FFCP PHASE1:Mm9::chr10:70747954..70747977,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=216080 | |EntrezGene=216080 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000144231_5end | |association_with_transcript=0bp_to_ENSMUST00000144231_5end | ||
|cluster_id=chr10:70747954..70747977,- | |||
|description=CAGE_peak_1_at_Ube2d1_5end | |description=CAGE_peak_1_at_Ube2d1_5end | ||
|id=chr10:70747954..70747977,- | |id=chr10:70747954..70747977,- | ||
|ontology_enrichment_celltype=CL:0000540!1.16e-15!33;CL:0000047!1.16e-15!33;CL:0000031!1.16e-15!33;CL:0000404!1.16e-15!33;CL:0002319!1.41e-14!43;CL:0000393!2.31e-14!39;CL:0000211!2.31e-14!39;CL:0000117!5.11e-14!23;CL:0000337!5.11e-14!23;CL:0000221!5.62e-14!44;CL:0000133!5.62e-14!44;CL:0000055!4.48e-13!50 | |ontology_enrichment_celltype=CL:0000540!1.16e-15!33;CL:0000047!1.16e-15!33;CL:0000031!1.16e-15!33;CL:0000404!1.16e-15!33;CL:0002319!1.41e-14!43;CL:0000393!2.31e-14!39;CL:0000211!2.31e-14!39;CL:0000117!5.11e-14!23;CL:0000337!5.11e-14!23;CL:0000221!5.62e-14!44;CL:0000133!5.62e-14!44;CL:0000055!4.48e-13!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.16e-15,33;CL:0000047,1.16e-15,33;CL:0000031,1.16e-15,33;CL:0000404,1.16e-15,33;CL:0002319,1.41e-14,43;CL:0000393,2.31e-14,39;CL:0000211,2.31e-14,39;CL:0000117,5.11e-14,23;CL:0000337,5.11e-14,23;CL:0000221,5.62e-14,44;CL:0000133,5.62e-14,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.86e-26!73;UBERON:0005743!5.86e-26!73;UBERON:0000073!1.09e-25!75;UBERON:0001016!1.09e-25!75;UBERON:0004121!5.97e-20!102;UBERON:0000924!5.97e-20!102;UBERON:0006601!5.97e-20!102;UBERON:0001049!8.52e-19!52;UBERON:0005068!8.52e-19!52;UBERON:0006241!8.52e-19!52;UBERON:0007135!8.52e-19!52;UBERON:0000955!6.95e-18!50;UBERON:0006238!6.95e-18!50;UBERON:0002616!1.89e-17!49;UBERON:0002020!3.82e-17!34;UBERON:0000033!3.84e-17!63;UBERON:0002346!2.50e-16!71;UBERON:0003075!2.50e-16!71;UBERON:0007284!2.50e-16!71;UBERON:0002791!6.69e-15!29;UBERON:0003528!6.69e-15!29;UBERON:0001893!6.69e-15!29;UBERON:0003056!1.54e-14!49;UBERON:0003080!3.97e-14!40;UBERON:0002780!1.31e-13!39;UBERON:0001890!1.31e-13!39;UBERON:0006240!1.31e-13!39;UBERON:0000153!1.75e-12!94;UBERON:0007811!3.31e-11!86;UBERON:0000956!1.89e-10!21;UBERON:0001869!1.89e-10!21;UBERON:0000203!1.89e-10!21;UBERON:0002619!3.53e-08!17 | |ontology_enrichment_uberon=UBERON:0001017!5.86e-26!73;UBERON:0005743!5.86e-26!73;UBERON:0000073!1.09e-25!75;UBERON:0001016!1.09e-25!75;UBERON:0004121!5.97e-20!102;UBERON:0000924!5.97e-20!102;UBERON:0006601!5.97e-20!102;UBERON:0001049!8.52e-19!52;UBERON:0005068!8.52e-19!52;UBERON:0006241!8.52e-19!52;UBERON:0007135!8.52e-19!52;UBERON:0000955!6.95e-18!50;UBERON:0006238!6.95e-18!50;UBERON:0002616!1.89e-17!49;UBERON:0002020!3.82e-17!34;UBERON:0000033!3.84e-17!63;UBERON:0002346!2.50e-16!71;UBERON:0003075!2.50e-16!71;UBERON:0007284!2.50e-16!71;UBERON:0002791!6.69e-15!29;UBERON:0003528!6.69e-15!29;UBERON:0001893!6.69e-15!29;UBERON:0003056!1.54e-14!49;UBERON:0003080!3.97e-14!40;UBERON:0002780!1.31e-13!39;UBERON:0001890!1.31e-13!39;UBERON:0006240!1.31e-13!39;UBERON:0000153!1.75e-12!94;UBERON:0007811!3.31e-11!86;UBERON:0000956!1.89e-10!21;UBERON:0001869!1.89e-10!21;UBERON:0000203!1.89e-10!21;UBERON:0002619!3.53e-08!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.86e-26,73;UBERON:0001016,1.09e-25,75;UBERON:0004121,2.30e-23,95;UBERON:0000924,2.30e-23,95;UBERON:0006601,2.30e-23,95;UBERON:0002346,2.80e-20,64;UBERON:0003075,2.80e-20,64;UBERON:0007284,2.80e-20,64;UBERON:0000073,7.93e-20,54;UBERON:0001049,8.52e-19,52;UBERON:0005068,8.52e-19,52;UBERON:0006241,8.52e-19,52;UBERON:0007135,8.52e-19,52;UBERON:0010371,1.17e-17,73;UBERON:0002020,3.82e-17,34;UBERON:0000955,3.01e-16,47;UBERON:0006238,3.01e-16,47;UBERON:0010314,3.01e-16,92;UBERON:0002616,8.00e-16,46;UBERON:0003528,6.69e-15,29;UBERON:0002791,6.69e-15,29;UBERON:0001893,6.69e-15,29;UBERON:0003056,1.54e-14,49;UBERON:0003080,3.97e-14,40;UBERON:0002780,1.31e-13,39;UBERON:0001890,1.31e-13,39;UBERON:0006240,1.31e-13,39;UBERON:0000956,1.89e-10,21;UBERON:0001869,1.89e-10,21;UBERON:0000203,1.89e-10,21;UBERON:0002619,3.53e-08,17 | |||
|phase1_expression=23.0614339830903,7.32848356042658,8.18998630901165,6.95667686005709,7.01254021924886,14.1018588405987,16.1192722010913,17.6898953114959,49.5576301973867,50.7920022118726,29.6207085030124,29.5954709872698,23.9681021903688,25.2644962990902,9.66018309265422,7.28910962603373,0.699561878128147,28.2338637995623,24.9548269162445,23.7658205006897,27.1288095581913,21.1489726057886,23.2467812333652,13.9193407830264,15.3704218315004,5.16808767703518,13.7843838770904,10.9890328669803,16.1519906537918,13.3575968772763,15.299405235216,0,0,15.8481681015439,14.1537293678125,15.2935873729813,11.0251452381679,12.1374172913703,21.0960543021426,14.6586648312664,11.1763982725893,10.9287277593351,6.79714494243615,48.847965374524,47.2416499482938,48.0892490663606,36.7723931843578,44.913182214372,27.460772841809,32.8586529435539,28.6972164331993,46.0008205967909,34.7309994539514,27.5637613964311,26.8875039313971,26.2404624756666,21.4900079954068,21.6582278756526,149.309548114383,176.153996097587,171.768310350175,31.1736969503602,40.9075606211124,31.9464399634897,31.6437236021432,20.6039233334369,42.8428158041319,49.9483796918021,113.125367028549,125.285510771809,113.785804091098,57.1301968807607,67.5857735311937,133.882443541945,155.173817578525,137.882817991503,83.6880695595354,88.3596379549499,93.8535918195648,153.119980054755,161.384203314651,127.102862415849,92.6887556684585,57.4017862232314,62.6472815884921,75.4249178812589,65.6333448483865,113.517262507608,27.4128819866126,41.8666442991592,30.7256358023778,15.487629785665,12.9194553404473,15.6513925574967,14.9448576012964,20.1612099193801,99.2942050331486,49.2543632250587,44.4234067870906,40.6340510686891,20.4222958676187,20.5322363862909,50.9610479413291,7.11066703153331,33.7726023977494,33.443502242713,30.8369911459018,28.7743376892031,85.4495016035667,14.1020032111584,25.8493136881542,25.5751001782199,19.602317266765,18.5388847879726,21.518733405834,10.4303270803631,13.1013332899218,27.0400797440235,77.8457285715889,58.0742991311199,105.120562787147,96.005300120774,33.550517019262,65.290117733575,47.9632958602812,15.5828803677241,11.2626217035565,8.99854096490112,10.2926883929182,87.6275240518213,104.310137442647,121.633412845253,78.568592726909,61.88314067394,98.9071092103506,78.0380475355914,19.7568365869614,36.4512423887573,15.9215337813215,32.6184876624035,45.5421550369463,44.3711061556603,56.5395087588797,47.622722436086,37.8963300272896,43.3024374562792,35.7003570572567,41.6512426889815,60.7901740070615,54.4625510883319,42.4042209235117,38.3592531748256,35.8680951501021,36.2182253183053,33.1309239616789,26.2725232200411,16.1509033082044,15.6982223339976,11.0823764764281,33.5543751507513,35.6479611171266,35.6522881692809,41.4303287274118,39.943139044723,36.715572867196,39.7633045523197,33.2659017735528,37.9487362693301,27.3169350856378,38.0868516663501,45.8038773934085,55.2635952467756,68.0605357402257,47.1064529848905,81.1719201457531,119.266445747591,13.5471701023357,12.164726066523,39.6716145995535,39.4802342162745,30.5415883333361,24.2020229548011,22.9049385160216,22.446623881282,13.7613427847908,21.5755630688454,17.8447998248191,18.502951899827,19.3014446247929,16.178749355776,15.561939590978,11.948476395262,42.6752777144434,29.5903647659198,37.1935527721165,31.9732584717143,25.9896332804618,20.7602026875343,21.2474764737504,29.3744194479408,18.0548537017581,24.4326384565165,13.0439155918346,10.3443965543978,12.7763346823582,6.97072548393047,10.3458661908136,6.51178331331525,9.16653066413111,8.91858026097513,8.91743747262695,7.96228098245436,7.18841032636773,14.8856379067401,15.9139213288426,11.1134706296729,14.1723956682311,14.473305640901,21.8008764396594,31.0765915303595,36.3411897465718,28.6869194960068,26.2853078083122,28.6435700225505,22.6141458841713,22.4403695036469,26.1674339216277,25.0255099303116,23.9182152986231,21.6299575424774,24.1758974612254,18.2257813812705,13.5712155545345,15.7732648307426,12.2941068254759,14.6246475541508,101.307422282297,92.2455973480639,48.1968739407426,386.028047695486,56.4759712755099,52.7092304800462,54.2866962286653,58.5473554983752,59.2644473059168,56.6153061577665,48.1724734993124,53.7750778556814,56.1308644684063,67.1561551321577,34.4914407056093,26.7098405500883,21.8268525533792,45.3667838174472,18.5843193675948,29.1336763385978,25.0928552280743,17.1630622577867,22.147641966058,20.5981549122431,14.2135561242522,11.9966130727577,16.7553767840819,13.2735438333043,9.48767477174989,13.4076206222643,36.0865982099015,35.8321577122307,38.1608117159126,32.1505552547388,29.9704994855442,24.7932656466878,30.9352158731987,24.9661258273971,14.0803024838226,8.26145076368899,12.3495902910779,116.904353335509,39.7202489671928,30.8802175632158,26.0231709926837,29.2170801546209,11.0762717919343,117.745066776674,13.8405413446261,19.1939787205797,13.1488114432495,7.53473828018764,10.935538217682,10.7525741407066,9.34881364966204,10.9162132812453,12.9907975376158,61.0989195529673,48.5575750147043,31.9211563389152,26.0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| ||
|short_description=p1@Ube2d1 | |short_description=p1@Ube2d1 | ||
}} | }} |
Latest revision as of 06:26, 26 September 2015
Short description: | p1@Ube2d1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ube2d1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000144231_5end |
EntrezGene: | Ube2d1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.16e-15 | 33 |
neuronal stem cell | 1.16e-15 | 33 |
neuroblast | 1.16e-15 | 33 |
electrically signaling cell | 1.16e-15 | 33 |
neural cell | 1.41e-14 | 43 |
electrically responsive cell | 2.31e-14 | 39 |
electrically active cell | 2.31e-14 | 39 |
CNS neuron (sensu Vertebrata) | 5.11e-14 | 23 |
neuroblast (sensu Vertebrata) | 5.11e-14 | 23 |
ectodermal cell | 5.62e-14 | 44 |
neurectodermal cell | 5.62e-14 | 44 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.86e-26 | 73 |
nervous system | 1.09e-25 | 75 |
ectoderm-derived structure | 2.30e-23 | 95 |
ectoderm | 2.30e-23 | 95 |
presumptive ectoderm | 2.30e-23 | 95 |
neurectoderm | 2.80e-20 | 64 |
neural plate | 2.80e-20 | 64 |
presumptive neural plate | 2.80e-20 | 64 |
regional part of nervous system | 7.93e-20 | 54 |
neural tube | 8.52e-19 | 52 |
neural rod | 8.52e-19 | 52 |
future spinal cord | 8.52e-19 | 52 |
neural keel | 8.52e-19 | 52 |
ecto-epithelium | 1.17e-17 | 73 |
gray matter | 3.82e-17 | 34 |
brain | 3.01e-16 | 47 |
future brain | 3.01e-16 | 47 |
structure with developmental contribution from neural crest | 3.01e-16 | 92 |
regional part of brain | 8.00e-16 | 46 |
brain grey matter | 6.69e-15 | 29 |
regional part of telencephalon | 6.69e-15 | 29 |
telencephalon | 6.69e-15 | 29 |
pre-chordal neural plate | 1.54e-14 | 49 |
anterior neural tube | 3.97e-14 | 40 |
regional part of forebrain | 1.31e-13 | 39 |
forebrain | 1.31e-13 | 39 |
future forebrain | 1.31e-13 | 39 |
cerebral cortex | 1.89e-10 | 21 |
cerebral hemisphere | 1.89e-10 | 21 |
pallium | 1.89e-10 | 21 |
regional part of cerebral cortex | 3.53e-08 | 17 |