FFCP PHASE1:Mm9::chr17:32967140..32967197,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:32967140..32967197,-
|short_description=p1@Zfp799
|description=CAGE_peak_1_at_Zfp799_5end
|association_with_transcript=0bp_to_NM_177359,uc008bxo.1_5end
|...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=240064 | |EntrezGene=240064 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=399 | |||
|TSSclassifier=NA | |||
|UniProt=F6SC80,Q8BHK4 | |UniProt=F6SC80,Q8BHK4 | ||
|association_with_transcript=0bp_to_NM_177359,uc008bxo.1_5end | |||
|cluster_id=chr17:32967140..32967197,- | |||
|description=CAGE_peak_1_at_Zfp799_5end | |||
|id=chr17:32967140..32967197,- | |||
|ontology_enrichment_celltype=CL:0000540!7.45e-11!33;CL:0000047!7.45e-11!33;CL:0000031!7.45e-11!33;CL:0000404!7.45e-11!33;CL:0000393!7.46e-09!39;CL:0000211!7.46e-09!39;CL:0000117!2.96e-08!23;CL:0000337!2.96e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.45e-11,33;CL:0000047,7.45e-11,33;CL:0000031,7.45e-11,33;CL:0000404,7.45e-11,33;CL:0000393,7.46e-09,39;CL:0000211,7.46e-09,39;CL:0000117,2.96e-08,23;CL:0000337,2.96e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!7.91e-22!94;UBERON:0000033!1.08e-20!63;UBERON:0003056!6.50e-19!49;UBERON:0001017!9.70e-19!73;UBERON:0005743!9.70e-19!73;UBERON:0000955!4.84e-18!50;UBERON:0006238!4.84e-18!50;UBERON:0007811!9.91e-18!86;UBERON:0002346!1.25e-17!71;UBERON:0003075!1.25e-17!71;UBERON:0007284!1.25e-17!71;UBERON:0002616!2.46e-17!49;UBERON:0000073!2.54e-17!75;UBERON:0001016!2.54e-17!75;UBERON:0004121!1.26e-16!102;UBERON:0000924!1.26e-16!102;UBERON:0006601!1.26e-16!102;UBERON:0001049!1.46e-16!52;UBERON:0005068!1.46e-16!52;UBERON:0006241!1.46e-16!52;UBERON:0007135!1.46e-16!52;UBERON:0003080!5.01e-16!40;UBERON:0002780!2.01e-15!39;UBERON:0001890!2.01e-15!39;UBERON:0006240!2.01e-15!39;UBERON:0002020!1.03e-11!34;UBERON:0002791!1.09e-11!29;UBERON:0003528!1.09e-11!29;UBERON:0001893!1.09e-11!29;UBERON:0000468!2.99e-09!333;UBERON:0000956!9.89e-09!21;UBERON:0001869!9.89e-09!21;UBERON:0000203!9.89e-09!21;UBERON:0000922!3.57e-08!328;UBERON:0000475!4.09e-08!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.80e-20,64;UBERON:0003075,4.80e-20,64;UBERON:0007284,4.80e-20,64;UBERON:0010371,1.83e-19,73;UBERON:0003056,6.50e-19,49;UBERON:0001017,9.40e-19,73;UBERON:0004121,3.17e-18,95;UBERON:0000924,3.17e-18,95;UBERON:0006601,3.17e-18,95;UBERON:0000073,1.58e-17,54;UBERON:0001016,2.47e-17,75;UBERON:0000955,1.15e-16,47;UBERON:0006238,1.15e-16,47;UBERON:0001049,1.46e-16,52;UBERON:0005068,1.46e-16,52;UBERON:0006241,1.46e-16,52;UBERON:0007135,1.46e-16,52;UBERON:0003080,5.01e-16,40;UBERON:0002616,5.69e-16,46;UBERON:0002780,2.01e-15,39;UBERON:0001890,2.01e-15,39;UBERON:0006240,2.01e-15,39;UBERON:0010314,7.79e-14,92;UBERON:0002020,1.03e-11,34;UBERON:0003528,1.09e-11,29;UBERON:0002791,1.09e-11,29;UBERON:0001893,1.09e-11,29;UBERON:0000956,9.88e-09,21;UBERON:0001869,9.88e-09,21;UBERON:0000203,9.88e-09,21;UBERON:0000922,1.29e-07,320 | |||
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| ||
|short_description=p1@Zfp799 | |||
}} | }} |
Latest revision as of 06:34, 26 September 2015
Short description: | p1@Zfp799 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zfp799_5end |
Coexpression cluster: | MCL_coexpression_mm9:399 |
Association with transcript: | 0bp_to_NM_177359, uc008bxo.1_5end |
EntrezGene: | Zfp799 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.45e-11 | 33 |
neuronal stem cell | 7.45e-11 | 33 |
neuroblast | 7.45e-11 | 33 |
electrically signaling cell | 7.45e-11 | 33 |
electrically responsive cell | 7.46e-09 | 39 |
electrically active cell | 7.46e-09 | 39 |
CNS neuron (sensu Vertebrata) | 2.96e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.96e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 4.80e-20 | 64 |
neural plate | 4.80e-20 | 64 |
presumptive neural plate | 4.80e-20 | 64 |
ecto-epithelium | 1.83e-19 | 73 |
pre-chordal neural plate | 6.50e-19 | 49 |
central nervous system | 9.40e-19 | 73 |
ectoderm-derived structure | 3.17e-18 | 95 |
ectoderm | 3.17e-18 | 95 |
presumptive ectoderm | 3.17e-18 | 95 |
regional part of nervous system | 1.58e-17 | 54 |
nervous system | 2.47e-17 | 75 |
brain | 1.15e-16 | 47 |
future brain | 1.15e-16 | 47 |
neural tube | 1.46e-16 | 52 |
neural rod | 1.46e-16 | 52 |
future spinal cord | 1.46e-16 | 52 |
neural keel | 1.46e-16 | 52 |
anterior neural tube | 5.01e-16 | 40 |
regional part of brain | 5.69e-16 | 46 |
regional part of forebrain | 2.01e-15 | 39 |
forebrain | 2.01e-15 | 39 |
future forebrain | 2.01e-15 | 39 |
structure with developmental contribution from neural crest | 7.79e-14 | 92 |
gray matter | 1.03e-11 | 34 |
brain grey matter | 1.09e-11 | 29 |
regional part of telencephalon | 1.09e-11 | 29 |
telencephalon | 1.09e-11 | 29 |
cerebral cortex | 9.88e-09 | 21 |
cerebral hemisphere | 9.88e-09 | 21 |
pallium | 9.88e-09 | 21 |
embryo | 1.29e-07 | 320 |