FFCP PHASE1:Mm9::chr5:77086698..77086747,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=320827 | |EntrezGene=320827 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |MCL_coexpression_id=22 | ||
|TSSclassifier=NA | |||
|UniProt=D3Z1J3 | |UniProt=D3Z1J3 | ||
|association_with_transcript=0bp_to_ENSMUST00000125922,ENSMUST00000128112_5end | |association_with_transcript=0bp_to_ENSMUST00000125922,ENSMUST00000128112_5end | ||
|cluster_id=chr5:77086698..77086747,+ | |||
|description=CAGE_peak_1_at_C530008M17Rik_5end | |description=CAGE_peak_1_at_C530008M17Rik_5end | ||
|id=chr5:77086698..77086747,+ | |id=chr5:77086698..77086747,+ | ||
|ontology_enrichment_celltype=CL:0000540!4.48e-20!33;CL:0000047!4.48e-20!33;CL:0000031!4.48e-20!33;CL:0000404!4.48e-20!33;CL:0000117!1.12e-15!23;CL:0000337!1.12e-15!23;CL:0000221!1.13e-15!44;CL:0000133!1.13e-15!44;CL:0002319!1.41e-15!43;CL:0000393!1.40e-13!39;CL:0000211!1.40e-13!39;CL:0000055!1.87e-10!50 | |ontology_enrichment_celltype=CL:0000540!4.48e-20!33;CL:0000047!4.48e-20!33;CL:0000031!4.48e-20!33;CL:0000404!4.48e-20!33;CL:0000117!1.12e-15!23;CL:0000337!1.12e-15!23;CL:0000221!1.13e-15!44;CL:0000133!1.13e-15!44;CL:0002319!1.41e-15!43;CL:0000393!1.40e-13!39;CL:0000211!1.40e-13!39;CL:0000055!1.87e-10!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.47e-20,33;CL:0000047,1.47e-20,33;CL:0000031,1.47e-20,33;CL:0000404,1.47e-20,33;CL:0000117,4.79e-16,23;CL:0000337,4.79e-16,23;CL:0000221,9.09e-16,44;CL:0000133,9.09e-16,44;CL:0002319,1.15e-15,43;CL:0000393,1.16e-13,39;CL:0000211,1.16e-13,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.50e-24!75;UBERON:0001016!1.50e-24!75;UBERON:0001017!2.11e-24!73;UBERON:0005743!2.11e-24!73;UBERON:0004121!1.95e-19!102;UBERON:0000924!1.95e-19!102;UBERON:0006601!1.95e-19!102;UBERON:0002346!1.04e-17!71;UBERON:0003075!1.04e-17!71;UBERON:0007284!1.04e-17!71;UBERON:0001049!5.12e-16!52;UBERON:0005068!5.12e-16!52;UBERON:0006241!5.12e-16!52;UBERON:0007135!5.12e-16!52;UBERON:0000033!9.40e-16!63;UBERON:0003056!2.00e-15!49;UBERON:0002020!3.86e-15!34;UBERON:0000955!9.47e-15!50;UBERON:0006238!9.47e-15!50;UBERON:0002616!2.47e-14!49;UBERON:0003080!3.50e-13!40;UBERON:0002780!9.67e-13!39;UBERON:0001890!9.67e-13!39;UBERON:0006240!9.67e-13!39;UBERON:0002791!3.88e-12!29;UBERON:0003528!3.88e-12!29;UBERON:0001893!3.88e-12!29;UBERON:0000956!8.38e-08!21;UBERON:0001869!8.38e-08!21;UBERON:0000203!8.38e-08!21 | |ontology_enrichment_uberon=UBERON:0000073!1.50e-24!75;UBERON:0001016!1.50e-24!75;UBERON:0001017!2.11e-24!73;UBERON:0005743!2.11e-24!73;UBERON:0004121!1.95e-19!102;UBERON:0000924!1.95e-19!102;UBERON:0006601!1.95e-19!102;UBERON:0002346!1.04e-17!71;UBERON:0003075!1.04e-17!71;UBERON:0007284!1.04e-17!71;UBERON:0001049!5.12e-16!52;UBERON:0005068!5.12e-16!52;UBERON:0006241!5.12e-16!52;UBERON:0007135!5.12e-16!52;UBERON:0000033!9.40e-16!63;UBERON:0003056!2.00e-15!49;UBERON:0002020!3.86e-15!34;UBERON:0000955!9.47e-15!50;UBERON:0006238!9.47e-15!50;UBERON:0002616!2.47e-14!49;UBERON:0003080!3.50e-13!40;UBERON:0002780!9.67e-13!39;UBERON:0001890!9.67e-13!39;UBERON:0006240!9.67e-13!39;UBERON:0002791!3.88e-12!29;UBERON:0003528!3.88e-12!29;UBERON:0001893!3.88e-12!29;UBERON:0000956!8.38e-08!21;UBERON:0001869!8.38e-08!21;UBERON:0000203!8.38e-08!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.15e-25,75;UBERON:0001017,1.02e-24,73;UBERON:0004121,4.64e-21,95;UBERON:0000924,4.64e-21,95;UBERON:0006601,4.64e-21,95;UBERON:0002346,3.90e-20,64;UBERON:0003075,3.90e-20,64;UBERON:0007284,3.90e-20,64;UBERON:0000073,1.90e-17,54;UBERON:0010371,3.58e-16,73;UBERON:0001049,3.90e-16,52;UBERON:0005068,3.90e-16,52;UBERON:0006241,3.90e-16,52;UBERON:0007135,3.90e-16,52;UBERON:0003056,2.96e-15,49;UBERON:0002020,4.95e-15,34;UBERON:0000955,3.61e-13,47;UBERON:0006238,3.61e-13,47;UBERON:0003080,4.36e-13,40;UBERON:0002616,9.36e-13,46;UBERON:0002780,1.23e-12,39;UBERON:0001890,1.23e-12,39;UBERON:0006240,1.23e-12,39;UBERON:0003528,5.65e-12,29;UBERON:0002791,5.65e-12,29;UBERON:0001893,5.65e-12,29;UBERON:0010314,1.01e-10,92;UBERON:0000956,1.42e-07,21;UBERON:0001869,1.42e-07,21;UBERON:0000203,1.42e-07,21 | |||
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| ||
|short_description=p1@C530008M17Rik | |short_description=p1@C530008M17Rik | ||
}} | }} |
Latest revision as of 05:38, 26 September 2015
Short description: | p1@C530008M17Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_C530008M17Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_ENSMUST00000125922, ENSMUST00000128112_5end |
EntrezGene: | C530008M17Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.47e-20 | 33 |
neuronal stem cell | 1.47e-20 | 33 |
neuroblast | 1.47e-20 | 33 |
electrically signaling cell | 1.47e-20 | 33 |
CNS neuron (sensu Vertebrata) | 4.79e-16 | 23 |
neuroblast (sensu Vertebrata) | 4.79e-16 | 23 |
ectodermal cell | 9.09e-16 | 44 |
neurectodermal cell | 9.09e-16 | 44 |
neural cell | 1.15e-15 | 43 |
electrically responsive cell | 1.16e-13 | 39 |
electrically active cell | 1.16e-13 | 39 |
Ontology term | p-value | n |
---|---|---|
nervous system | 7.15e-25 | 75 |
central nervous system | 1.02e-24 | 73 |
ectoderm-derived structure | 4.64e-21 | 95 |
ectoderm | 4.64e-21 | 95 |
presumptive ectoderm | 4.64e-21 | 95 |
neurectoderm | 3.90e-20 | 64 |
neural plate | 3.90e-20 | 64 |
presumptive neural plate | 3.90e-20 | 64 |
regional part of nervous system | 1.90e-17 | 54 |
ecto-epithelium | 3.58e-16 | 73 |
neural tube | 3.90e-16 | 52 |
neural rod | 3.90e-16 | 52 |
future spinal cord | 3.90e-16 | 52 |
neural keel | 3.90e-16 | 52 |
pre-chordal neural plate | 2.96e-15 | 49 |
gray matter | 4.95e-15 | 34 |
brain | 3.61e-13 | 47 |
future brain | 3.61e-13 | 47 |
anterior neural tube | 4.36e-13 | 40 |
regional part of brain | 9.36e-13 | 46 |
regional part of forebrain | 1.23e-12 | 39 |
forebrain | 1.23e-12 | 39 |
future forebrain | 1.23e-12 | 39 |
brain grey matter | 5.65e-12 | 29 |
regional part of telencephalon | 5.65e-12 | 29 |
telencephalon | 5.65e-12 | 29 |
structure with developmental contribution from neural crest | 1.01e-10 | 92 |
cerebral cortex | 1.42e-07 | 21 |
cerebral hemisphere | 1.42e-07 | 21 |
pallium | 1.42e-07 | 21 |