FFCP PHASE1:Mm9::chr10:7383043..7383107,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18537 | |EntrezGene=18537 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=E9PWE0,F6TXE3,F7D432 | |UniProt=E9PWE0,F6TXE3,F7D432 | ||
|association_with_transcript=0bp_to_ENSMUST00000159917,ENSMUST00000160517,ENSMUST00000161123,ENSMUST00000163085_5end | |association_with_transcript=0bp_to_ENSMUST00000159917,ENSMUST00000160517,ENSMUST00000161123,ENSMUST00000163085_5end | ||
|cluster_id=chr10:7383043..7383107,- | |||
|description=CAGE_peak_1_at_Pcmt1_5end | |description=CAGE_peak_1_at_Pcmt1_5end | ||
|id=chr10:7383043..7383107,- | |id=chr10:7383043..7383107,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.58e-10!52;UBERON:0005068!1.58e-10!52;UBERON:0006241!1.58e-10!52;UBERON:0007135!1.58e-10!52;UBERON:0000955!1.00e-09!50;UBERON:0006238!1.00e-09!50;UBERON:0002616!1.21e-09!49;UBERON:0000073!1.28e-09!75;UBERON:0001016!1.28e-09!75;UBERON:0001017!2.84e-09!73;UBERON:0005743!2.84e-09!73;UBERON:0002346!4.46e-09!71;UBERON:0003075!4.46e-09!71;UBERON:0007284!4.46e-09!71;UBERON:0002020!2.24e-08!34;UBERON:0000033!3.34e-08!63;UBERON:0003080!3.41e-08!40;UBERON:0002780!9.72e-08!39;UBERON:0001890!9.72e-08!39;UBERON:0006240!9.72e-08!39;UBERON:0003056!5.86e-07!49;UBERON:0007811!8.55e-07!86 | |ontology_enrichment_uberon=UBERON:0001049!1.58e-10!52;UBERON:0005068!1.58e-10!52;UBERON:0006241!1.58e-10!52;UBERON:0007135!1.58e-10!52;UBERON:0000955!1.00e-09!50;UBERON:0006238!1.00e-09!50;UBERON:0002616!1.21e-09!49;UBERON:0000073!1.28e-09!75;UBERON:0001016!1.28e-09!75;UBERON:0001017!2.84e-09!73;UBERON:0005743!2.84e-09!73;UBERON:0002346!4.46e-09!71;UBERON:0003075!4.46e-09!71;UBERON:0007284!4.46e-09!71;UBERON:0002020!2.24e-08!34;UBERON:0000033!3.34e-08!63;UBERON:0003080!3.41e-08!40;UBERON:0002780!9.72e-08!39;UBERON:0001890!9.72e-08!39;UBERON:0006240!9.72e-08!39;UBERON:0003056!5.86e-07!49;UBERON:0007811!8.55e-07!86 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.25e-13,92;UBERON:0000073,1.59e-11,54;UBERON:0001049,1.58e-10,52;UBERON:0005068,1.58e-10,52;UBERON:0006241,1.58e-10,52;UBERON:0007135,1.58e-10,52;UBERON:0002346,8.09e-10,64;UBERON:0003075,8.09e-10,64;UBERON:0007284,8.09e-10,64;UBERON:0001016,1.28e-09,75;UBERON:0001017,2.84e-09,73;UBERON:0002020,2.24e-08,34;UBERON:0000955,2.67e-08,47;UBERON:0006238,2.67e-08,47;UBERON:0002616,3.24e-08,46;UBERON:0003080,3.41e-08,40;UBERON:0002780,9.72e-08,39;UBERON:0001890,9.72e-08,39;UBERON:0006240,9.72e-08,39;UBERON:0003056,5.86e-07,49;UBERON:0010371,6.17e-07,73;UBERON:0004121,9.66e-07,95;UBERON:0000924,9.66e-07,95;UBERON:0006601,9.66e-07,95 | |||
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|phase1_expression=41.3184025530368,24.7772539423946,30.4849490390989,42.0425253716494,40.5725541256541,37.9407154520871,33.8738328863512,35.1215439761087,61.5246715802784,53.3667120014145,36.9830811367091,32.9459016650739,35.4385510957596,35.4926833821129,78.9470135503121,88.2792165819641,147.607556285039,39.5905017524588,47.0302507267684,47.9560306531774,136.409437402316,45.1773827964028,58.5087527671215,36.9582496652769,37.3937128139487,39.0477735598214,38.7685796543167,30.8123862740821,37.0545667939929,29.9915854414318,47.6720597908905,55.8826992644475,59.6612843957033,47.5445043046316,41.3057816244323,44.5508849560759,43.2839035276223,147.323134019392,126.576325812856,137.163220921135,147.057872007754,135.243006021772,135.942898848723,51.3659017340355,58.899997038538,53.2285581268876,12.5182615095686,35.9741508027737,35.8088477857189,43.5522973926395,31.0769856008305,25.8754615856949,70.8042597563647,69.6347656330891,54.4471954610792,49.3938117189018,41.260815351181,52.0828813200217,41.4748744762175,42.8482693210347,43.1005354384202,32.8679196107058,31.1253178638899,28.7967909530048,34.6103226898441,34.1030455174128,20.6724076257699,25.3584081512226,40.3352591879978,47.6570962310868,45.6405166132499,83.9813894147183,89.4517590854035,41.1569085362246,42.4595436610787,56.0723459832113,127.734421959291,100.489935073043,110.289490877983,49.1935853233623,48.7629140400843,53.1331637967895,130.936826531648,131.686450747413,125.447361424761,79.844346663364,68.9078935067658,59.0886243266203,71.0311693465266,46.7787957061002,29.5661778475711,24.9522924324602,28.5587960157255,15.1116893658589,22.7421746106684,18.8171292580881,58.284434354677,54.5377032249785,61.8290690954828,57.2410110706751,45.4924245878678,51.3305909657271,63.7013099266614,71.1066703153331,65.3802943853867,61.566447310449,67.740275631981,38.023231946447,28.4831672011889,44.3841995803826,40.0751104829774,48.1055455733183,47.276176937492,55.6166543639177,39.5098055975968,36.8203112595949,50.6749683855466,36.2944385868978,94.6533290586365,55.1624958320665,68.9025537596428,62.0640324013084,41.0061874679869,54.4572282441478,55.2939305987521,35.7639877292028,46.8477136818148,81.5867714151034,68.6179226194549,103.804913107542,86.0101133299018,43.2250971268254,101.165754351905,83.1075236323574,110.335451661126,93.9376913162317,33.5051507067541,48.8919394497666,43.7210372090257,37.0377666360194,36.433724029557,52.8774840196988,41.5943519850357,48.9790657966074,40.5497534941914,45.0960295402671,44.5083191658712,50.7058606648471,38.8022387279116,37.8212160335639,33.4307135911503,34.6329257235568,44.4875598760957,38.6559904839605,41.3622094179966,33.0396882918699,70.9235319186367,64.3369767786788,62.2318063676348,57.1667132197985,53.2374156157088,54.3787425612265,50.4266286796498,56.8648629749997,61.8611122678387,60.2262916903556,67.8731705541037,62.3526928240685,67.469538464527,70.5920095540109,69.0706257330691,80.8485930462088,69.5973865472631,71.2636083617574,87.4806186026769,40.1327988279209,32.711459515396,37.2875298995597,34.1261200856374,37.3901041695306,37.8870336286954,28.0340099226446,31.1329261382818,33.4797101958104,33.6915633696603,30.469306623942,23.1228392096248,25.4664284212673,27.2949721966768,36.8515957548231,30.0431889325825,29.8711909881551,39.2612554972879,38.9587427999175,30.4310886317317,34.6207257337034,33.165875305664,27.7737846765661,30.480010893892,25.6841657484508,30.3007544733853,28.9983335216231,17.1942523710546,65.0695912292767,64.4713503971306,74.6542213117714,64.7123787229324,65.359010292905,74.605374571956,46.0313819921297,31.7785044479069,40.9096505650241,46.0058260887535,31.6319805518228,24.0269008298212,23.9949934049756,22.424676690239,13.5084185981743,50.0681145351499,42.2565848248181,38.6226994167601,35.8162130985647,42.7136251885074,40.2015017860358,37.8489389008762,46.8320754858717,44.7683809261582,43.4070791711599,36.5151420225645,51.1253541913103,44.5527253214011,44.5519100431056,73.8877291302434,53.8466626980522,41.7999632066181,30.6289788398253,121.697347210746,114.164182740806,29.5082901678016,110.077324261107,57.738004153175,57.0040566673092,52.5633090468029,46.5989156007476,39.8809626607485,41.3291734951695,63.5552801629584,58.1589157243511,55.3402889125133,50.4474466782237,32.6462195979018,38.2841047884599,30.7856353178259,37.7781581607106,34.5137359683903,31.0759214278376,37.4881210636291,37.1552007119119,31.0066987524811,40.2740043806545,27.1349707826632,36.7169066772281,42.0666906493971,36.9763006784905,32.6797686582496,42.2855727317566,71.8327568140493,40.5137461570448,42.8177243320917,45.225114391666,50.8966470553325,55.2943334566419,53.4784316956893,53.5858310441695,34.7314127934291,48.297712156951,60.4247810670596,39.5727007059552,34.7148517396197,34.1974284342644,35.9310755449441,30.3660664528363,30.6054878461343,125.347504159105,71.5948990543003,42.1029210644974,52.039662190889,92.677280846308,74.6350483356797,75.4967971581525,45.8941760983409,46.0440278144835,45.329591407851,31.5041303944987,31.000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| ||
|short_description=p1@Pcmt1 | |short_description=p1@Pcmt1 | ||
}} | }} |
Latest revision as of 06:40, 26 September 2015
Short description: | p1@Pcmt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pcmt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000159917, ENSMUST00000160517, ENSMUST00000161123, ENSMUST00000163085_5end |
EntrezGene: | Pcmt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 4.25e-13 | 92 |
regional part of nervous system | 1.59e-11 | 54 |
neural tube | 1.58e-10 | 52 |
neural rod | 1.58e-10 | 52 |
future spinal cord | 1.58e-10 | 52 |
neural keel | 1.58e-10 | 52 |
neurectoderm | 8.09e-10 | 64 |
neural plate | 8.09e-10 | 64 |
presumptive neural plate | 8.09e-10 | 64 |
nervous system | 1.28e-09 | 75 |
central nervous system | 2.84e-09 | 73 |
gray matter | 2.24e-08 | 34 |
brain | 2.67e-08 | 47 |
future brain | 2.67e-08 | 47 |
regional part of brain | 3.24e-08 | 46 |
anterior neural tube | 3.41e-08 | 40 |
regional part of forebrain | 9.72e-08 | 39 |
forebrain | 9.72e-08 | 39 |
future forebrain | 9.72e-08 | 39 |
pre-chordal neural plate | 5.86e-07 | 49 |
ecto-epithelium | 6.17e-07 | 73 |
ectoderm-derived structure | 9.66e-07 | 95 |
ectoderm | 9.66e-07 | 95 |
presumptive ectoderm | 9.66e-07 | 95 |