711598205751,4.30761996159075,2.15471232685889,1.52018735565099,0.756090389279792,3.54768817048488,0.635030673459631,0,0,0.866554859253824,1.32987716286794,0.612508068787107,0.418531630736908,1.5626706890476,0.523523743973798,0,0,0.485510353031154,3.27331726736501,4.66333883609767,6.79122982998222,15.6478268869608,13.2995345392072,15.378032791413,11.0825042472342,8.11921245427103,14.3752564364972,0.671130424230945,0,0,5.91696702882678,2.0057340795713,4.12537673821954,7.48570905180512,4.23192783417626,5.70448263155561,11.8595586224196,11.5608323494448,4.04954872776629,4.94433181283487,5.6838409195688,14.081205194365,12.2949857702897,3.83651565541367,3.78016627328734,4.20649922702764,7.9982275633065,5.07997644188711,3.91970557487853,4.60058260887535,4.5960939330501,6.60695285996332,3.83062014255563,4.45458946443106,6.06676923558892,5.12330804173494,8.85552729946492,5.862842979029,12.9435400307286,5.19514042441154,6.18720029494702,4.8406371471695,6.89677949553612,5.45228591998925,6.8014404096107,0.579728977403356,0.860423876981386,0.679971333707751,0.539703191637817,0.649776417447669,0,1.54488862144927,5.11290967734173,3.89679006904303,6.00677276667578,3.52108549441701,1.28326477414318,5.09610479413291,0,2.59789249213457,1.52015919285059,2.02209778005913,1.25602267690966,0.258937883647172,0.148442139064825,0.693941307064543,0.304465478312141,0.230615497256059,0.904335843315735,0.352766121407114,0.753999547978053,1.23597483867187,0.289198713839823,0,0.485300549842228,0,0.484875253135222,0,0.292780797011547,1.04723353406728,0.766371165625774,0.599075622529601,0.599902730993408,0.762421362438388,1.64769703345305,1.37250180845588,1.63350657746724,1.21677024134594,0.511430914660661,2.70124457927428,0.648965052271031,0.509196819251581,0.124406970610093,1.26361379216837,0.210441855886474,0.520481771850815,1.37941262660084,1.0803727788321,1.05493372485001,0.680364991513279,0.2562274405697,0.374806898238915,1.29351685369508,0.862271971731369,1.32374256117473,0.527853372491847,1.97276159184817,1.11218899690239,1.39300866608867,0.61734640922383,0.59710280045548,0.702213187313235,1.02939162845886,1.42081749697796,1.65700618028402,1.40715635988658,1.2604344302271,0.473489471170421,0.787056926989615,1.3884040159864,1.39520366850245,1.3413670069981,0.934122738937356,0.658239399653922,0.492502392237286,0.648550476366846,1.02339991197733,0.439100230582101,0.402619256281115,0.210289948564127,0.617427674275707,0,1.58670339998127,0.426576501070468,0.928946687441754,0.644337306610467,0.403367049246685,1.11189021922435,0.380451252225118,0.474529061544512,0.164698954724011,0.502670417600539,0.795825888164603,0.779856348476481,0,0.432276099749388,0.199141273254367,0.948339504765408,0.913988100877831,1.1270773567308,0.203651327845314,0.387904974335251,0.561086559122548,0.505892296994058,0.295220295959204,0.470996183524124,0.246794327843601,0.296452627087149,0.166845105716094,0.589676985339609,0.224862112384854,0.202860121388503,0.482354319504834,0,0.287696137450811,0.324270453550071,0,0,0,0.312037673114561,0.505157755894224,0.179397413521912,0.482443521363367,0.184753190166605,1.32643988239339,0.977789858652155,0.848725428875941,1.17345124144251,1.00503754465089,0.952174563544055,0,0.472905432318573,0.221464689648775,0.318909537314974,0.81931657357869,0,0.578596234326046,0,0,0.983528546038072,0,0.963303539926752,0.937693492737625,4.42624352517024,0.504941854408746,3.78609863299508,2.34263246577983,1.07711698866399,2.15071918157297,1.11399337041197,2.26461224631066,2.83367491172426,2.63030272120181,0.790575555893047,0,0.709700426041343,0.534196811001766,0.81443479676788,0.329940245945071,0,0.728341908464944,1.51161778482376,0.943025398779491,1.18120757152309,0.922305443831782,0.258428293168221,0.363533729477506,0.712994756769443,0,0,0,0.680879211507576,1.08036656418786,1.55230420539305,1.71469628025274,0.886701168211368,1.07021290561242,0.987294123612726,1.2178597964584,2.3467170806371,0.63549621259146,0.220528398054962,0.16488625294148,0.484393280087717,0.241251699712623,0.119372344003136,0,1.1659233465194,1.29797711407357,0.170870880797853,1.23832120777933,0.555583582109135,0.188368457004691,0.136694227721025,0.457556346413045,0,0.419854356970974,0.829199842826543,0,0.949007980743406,0.813277868507395,0.432021363287205,1.04544148007234,0.87345025498471,0.269728692769641,0.41326727862668,0.26175594198403,0.129614973291793,1.24267862617385,8.45539408026285,1.49516546043979,0.827292452285488,0.972255941720238,0.516639293910924,1.01373675294467,0.704143431874524,0.781226309063701,0.838874755405687,3.14059357073808,2.30424005006292,0.316011120628178,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| ||
|short_description=p4@Tceb2 | |short_description=p4@Tceb2 | ||
}} | }} |
Latest revision as of 01:10, 26 September 2015
Short description: | p4@Tceb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Tceb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:3082 |
Association with transcript: | -38bp_to_NM_026305, uc008atr.1, uc008ats.1_5end |
EntrezGene: | Tceb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.02e-28 | 44 |
neurectodermal cell | 1.02e-28 | 44 |
neural cell | 3.82e-28 | 43 |
embryonic cell | 4.34e-27 | 70 |
electrically responsive cell | 5.78e-23 | 39 |
electrically active cell | 5.78e-23 | 39 |
neuron | 4.30e-19 | 33 |
neuronal stem cell | 4.30e-19 | 33 |
neuroblast | 4.30e-19 | 33 |
electrically signaling cell | 4.30e-19 | 33 |
CNS neuron (sensu Vertebrata) | 4.51e-17 | 23 |
neuroblast (sensu Vertebrata) | 4.51e-17 | 23 |
stem cell | 4.44e-11 | 97 |
somatic stem cell | 6.22e-11 | 91 |
multi fate stem cell | 6.22e-11 | 91 |
migratory neural crest cell | 5.87e-10 | 10 |
neuron associated cell | 5.87e-10 | 10 |
glial cell (sensu Vertebrata) | 5.87e-10 | 10 |
neuron associated cell (sensu Vertebrata) | 5.87e-10 | 10 |
glial cell | 5.87e-10 | 10 |
glioblast | 5.87e-10 | 10 |
glioblast (sensu Vertebrata) | 5.87e-10 | 10 |
oligodendrocyte precursor cell | 1.67e-08 | 8 |
oligodendrocyte | 9.28e-07 | 6 |
macroglial cell | 9.28e-07 | 6 |
astrocyte | 9.28e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.27e-18 | 75 |
central nervous system | 5.38e-17 | 73 |
ectoderm-derived structure | 7.29e-15 | 95 |
ectoderm | 7.29e-15 | 95 |
presumptive ectoderm | 7.29e-15 | 95 |
regional part of nervous system | 9.31e-10 | 54 |
neural tube | 1.78e-08 | 52 |
neural rod | 1.78e-08 | 52 |
future spinal cord | 1.78e-08 | 52 |
neural keel | 1.78e-08 | 52 |
neurectoderm | 2.94e-08 | 64 |
neural plate | 2.94e-08 | 64 |
presumptive neural plate | 2.94e-08 | 64 |
gray matter | 3.38e-08 | 34 |
structure with developmental contribution from neural crest | 1.56e-07 | 92 |
ecto-epithelium | 6.69e-07 | 73 |