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FFCP PHASE1:Mm9::chr17:27693546..27693557,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr17:27693546..27693557,+
|DHSsupport=NA
|short_description=p6@Hmga1
|DPIdataset=NA
|description=CAGE_peak_6_at_Hmga1_5end
|association_with_transcript=0bp_to_NM_001166537,NM_016660,uc008bpa.2,uc008bpc.2_5end
|EntrezGene=15361
|EntrezGene=15361
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=P17095,Q3TVP0,Q566K0
|UniProt=P17095,Q3TVP0,Q566K0
|association_with_transcript=0bp_to_NM_001166537,NM_016660,uc008bpa.2,uc008bpc.2_5end
|cluster_id=chr17:27693546..27693557,+
|description=CAGE_peak_6_at_Hmga1_5end
|id=chr17:27693546..27693557,+
|ontology_enrichment_celltype=CL:0000117!3.55e-14!23;CL:0000337!3.55e-14!23;CL:0000540!6.19e-07!33;CL:0000047!6.19e-07!33;CL:0000031!6.19e-07!33;CL:0000404!6.19e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,3.45e-14,23;CL:0000337,3.45e-14,23;CL:0000540,6.17e-07,33;CL:0000047,6.17e-07,33;CL:0000031,6.17e-07,33;CL:0000404,6.17e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.01e-13!52;UBERON:0005068!1.01e-13!52;UBERON:0006241!1.01e-13!52;UBERON:0007135!1.01e-13!52;UBERON:0000955!1.01e-12!50;UBERON:0006238!1.01e-12!50;UBERON:0002020!2.63e-12!34;UBERON:0002616!2.85e-12!49;UBERON:0000073!4.27e-12!75;UBERON:0001016!4.27e-12!75;UBERON:0001017!9.68e-12!73;UBERON:0005743!9.68e-12!73;UBERON:0002346!2.85e-10!71;UBERON:0003075!2.85e-10!71;UBERON:0007284!2.85e-10!71;UBERON:0000033!4.42e-10!63;UBERON:0002791!9.71e-10!29;UBERON:0003528!9.71e-10!29;UBERON:0001893!9.71e-10!29;UBERON:0003080!1.11e-09!40;UBERON:0003056!2.21e-09!49;UBERON:0004121!3.06e-09!102;UBERON:0000924!3.06e-09!102;UBERON:0006601!3.06e-09!102;UBERON:0002780!3.98e-09!39;UBERON:0001890!3.98e-09!39;UBERON:0006240!3.98e-09!39;UBERON:0007811!7.16e-08!86;UBERON:0000153!2.43e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.66e-15,54;UBERON:0001049,1.01e-13,52;UBERON:0005068,1.01e-13,52;UBERON:0006241,1.01e-13,52;UBERON:0007135,1.01e-13,52;UBERON:0002020,2.57e-12,34;UBERON:0001016,4.27e-12,75;UBERON:0001017,9.69e-12,73;UBERON:0002346,1.38e-11,64;UBERON:0003075,1.38e-11,64;UBERON:0007284,1.38e-11,64;UBERON:0000955,4.02e-11,47;UBERON:0006238,4.02e-11,47;UBERON:0002616,1.10e-10,46;UBERON:0004121,5.25e-10,95;UBERON:0000924,5.25e-10,95;UBERON:0006601,5.25e-10,95;UBERON:0003528,9.53e-10,29;UBERON:0002791,9.53e-10,29;UBERON:0001893,9.53e-10,29;UBERON:0003080,1.09e-09,40;UBERON:0010371,2.13e-09,73;UBERON:0003056,2.17e-09,49;UBERON:0002780,3.92e-09,39;UBERON:0001890,3.92e-09,39;UBERON:0006240,3.92e-09,39
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75205191478,1.30877970992015,3.75883422546199,0.621339313086926,0.56369293868419,2.39226473670366,3.80554528051325,1.94451188344048,1.54991788173277,1.35164900392623,0.938857909166032,3.6457227756306,6.50127935439407,3.14059357073808,2.01621004380506,2.21207784439725,3.85177909051312,3.3894615864393,4.02754551231165,2.8644271306797,2.78153896693771,3.00488623799922,4.13530676088816,2.42319479875554,3.27689268616499,2.01652370273681,2.53390489923356,3.17499077413087,2.10378423926824,1.58711268530648,5.10567692760349,7.98453323824334,5.54019234001459,3.09103350451505,1.12609485270709,0.549454872801795,2.35805216986972,0,3.3885110557024,3.68260189205742,2.29158205375759,2.23409137046794,4.11049511862385,6.7985450765073,4.72515750162264,4.5032120322422,6.34399372577886,3.10656187051092,4.8780053364563,3.59122386060928,3.07320490357441,3.16038732188782,3.14419743941973,2.5738091183002,2.44471400581777,2.06035057238894,2.24643446714271,2.27427490587418,2.78827229879264,1.88626341386076,2.62196220915671,2.94515701062399,2.41228969613576,0.476293691283074,2.20180219295225,3.47236596834669,1.64834360321323,1.61918812147837,1.71434626192708,1.06485483695602,1.1921809497366,2.47088908274958,1.50575008664529,1.52306294205018,2.74391959309159,3.94604567156764,1.90125759384206,1.12228454331548,2.60997039873183,2.9551344712669,1.63692417267876,2.47898945897546,1.92906610981141,4.24677982494508,1.16965804222704,3.43793686477277,2.67803664896381,2.64709702943419,1.15933917810211
|phase1_expression=1.28119077683835,2.09385244583617,3.18499467572675,0.30246421130683,0.500895729946347,3.86122325397347,3.97141489012394,2.06597317506522,1.54867594366833,1.17032263160997,1.88339765048055,1.43589886191606,2.39681021903688,2.53519167015092,1.99865857089398,2.63217847606774,2.09868563438444,1.10411757875383,1.7824876368746,1.27316895539409,3.82694805679814,2.28369187762036,2.35079810225042,1.75991665072747,2.06468352960453,2.8711598205751,0,2.80112602491656,1.71021077510736,2.01624103807945,1.77384408524244,0.635030673459631,2.46025915033828,0,3.75507105676657,2.32728503501889,2.24586291888606,1.25559489221072,2.3440060335714,1.0470474879476,1.17646297606203,2.73218193983378,0,3.39921408534059,3.34543873024398,0.917733760808408,3.9119567217402,0.65407546914134,1.5378032791413,1.74986909166855,4.4795654920116,1.43752564364972,0.671130424230945,1.45072428402269,0.336093799142464,1.54355661621568,0.85960031981627,2.06268836910977,5.86717736492834,10.0508286061686,5.70448263155561,2.03306719241479,5.33576877666684,8.54904731417329,14.8329954385046,9.2362414942993,2.39680088414724,1.92109152660777,7.05089363697648,7.2903206699113,6.09942387919008,5.99867067247988,4.8591079009355,7.4719387521122,7.66763768145891,5.51531271966013,5.50579404996943,6.12899222808901,9.36999852863085,6.85808696197008,6.58711033937349,4.16730696445408,9.77140496504833,5.06486349028512,5.34793867218835,7.07108605136802,5.26775218956681,5.59198337475902,2.72614295999463,3.92972112555285,1.44932244350839,0.860423876981386,1.3599426674155,1.07940638327563,1.29955283489534,1.34408066129201,1.96622188184453,0.852151612890289,0.259786004602869,0.70667914902068,1.40843419776681,0,0,0,1.94841936910093,1.26679932737549,3.53867111510348,0.91347103775248,1.03575153458869,2.22663208597237,2.77576522825817,1.52232739156071,2.7673859670727,2.41156224884196,2.11659672844269,1.38233250462643,2.96633961281249,1.87979163995885,3.5384422077995,2.91180329905337,1.76673214768315,1.45462575940567,3.72783522436244,4.68449275218475,2.72280718857492,1.53274233125155,1.55759661857696,2.99951365496704,1.65191295194984,8.38827580667007,2.74500361691176,7.66491547888473,4.34560800480691,4.60287823194595,7.68815764870372,4.86723789203273,1.32391173005411,1.99051152976149,1.76905930903572,2.52530227063769,2.73252930221678,3.67843367093557,2.34080768746954,1.65775299619287,2.58538696775046,2.94661556655154,2.71735001223214,3.10444044886819,3.44908788692548,2.83659120251729,3.16712023495108,2.84954452155847,1.66828349535359,1.74126083261083,1.85203922767149,3.78165106955137,1.40442637462647,0.51469581422943,1.98914449576915,4.14251545071004,2.34526059981096,2.52086886045421,2.60419209143731,1.37734962223183,1.3884040159864,1.86027155800326,1.3413670069981,1.40118410840603,1.15191894939436,1.47750717671186,3.24275238183423,3.36259971078264,3.07370161407471,2.54992195644706,3.15434922846191,4.42489833230923,0.991256348951394,3.43785736662608,4.05247676016945,4.18026009348789,2.83508414908605,3.42861991859682,3.7804267453628,3.42406127002606,2.84717436926707,4.44687177754829,3.77002813200404,7.75930240960488,4.48417400373976,1.79763881730844,4.10662294761919,2.58883655230677,4.55202962287396,2.39921876480431,3.38123207019241,1.83286195060783,1.74557238450863,1.82353131714828,2.40298841072178,1.47610147979602,1.56998727841375,1.60416313098341,1.1858105083486,2.50267658574141,2.35870794135844,2.47348323623339,3.44862206360455,1.92941727801933,1.52775511068852,2.01387296215567,2.2698931748505,1.64736847912849,0,4.46569137202204,2.80833905803104,1.51547326768267,2.33216637578486,2.8946611281802,3.69506380333209,3.22135400009824,1.46668478797823,2.8856664581782,1.87752198630802,2.01007508930179,2.85652369063216,2.92700471786698,2.04925687338048,2.43611158613652,1.43509291791738,2.94953966488328,1.55416483679306,3.03763023021174,4.52373851817817,3.80733978673097,0.983528546038072,1.10374698521893,8.83028244932856,9.02529986759964,2.62295912602681,3.28212205365685,1.57754109708128,0.390438744296638,1.50796378412959,1.19484398976276,2.67358408898873,1.13230612315533,0.809621403349789,2.63030272120181,1.97643888973262,4.81981974632711,0.99358059645788,1.42452482933804,1.62886959353576,0.989820737835213,3.98235415019888,3.15614827001476,0.906970670894253,1.13163047853539,1.47650946440386,0.307435147943927,1.55056975900933,1.45413491791002,2.85197902707777,1.26414703174326,1.05418608574999,0,3.06395645178409,1.98067203434441,1.03486947026204,1.92903331528433,1.77340233642274,4.28085162244969,2.96188237083818,2.74018454203139,4.22409074514679,1.27099242518292,0.661585194164886,2.30840754118072,3.55221738730992,2.5934557719107,2.74556391207214,2.46211349617592,2.62332752966866,6.86073617438886,1.70870880797853,1.23832120777933,2.03713980106683,0.753473828018764,2.46049609897845,1.37266903923914,1.35982743995084,0.979660166265606,1.93479963326193,4.77335309007557,2.53068794864908,1.42323626988794,2.05210147561422,2.50905955217362,2.18362563746178,2.15782954215713,3.63675205191478,1.30877970992015,3.75883422546199,0.621339313086926,0.56369293868419,2.39226473670366,3.80554528051325,1.94451188344048,1.54991788173277,1.35164900392623,0.938857909166032,3.6457227756306,6.50127935439407,3.14059357073808,2.01621004380506,2.21207784439725,3.85177909051312,3.3894615864393,4.02754551231165,2.8644271306797,2.78153896693771,3.00488623799922,4.13530676088816,2.42319479875554,3.27689268616499,2.01652370273681,2.53390489923356,3.17499077413087,2.10378423926824,1.58711268530648,5.10567692760349,7.98453323824334,5.54019234001459,3.09103350451505,1.12609485270709,0.549454872801795,2.35805216986972,0,3.3885110557024,3.68260189205742,2.29158205375759,2.23409137046794,4.11049511862385,6.7985450765073,4.72515750162264,4.5032120322422,6.34399372577886,3.10656187051092,4.8780053364563,3.59122386060928,3.07320490357441,3.16038732188782,3.14419743941973,2.5738091183002,2.44471400581777,2.06035057238894,2.24643446714271,2.27427490587418,2.78827229879264,1.88626341386076,2.62196220915671,2.94515701062399,2.41228969613576,0.476293691283074,2.20180219295225,3.47236596834669,1.64834360321323,1.61918812147837,1.71434626192708,1.06485483695602,1.1921809497366,2.47088908274958,1.50575008664529,1.52306294205018,2.74391959309159,3.94604567156764,1.90125759384206,1.12228454331548,2.60997039873183,2.9551344712669,1.63692417267876,2.47898945897546,1.92906610981141,4.24677982494508,1.16965804222704,3.43793686477277,2.67803664896381,2.64709702943419,1.15933917810211
|short_description=p6@Hmga1
}}
}}

Latest revision as of 03:38, 26 September 2015

Short description:p6@Hmga1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Hmga1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_NM_001166537, NM_016660, uc008bpa.2, uc008bpc.2_5end
EntrezGene:Hmga1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Hmga1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.86
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.97
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.44
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.40
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.54
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.63
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.78
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.83
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.35
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.06
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I22.80
Ileum epithelium, pool1.CNhs13199.10252-104B91.71
Ileum epithelium, pool2.CNhs13232.10253-104C12.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.76
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.35
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.48
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C35.87
Mouse Granule cells, donor2.CNhs12357.11731-123E310.05
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C78.55
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E714.83
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D29.24
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.05
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.29
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.37
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.86
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.59
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.77
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.07
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.59
Mouse Schwann, donor1.CNhs12507.11728-123D92.73
Mouse Schwann, donor2.CNhs12573.11746-123F93.93
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D72.23
adrenal gland, embryo E14.CNhs11038.406-44C52.78
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F52.41
adrenal gland, neonate N00.CNhs11191.1311-23C12.12
adrenal gland, neonate N25.CNhs11223.1377-27I31.38
amnion, adult pregnant day17.5.CNhs10488.583-22A82.97
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F52.91
bone (os femoris), neonate N16.CNhs11225.1525-43A61.77
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B24.68
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.56
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.65
corpora quadrigemina, adult.CNhs10501.16-22A48.39
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F17.66
cortex, adult.CNhs10473.12-14D54.35
cortex, neonate N30.CNhs11107.1392-42F24.60
diencephalon, adult.CNhs10482.20-12F27.69
diencephalon, neonate N30.CNhs11201.1388-42B24.87
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.99
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C62.73
eyeball, embryo E14.CNhs10521.399-16E23.68
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C62.59
eyeball, neonate N01.CNhs11140.1532-43E72.95
eyeball, neonate N02.CNhs11205.1551-44G82.72
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E23.45
forelimb, embryo E12.CNhs10600.359-14H22.84
forelimb, embryo E13.CNhs10589.384-1E23.17
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I63.78
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E94.14
heart, embryo E12.CNhs11015.353-12F52.35
heart, embryo E13.CNhs11013.376-3I92.52
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E31.40
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G13.24
heart, neonate N20.CNhs11127.821-26I63.36
heart, neonate N25.CNhs11196.1351-25D33.07
heart, neonate N30.CNhs11202.1390-42D22.55
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G14.42
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A33.44
intestine, embryo E12.CNhs11019.1251-16I54.05
intestine, embryo E13.CNhs11010.381-16D54.18
intestine, embryo E15.CNhs10602.976-16D82.84
intestine, embryo E16.CNhs10585.463-22H43.43
intestine, embryo E17.CNhs10582.482-18D33.78
intestine, embryo E18.CNhs10526.1289-20F73.42
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E94.45
intestine, neonate N06.CNhs11102.688-20B83.77
intestine, neonate N07.CNhs11095.720-20F27.76
intestine, neonate N10.CNhs11098.755-23A54.48
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E34.11
intestine, neonate N30.CNhs11131.1384-42G12.59
kidney, embryo E14.CNhs10606.411-4I94.55
kidney, embryo E15.CNhs10997.434-16F82.40
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G71.82
kidney, neonate N10.CNhs11206.758-6D52.40
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H11.60
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F82.50
liver, embryo E13.CNhs10524.378-3H62.36
liver, embryo E14.CNhs10594.409-16E12.47
liver, embryo E15.CNhs10520.433-16D73.45
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F42.27
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H24.47
liver, neonate N10.CNhs11115.751-24B92.81
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H12.33
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B13.70
lung, embryo E12.CNhs10522.354-16G23.22
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C52.89
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C62.93
lung, neonate N06.CNhs11212.683-20E52.05
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A42.95
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H23.04
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C28.83
medulla oblongata, neonate N30.CNhs11200.1396-42A39.03
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.62
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.28
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I94.82
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F43.16
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F64.28
pituitary gland, embryo E17.CNhs11039.1265-44F52.96
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I74.22
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C32.31
skin, neonate N00.CNhs11124.650-25G43.55
skin, neonate N03.CNhs11215.662-22H32.59
skin, neonate N06.CNhs11097.693-20I52.75
skin, neonate N10.CNhs11108.762-6C42.46
small intestine, neonate N16.CNhs11114.790-21I12.62
spinal cord, adult.CNhs10505.24-13C96.86
spleen, adult.CNhs10465.25-2G21.71
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H12.46
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.93
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E32.53
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D42.05
stomach, embryo E17.CNhs11006.1035-18D52.51
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A93.64
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I13.76
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F52.39
testis, embryo E15.CNhs11034.443-27C53.81
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I51.55
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I43.65
testis, neonate N10.CNhs11204.763-44D96.50
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I43.85
thymus, embryo E15.CNhs11005.430-45I23.39
thymus, embryo E16.CNhs11002.456-26C54.03
thymus, embryo E17.CNhs10581.478-18C12.86
thymus, embryo E18.CNhs10595.1273-19G42.78
thymus, neonate N02.CNhs11181.1541-43F83.00
thymus, neonate N03.CNhs11137.2104-43C74.14
thymus, neonate N06.CNhs11197.681-26C42.42
thymus, neonate N07.CNhs11211.713-19D33.28
thymus, neonate N10.CNhs11194.748-24E42.02
thymus, neonate N20.CNhs11186.820-7A22.53
thymus, neonate N25.CNhs11125.1362-25G73.17
thymus, neonate N30.CNhs11132.1393-42G22.10
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F77.98
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.54
urinary bladder, adult.CNhs10481.879-12E43.09
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D52.36
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.34
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I84.88
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H23.07
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F22.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.95
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.41
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C23.44
whole body, neonate N01.CNhs10576.659-23C62.68
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.45e-1423
neuroblast (sensu Vertebrata)3.45e-1423
neuron6.17e-0733
neuronal stem cell6.17e-0733
neuroblast6.17e-0733
electrically signaling cell6.17e-0733

Uber anatomy
Ontology termp-valuen
regional part of nervous system7.66e-1554
neural tube1.01e-1352
neural rod1.01e-1352
future spinal cord1.01e-1352
neural keel1.01e-1352
gray matter2.57e-1234
nervous system4.27e-1275
central nervous system9.69e-1273
neurectoderm1.38e-1164
neural plate1.38e-1164
presumptive neural plate1.38e-1164
brain4.02e-1147
future brain4.02e-1147
regional part of brain1.10e-1046
ectoderm-derived structure5.25e-1095
ectoderm5.25e-1095
presumptive ectoderm5.25e-1095
brain grey matter9.53e-1029
regional part of telencephalon9.53e-1029
telencephalon9.53e-1029
anterior neural tube1.09e-0940
ecto-epithelium2.13e-0973
pre-chordal neural plate2.17e-0949
regional part of forebrain3.92e-0939
forebrain3.92e-0939
future forebrain3.92e-0939
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