FFCP PHASE1:Mm9::chr9:112090402..112090442,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:112090402..112090442,-
|short_description=p2@Arpp21
|description=CAGE_peak_2_at_Arpp21_5end
|association_with_transcript=0bp_to_ENSMUST00000159220,ENSMUST0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=74100 | |EntrezGene=74100 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=90 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BY43,Q9DCB4 | |UniProt=Q8BY43,Q9DCB4 | ||
|association_with_transcript=0bp_to_ENSMUST00000159220,ENSMUST00000162082,ENSMUST00000172380,NM_001177615,NM_001177620,NM_028755,uc009rwg.2,uc009rwh.2,uc012hbu.1_5end | |||
|cluster_id=chr9:112090402..112090442,- | |||
|description=CAGE_peak_2_at_Arpp21_5end | |||
|id=chr9:112090402..112090442,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!3.20e-13!63;UBERON:0000955!6.96e-12!50;UBERON:0006238!6.96e-12!50;UBERON:0002616!2.79e-11!49;UBERON:0003056!1.04e-10!49;UBERON:0001049!1.47e-10!52;UBERON:0005068!1.47e-10!52;UBERON:0006241!1.47e-10!52;UBERON:0007135!1.47e-10!52;UBERON:0002346!1.96e-09!71;UBERON:0003075!1.96e-09!71;UBERON:0007284!1.96e-09!71;UBERON:0002791!2.55e-09!29;UBERON:0003528!2.55e-09!29;UBERON:0001893!2.55e-09!29;UBERON:0002020!2.87e-09!34;UBERON:0003080!4.16e-09!40;UBERON:0002021!4.54e-09!10;UBERON:0000411!4.54e-09!10;UBERON:0001950!4.54e-09!10;UBERON:0002780!1.49e-08!39;UBERON:0001890!1.49e-08!39;UBERON:0006240!1.49e-08!39;UBERON:0000153!2.58e-08!94;UBERON:0002619!3.46e-08!17;UBERON:0004121!9.63e-08!102;UBERON:0000924!9.63e-08!102;UBERON:0006601!9.63e-08!102;UBERON:0007811!2.16e-07!86;UBERON:0000956!3.62e-07!21;UBERON:0001869!3.62e-07!21;UBERON:0000203!3.62e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000955,1.43e-12,47;UBERON:0006238,1.43e-12,47;UBERON:0000073,4.52e-12,54;UBERON:0002021,7.63e-12,10;UBERON:0000411,7.63e-12,10;UBERON:0001950,7.63e-12,10;UBERON:0002616,8.35e-12,46;UBERON:0003528,3.61e-11,29;UBERON:0002791,3.61e-11,29;UBERON:0001893,3.61e-11,29;UBERON:0001049,5.70e-11,52;UBERON:0005068,5.70e-11,52;UBERON:0006241,5.70e-11,52;UBERON:0007135,5.70e-11,52;UBERON:0002619,1.86e-10,17;UBERON:0003080,3.05e-10,40;UBERON:0002780,1.57e-09,39;UBERON:0001890,1.57e-09,39;UBERON:0006240,1.57e-09,39;UBERON:0003056,1.72e-09,49;UBERON:0002346,1.93e-09,64;UBERON:0003075,1.93e-09,64;UBERON:0007284,1.93e-09,64;UBERON:0002020,2.64e-09,34;UBERON:0000956,4.48e-09,21;UBERON:0001869,4.48e-09,21;UBERON:0000203,4.48e-09,21;UBERON:0010371,4.13e-08,73;UBERON:0001017,1.06e-07,73;UBERON:0010314,1.95e-07,92;UBERON:0001016,3.18e-07,75 | |||
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| |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,56.8939611110657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.571301968807607,1.54607978666129,3.55223317723367,2.30029130443767,3.67687514644008,1.10115880999389,13.4071704989447,9.67721159514334,0.131886287730194,0.182975287204819,0,6.14202597803038,13.5063026407603,15.4326230254578,0.883885756421003,0.284743361598206,0,0.302904773332736,0.0755715601067855,0,0,0,0,0,0,7.5839986871146,0,0,0,0.422530259330042,0,0,0,0,0,0,6.39429726426736,0,0,0.520455980298408,0,0,0.150722640552623,0.470354828542819,0,0,0,0,7.44127509758082,6.40440403535141,1.93950101254089,0,12.296793474485,6.0739544975902,0,0,0,0,19.0234112044125,1019.3113430799,134.575811112878,298.282533449946,289.981328612595,98.2837450766719,304.202368252046,0,1.36847667671102,0,1.68353484709179,0.260240885925407,0.229902104433473,1.0803727788321,1.65775299619287,0.680364991513279,0.768682321709099,0.468508622798644,1.55222022443409,0,2.83659120251729,1.93546236580344,2.84954452155847,1.11218899690239,4.87553033131033,1.02891068203972,0,0,0,0,1.24275463521301,0.938104239924385,1.2604344302271,1.18372367792605,1.18058539048442,1.69693824176116,0.930135779001631,0.804820204198858,1.75148013550754,1.31647879930784,0.985004784474571,0.891756905004413,1.02339991197733,0.878200461164203,0.268412837520744,43.7403093013385,0.205809224758569,0,0,0.213288250535234,0.464473343720877,0.257734922644187,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.126473074248515,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0.162135226775035,0,1.43768206527355,0,0,0,0.538192240565737,0,0,0.568474235311454,0.325929952884052,0,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0.863424909329478,0,0,0,0,0,5.61927064957272,5.27452589664914,0,12.6235463602186,0,0,0,0,0,0,0,0,0.395287777946524,80.9729717382954,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0.295301892880773,0,0,0,1.42598951353889,0,0,0,3.06395645178409,0,0,0.428674070063185,0.177340233642274,0.178368817602071,0,0,0,0,0,0.65954501176592,2.42196640043858,1.38719727334758,0.716234064018819,0.984845398470368,0,5.37733375830478,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0.134864346384821,0.495920734352016,0,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0.576060012515731,0.316011120628178,0,0,0.389762468933385,0.179026695667481,0.39736270956253,0,0.295379054349154,0.100966449948148,0.15241361331,0,0,0,0,19.7255433745234,0,0,0,0,0,0,0,0,189.756619119334,212.670259266316,190.20131046188,162.229404132441,232.242974202248,221.330411935182,207.906930071396,259.835334260375,300.433417156528,246.971668705618,0.415149390336707,2.39414924040619,2.39027048055788,3.16038732188782,4.40187641518763,3.12533964365024,5.55616819504038,4.73880631649457,7.06022261101994,3.28506375292937,5.57654459758527,5.47016390019621,5.52484894072306,4.8018864303652,5.97328877138378,10.4784612082276,4.51948871184936,5.20854895252004,7.00546031365621,5.15196220470391,3.77156177623957,6.74408063405482,5.00715998889374,4.79643174886684,5.08190654242785,5.58456412085065,5.67076715905595,7.3659519202596,4.6173398707593,7.85599180320834,4.98267076121531,4.72821515402705,5.32000356120596,4.64810523557898,5.40138510747196,5.74564329257276,5.14649538579898,4.51229213501426,4.20834330551455,4.19123696327079,5.79669589051054 | ||
|short_description=p2@Arpp21 | |||
}} | }} |
Latest revision as of 06:34, 26 September 2015
Short description: | p2@Arpp21 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Arpp21_5end |
Coexpression cluster: | MCL_coexpression_mm9:90 |
Association with transcript: | 0bp_to_ENSMUST00000159220, ENSMUST00000162082, ENSMUST00000172380, NM_001177615, NM_001177620, NM_028755, uc009rwg.2, uc009rwh.2, uc012hbu.1_5end |
EntrezGene: | Arpp21 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brain | 1.43e-12 | 47 |
future brain | 1.43e-12 | 47 |
regional part of nervous system | 4.52e-12 | 54 |
occipital lobe | 7.63e-12 | 10 |
visual cortex | 7.63e-12 | 10 |
neocortex | 7.63e-12 | 10 |
regional part of brain | 8.35e-12 | 46 |
brain grey matter | 3.61e-11 | 29 |
regional part of telencephalon | 3.61e-11 | 29 |
telencephalon | 3.61e-11 | 29 |
neural tube | 5.70e-11 | 52 |
neural rod | 5.70e-11 | 52 |
future spinal cord | 5.70e-11 | 52 |
neural keel | 5.70e-11 | 52 |
regional part of cerebral cortex | 1.86e-10 | 17 |
anterior neural tube | 3.05e-10 | 40 |
regional part of forebrain | 1.57e-09 | 39 |
forebrain | 1.57e-09 | 39 |
future forebrain | 1.57e-09 | 39 |
pre-chordal neural plate | 1.72e-09 | 49 |
neurectoderm | 1.93e-09 | 64 |
neural plate | 1.93e-09 | 64 |
presumptive neural plate | 1.93e-09 | 64 |
gray matter | 2.64e-09 | 34 |
cerebral cortex | 4.48e-09 | 21 |
cerebral hemisphere | 4.48e-09 | 21 |
pallium | 4.48e-09 | 21 |
ecto-epithelium | 4.13e-08 | 73 |
central nervous system | 1.06e-07 | 73 |
structure with developmental contribution from neural crest | 1.95e-07 | 92 |
nervous system | 3.18e-07 | 75 |