FFCP PHASE1:Mm9::chr12:106692041..106692129,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=268595 | |EntrezGene=268595 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |MCL_coexpression_id=22 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NM_001252508_5end | |association_with_transcript=0bp_to_NM_001252508_5end | ||
|cluster_id=chr12:106692041..106692129,+ | |||
|description=CAGE_peak_1_at_D430019H16Rik_5end | |description=CAGE_peak_1_at_D430019H16Rik_5end | ||
|id=chr12:106692041..106692129,+ | |id=chr12:106692041..106692129,+ | ||
|ontology_enrichment_celltype=CL:0000117!6.60e-14!23;CL:0000337!6.60e-14!23;CL:0000540!1.37e-13!33;CL:0000047!1.37e-13!33;CL:0000031!1.37e-13!33;CL:0000404!1.37e-13!33;CL:0002319!2.21e-09!43;CL:0000221!2.30e-09!44;CL:0000133!2.30e-09!44;CL:0000393!6.80e-09!39;CL:0000211!6.80e-09!39 | |ontology_enrichment_celltype=CL:0000117!6.60e-14!23;CL:0000337!6.60e-14!23;CL:0000540!1.37e-13!33;CL:0000047!1.37e-13!33;CL:0000031!1.37e-13!33;CL:0000404!1.37e-13!33;CL:0002319!2.21e-09!43;CL:0000221!2.30e-09!44;CL:0000133!2.30e-09!44;CL:0000393!6.80e-09!39;CL:0000211!6.80e-09!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.50e-14,23;CL:0000337,3.50e-14,23;CL:0000540,7.40e-14,33;CL:0000047,7.40e-14,33;CL:0000031,7.40e-14,33;CL:0000404,7.40e-14,33;CL:0002319,4.67e-09,43;CL:0000221,4.82e-09,44;CL:0000133,4.82e-09,44;CL:0000393,9.73e-09,39;CL:0000211,9.73e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.49e-22!73;UBERON:0005743!1.49e-22!73;UBERON:0000073!4.76e-22!75;UBERON:0001016!4.76e-22!75;UBERON:0002346!5.31e-22!71;UBERON:0003075!5.31e-22!71;UBERON:0007284!5.31e-22!71;UBERON:0003056!1.38e-20!49;UBERON:0004121!1.10e-19!102;UBERON:0000924!1.10e-19!102;UBERON:0006601!1.10e-19!102;UBERON:0001049!1.89e-19!52;UBERON:0005068!1.89e-19!52;UBERON:0006241!1.89e-19!52;UBERON:0007135!1.89e-19!52;UBERON:0003080!6.72e-19!40;UBERON:0002780!1.85e-18!39;UBERON:0001890!1.85e-18!39;UBERON:0006240!1.85e-18!39;UBERON:0000033!3.81e-18!63;UBERON:0000955!6.52e-18!50;UBERON:0006238!6.52e-18!50;UBERON:0002020!1.78e-17!34;UBERON:0002616!2.27e-17!49;UBERON:0002791!1.80e-14!29;UBERON:0003528!1.80e-14!29;UBERON:0001893!1.80e-14!29;UBERON:0000956!4.49e-10!21;UBERON:0001869!4.49e-10!21;UBERON:0000203!4.49e-10!21;UBERON:0000468!1.14e-09!333;UBERON:0000153!1.33e-09!94;UBERON:0007811!4.18e-08!86;UBERON:0002619!9.85e-08!17;UBERON:0000922!2.53e-07!328;UBERON:0000479!7.18e-07!349 | |ontology_enrichment_uberon=UBERON:0001017!1.49e-22!73;UBERON:0005743!1.49e-22!73;UBERON:0000073!4.76e-22!75;UBERON:0001016!4.76e-22!75;UBERON:0002346!5.31e-22!71;UBERON:0003075!5.31e-22!71;UBERON:0007284!5.31e-22!71;UBERON:0003056!1.38e-20!49;UBERON:0004121!1.10e-19!102;UBERON:0000924!1.10e-19!102;UBERON:0006601!1.10e-19!102;UBERON:0001049!1.89e-19!52;UBERON:0005068!1.89e-19!52;UBERON:0006241!1.89e-19!52;UBERON:0007135!1.89e-19!52;UBERON:0003080!6.72e-19!40;UBERON:0002780!1.85e-18!39;UBERON:0001890!1.85e-18!39;UBERON:0006240!1.85e-18!39;UBERON:0000033!3.81e-18!63;UBERON:0000955!6.52e-18!50;UBERON:0006238!6.52e-18!50;UBERON:0002020!1.78e-17!34;UBERON:0002616!2.27e-17!49;UBERON:0002791!1.80e-14!29;UBERON:0003528!1.80e-14!29;UBERON:0001893!1.80e-14!29;UBERON:0000956!4.49e-10!21;UBERON:0001869!4.49e-10!21;UBERON:0000203!4.49e-10!21;UBERON:0000468!1.14e-09!333;UBERON:0000153!1.33e-09!94;UBERON:0007811!4.18e-08!86;UBERON:0002619!9.85e-08!17;UBERON:0000922!2.53e-07!328;UBERON:0000479!7.18e-07!349 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.04e-22,73;UBERON:0001016,9.58e-22,75;UBERON:0002346,1.04e-21,64;UBERON:0003075,1.04e-21,64;UBERON:0007284,1.04e-21,64;UBERON:0003056,1.46e-20,49;UBERON:0000073,5.16e-20,54;UBERON:0001049,5.02e-19,52;UBERON:0005068,5.02e-19,52;UBERON:0006241,5.02e-19,52;UBERON:0007135,5.02e-19,52;UBERON:0004121,7.23e-19,95;UBERON:0000924,7.23e-19,95;UBERON:0006601,7.23e-19,95;UBERON:0003080,8.10e-19,40;UBERON:0002780,2.28e-18,39;UBERON:0001890,2.28e-18,39;UBERON:0006240,2.28e-18,39;UBERON:0010371,2.87e-18,73;UBERON:0002020,2.38e-17,34;UBERON:0000955,2.15e-16,47;UBERON:0006238,2.15e-16,47;UBERON:0002616,7.45e-16,46;UBERON:0003528,2.71e-14,29;UBERON:0002791,2.71e-14,29;UBERON:0001893,2.71e-14,29;UBERON:0010314,2.10e-13,92;UBERON:0000956,8.00e-10,21;UBERON:0001869,8.00e-10,21;UBERON:0000203,8.00e-10,21;UBERON:0002619,1.87e-07,17;UBERON:0000922,8.80e-07,320 | |||
|phase1_expression=16.8156289460034,0.348975407639361,0.454999239389536,0,0,0,0,1.29123323441576,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,10.8004978491859,1.09220046320974,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0.782391344348039,1.74420125104357,0.439372365468944,0.58328969722285,1.53985063787899,2.87505128729943,0,1.45072428402269,0,0,0.286533439938757,0.515672092277442,135.147395854211,147.059492237625,135.639920350322,1.0165335962074,1.77858959222228,0,0,0,5.39280198933128,3.45796474789399,95.290753711491,108.544774418679,100.114681603258,57.7014988495683,53.2293183693389,126.777977187477,138.59255109237,125.013754978963,24.2254938198655,34.0925192687451,31.3357327842737,184.640802822271,183.066774848422,156.794924537585,17.8677119360884,42.7699583624077,52.5625972352227,78.3712037359956,69.3350085491631,128.429218173632,1.8931548333296,9.59758813356176,0.579728977403356,2.58127163094416,0,1.07940638327563,0.649776417447669,0,2.66844398250329,0,0,0,10.7040999030277,0,0,0,0,0,0,1.48439043634778,3.10725460376606,6.53145411885229,21.8591511725331,20.7036525252256,17.5267777914604,11.3041980414467,16.6975964132701,1.88499886994513,0.494389935468748,0.578397427679647,0.884610551949874,4.20593809863264,0.883366073841574,0,3.72783522436244,0.292780797011547,2.09446706813455,1.02182822083437,0.11981512450592,0,0.127070227073065,34.601637702514,85.5526127270832,211.853237662289,57.7096743038358,67.2531652778769,40.3108806445547,64.5720227009675,17.3126918545538,0.497627882440372,0.758168275301024,1.47309299120532,19.778307330331,23.4500146522142,31.8709969755468,33.7578791952002,38.8488410154082,39.8433670085883,32.5144984222259,9.57202471734358,42.4668946077699,37.0647917128926,38.3573450677409,26.0842921588814,20.2974491934686,13.9300866608867,11.1122353660289,18.9082553477569,0,0,0,9.11353399156208,10.0846205791871,6.12211008967451,12.7842157216014,1.96764231747404,2.46827380619805,1.86027155800326,1.07309360559848,0.583826711835847,2.30383789878873,1.14917224855367,0.56748166682099,0.877199924551994,0.439100230582101,0.402619256281115,93.3687371624725,170.512942712474,0,0.528901133327089,28.7939138222566,21.3657738111603,13.4022159774977,8.87407508342707,7.33847544688072,6.27744566171445,1.89811624617805,5.43506550589236,4.02136334080431,5.57078121715222,6.04388670069272,1.79763881730844,3.6743468478698,1.99141273254367,22.0014765105575,13.9383185383869,15.7790829942313,11.8117770150282,12.412959178728,10.8710520829994,17.0738650235495,4.13308414342886,4.70996183524124,3.33172342588861,1.77871576252289,2.16898637430922,2.55526693647164,1.12431056192427,0.405720242777006,0.241177159752417,1.52775511068852,2.5892652370573,0.324270453550071,1.37280706594041,4.31304619582064,2.60498663367952,2.18426371180192,2.27320990152401,1.07638448113147,0,3.69506380333209,26.5287976478679,23.3039916312097,17.144253663294,9.85699042811709,9.38035041674168,6.18913466303636,5.26860849216057,13.24135210492,11.9590932410338,16.2643864030637,10.9788420859544,11.3972088031491,7.95569822198314,0,0,0,0,18.6238684385839,20.6292568402278,0,1.00988370881749,20.1925260426404,14.8366722832723,29.2975820916607,6.69112634267146,8.02075226696619,12.1722908239198,10.9298889452221,22.7959569170823,24.1125544547379,49.8048040453801,5.81954349353901,19.0530195923963,15.9629220166505,20.7862354945395,0,17.7229864393136,12.3952658355548,7.73280826999182,6.79194353625777,8.30074899448604,5.94385074286909,7.27067458955011,6.77345018930971,1.8962205476149,1.05418608574999,0,22.46901397975,30.790447079354,38.4195290834781,28.5068256592018,26.7783752799833,37.992558149241,45.5800787067875,29.8375650132307,0.469343416127421,2.1183207086382,1.10264199027481,2.14352128823924,8.39615018818709,4.94565984410878,3.81991500810037,0.492422699235184,2.91480836629851,19.284231409093,1.87957968877638,35.0857675537478,17.2230910453832,2.0720530270516,2.1871076435364,1.60144721244566,0.339956859987711,0.559805809294632,0.138199973804424,1.90934123603023,29.8937513934173,16.2655573701479,9.82848601478391,10.6635030967379,10.0446779323242,7.28267470478032,7.68677138245624,1.30877970992015,1.29614973291793,0,0,12.1108402295623,10.2584264083401,15.5560950675238,14.2075805825504,16.3887441726055,20.4201595243612,9.63512447845231,6.29156066554265,0.966336483304024,1.15212002503146,0.316011120628178,14.3934902856017,9.96296284498824,3.50786222040047,3.04345382634718,2.18549490259391,0.841368146639782,3.2491695978407,0.908698049533329,1.21930890648,0.403304740547362,0.779663045918019,0.962118416403295,1.16876902181569,0.226730383615211,0,0,0,1.54551675225752,0.563047426353546,14.4689783171139,1.92931541171159,0,75.6767469106869,59.842280745933,76.7679988008791,62.0389988260712,56.1767666211927,55.8991484068378,45.9015300157628,36.0256962579376,36.2513927187364,44.0096264989047,37.3634451303036,65.4400792377691,49.683479274453,28.6865926140587,47.582187916552,30.33417889425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|phase1_expression=16.8156289460034,0.348975407639361,0.454999239389536,0,0,0,0,1.29123323441576,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,10.8004978491859,1.09220046320974,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0.782391344348039,1.74420125104357,0.439372365468944,0.58328969722285,1.53985063787899,2.87505128729943,0,1.45072428402269,0,0,0.286533439938757,0.515672092277442,135.147395854211,147.059492237625,135.639920350322,1.0165335962074,1.77858959222228,0,0,0,5.39280198933128,3.45796474789399,95.290753711491,108.544774418679,100.114681603258,57.7014988495683,53.2293183693389,126.777977187477,138.59255109237,125.013754978963,24.2254938198655,34.0925192687451,31.3357327842737,184.640802822271,183.066774848422,156.794924537585,17.8677119360884,42.7699583624077,52.5625972352227,78.3712037359956,69.3350085491631,128.429218173632,1.8931548333296,9.59758813356176,0.579728977403356,2.58127163094416,0,1.07940638327563,0.649776417447669,0,2.66844398250329,0,0,0,10.7040999030277,0,0,0,0,0,0,1.48439043634778,3.10725460376606,6.53145411885229,21.8591511725331,20.7036525252256,17.5267777914604,11.3041980414467,16.6975964132701,1.88499886994513,0.494389935468748,0.578397427679647,0.884610551949874,4.20593809863264,0.883366073841574,0,3.72783522436244,0.292780797011547,2.09446706813455,1.02182822083437,0.11981512450592,0,0.127070227073065,34.601637702514,85.5526127270832,211.853237662289,57.7096743038358,67.2531652778769,40.3108806445547,64.5720227009675,17.3126918545538,0.497627882440372,0.758168275301024,1.47309299120532,19.778307330331,23.4500146522142,31.8709969755468,33.7578791952002,38.8488410154082,39.8433670085883,32.5144984222259,9.57202471734358,42.4668946077699,37.0647917128926,38.3573450677409,26.0842921588814,20.2974491934686,13.9300866608867,11.1122353660289,18.9082553477569,0,0,0,9.11353399156208,10.0846205791871,6.12211008967451,12.7842157216014,1.96764231747404,2.46827380619805,1.86027155800326,1.07309360559848,0.583826711835847,2.30383789878873,1.14917224855367,0.56748166682099,0.877199924551994,0.439100230582101,0.402619256281115,93.3687371624725,170.512942712474,0,0.528901133327089,28.7939138222566,21.3657738111603,13.4022159774977,8.87407508342707,7.33847544688072,6.27744566171445,1.89811624617805,5.43506550589236,4.02136334080431,5.57078121715222,6.04388670069272,1.79763881730844,3.6743468478698,1.99141273254367,22.0014765105575,13.9383185383869,15.7790829942313,11.8117770150282,12.412959178728,10.8710520829994,17.0738650235495,4.13308414342886,4.70996183524124,3.33172342588861,1.77871576252289,2.16898637430922,2.55526693647164,1.12431056192427,0.405720242777006,0.241177159752417,1.52775511068852,2.5892652370573,0.324270453550071,1.37280706594041,4.31304619582064,2.60498663367952,2.18426371180192,2.27320990152401,1.07638448113147,0,3.69506380333209,26.5287976478679,23.3039916312097,17.144253663294,9.85699042811709,9.38035041674168,6.18913466303636,5.26860849216057,13.24135210492,11.9590932410338,16.2643864030637,10.9788420859544,11.3972088031491,7.95569822198314,0,0,0,0,18.6238684385839,20.6292568402278,0,1.00988370881749,20.1925260426404,14.8366722832723,29.2975820916607,6.69112634267146,8.02075226696619,12.1722908239198,10.9298889452221,22.7959569170823,24.1125544547379,49.8048040453801,5.81954349353901,19.0530195923963,15.9629220166505,20.7862354945395,0,17.7229864393136,12.3952658355548,7.73280826999182,6.79194353625777,8.30074899448604,5.94385074286909,7.27067458955011,6.77345018930971,1.8962205476149,1.05418608574999,0,22.46901397975,30.790447079354,38.4195290834781,28.5068256592018,26.7783752799833,37.992558149241,45.5800787067875,29.8375650132307,0.469343416127421,2.1183207086382,1.10264199027481,2.14352128823924,8.39615018818709,4.94565984410878,3.81991500810037,0.492422699235184,2.91480836629851,19.284231409093,1.87957968877638,35.0857675537478,17.2230910453832,2.0720530270516,2.1871076435364,1.60144721244566,0.339956859987711,0.559805809294632,0.138199973804424,1.90934123603023,29.8937513934173,16.2655573701479,9.82848601478391,10.6635030967379,10.0446779323242,7.28267470478032,7.68677138245624,1.30877970992015,1.29614973291793,0,0,12.1108402295623,10.2584264083401,15.5560950675238,14.2075805825504,16.3887441726055,20.4201595243612,9.63512447845231,6.29156066554265,0.966336483304024,1.15212002503146,0.316011120628178,14.3934902856017,9.96296284498824,3.50786222040047,3.04345382634718,2.18549490259391,0.841368146639782,3.2491695978407,0.908698049533329,1.21930890648,0.403304740547362,0.779663045918019,0.962118416403295,1.16876902181569,0.226730383615211,0,0,0,1.54551675225752,0.563047426353546,14.4689783171139,1.92931541171159,0,75.6767469106869,59.842280745933,76.7679988008791,62.0389988260712,56.1767666211927,55.8991484068378,45.9015300157628,36.0256962579376,36.2513927187364,44.0096264989047,37.3634451303036,65.4400792377691,49.683479274453,28.6865926140587,47.582187916552,30.33417889425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| ||
|short_description=p1@D430019H16Rik | |short_description=p1@D430019H16Rik | ||
}} | }} |
Latest revision as of 06:20, 26 September 2015
Short description: | p1@D430019H16Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_D430019H16Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_NM_001252508_5end |
EntrezGene: | D430019H16Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.50e-14 | 23 |
neuroblast (sensu Vertebrata) | 3.50e-14 | 23 |
neuron | 7.40e-14 | 33 |
neuronal stem cell | 7.40e-14 | 33 |
neuroblast | 7.40e-14 | 33 |
electrically signaling cell | 7.40e-14 | 33 |
neural cell | 4.67e-09 | 43 |
ectodermal cell | 4.82e-09 | 44 |
neurectodermal cell | 4.82e-09 | 44 |
electrically responsive cell | 9.73e-09 | 39 |
electrically active cell | 9.73e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.04e-22 | 73 |
nervous system | 9.58e-22 | 75 |
neurectoderm | 1.04e-21 | 64 |
neural plate | 1.04e-21 | 64 |
presumptive neural plate | 1.04e-21 | 64 |
pre-chordal neural plate | 1.46e-20 | 49 |
regional part of nervous system | 5.16e-20 | 54 |
neural tube | 5.02e-19 | 52 |
neural rod | 5.02e-19 | 52 |
future spinal cord | 5.02e-19 | 52 |
neural keel | 5.02e-19 | 52 |
ectoderm-derived structure | 7.23e-19 | 95 |
ectoderm | 7.23e-19 | 95 |
presumptive ectoderm | 7.23e-19 | 95 |
anterior neural tube | 8.10e-19 | 40 |
regional part of forebrain | 2.28e-18 | 39 |
forebrain | 2.28e-18 | 39 |
future forebrain | 2.28e-18 | 39 |
ecto-epithelium | 2.87e-18 | 73 |
gray matter | 2.38e-17 | 34 |
brain | 2.15e-16 | 47 |
future brain | 2.15e-16 | 47 |
regional part of brain | 7.45e-16 | 46 |
brain grey matter | 2.71e-14 | 29 |
regional part of telencephalon | 2.71e-14 | 29 |
telencephalon | 2.71e-14 | 29 |
structure with developmental contribution from neural crest | 2.10e-13 | 92 |
cerebral cortex | 8.00e-10 | 21 |
cerebral hemisphere | 8.00e-10 | 21 |
pallium | 8.00e-10 | 21 |
regional part of cerebral cortex | 1.87e-07 | 17 |
embryo | 8.80e-07 | 320 |