FFCP PHASE1:Mm9::chr2:24241853..24241889,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:24241853..24241889,+
|short_description=p6@Psd4
|description=CAGE_peak_6_at_Psd4_5end
|association_with_transcript=-199bp_to_ENSMUST00000127242_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=215632 | |EntrezGene=215632 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-199bp_to_ENSMUST00000127242_5end | |||
|cluster_id=chr2:24241853..24241889,+ | |||
|description=CAGE_peak_6_at_Psd4_5end | |||
|id=chr2:24241853..24241889,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.95e-11!32;CL:0002032!1.95e-11!32;CL:0000037!1.95e-11!32;CL:0000566!1.95e-11!32;CL:0000837!1.95e-11!32;CL:0000049!6.25e-09!19;CL:0002031!2.12e-08!25;CL:0002320!3.99e-08!46;CL:0000134!3.99e-08!46;CL:0000763!4.55e-07!16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,7.62e-20,19;CL:0000988,9.11e-16,32;CL:0002032,9.11e-16,32;CL:0000037,9.11e-16,32;CL:0000837,9.11e-16,32;CL:0000557,6.91e-15,7;CL:0000763,8.10e-15,16;CL:0002320,1.82e-14,46;CL:0000134,1.82e-14,46;CL:0000219,1.31e-11,54;CL:0000839,8.49e-10,13;CL:0000034,1.65e-09,97;CL:0002194,4.14e-09,4;CL:0000766,4.14e-09,4;CL:0000234,4.14e-09,4;CL:0000576,4.14e-09,4;CL:0000235,4.14e-09,4;CL:0000864,4.14e-09,4;CL:0002009,4.14e-09,4;CL:0000040,4.14e-09,4;CL:0000559,4.14e-09,4;CL:0002031,2.52e-08,25;CL:0002092,1.10e-07,3;CL:0002540,1.10e-07,3;CL:0000723,1.25e-07,91;CL:0000048,1.25e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.67e-08,3;DOID:4045,2.67e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!6.91e-19!48;UBERON:0002390!1.36e-17!45;UBERON:0003061!1.36e-17!45;UBERON:0002405!6.40e-15!70;UBERON:0002371!2.47e-12!16;UBERON:0001474!3.71e-11!22;UBERON:0004765!3.71e-11!22;UBERON:0001434!3.71e-11!22;UBERON:0002204!2.96e-08!32;UBERON:0002384!3.99e-08!46;UBERON:0003081!1.63e-07!88;UBERON:0004177!1.94e-07!29;UBERON:0000926!5.49e-07!193;UBERON:0004120!5.49e-07!193;UBERON:0006603!5.49e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,6.58e-26,22;UBERON:0004765,6.58e-26,22;UBERON:0001434,6.58e-26,22;UBERON:0002371,7.45e-25,16;UBERON:0002204,3.41e-24,32;UBERON:0002193,9.78e-17,48;UBERON:0002405,9.78e-17,48;UBERON:0002390,2.55e-16,45;UBERON:0003061,2.55e-16,45;UBERON:0002384,1.82e-14,46;UBERON:0003081,9.42e-10,87;UBERON:0002106,2.50e-08,6;UBERON:0004457,2.50e-08,6;UBERON:0000042,2.50e-08,6;UBERON:0004854,2.50e-08,6;UBERON:0009034,2.50e-08,6;UBERON:0002095,2.50e-08,6;UBERON:0004782,2.50e-08,6;UBERON:0003281,2.50e-08,6;UBERON:0009664,2.50e-08,6;UBERON:0002296,2.50e-08,6;UBERON:0005602,2.50e-08,6;UBERON:0001179,2.50e-08,6;UBERON:0006293,2.50e-08,6;UBERON:0000926,5.50e-08,120;UBERON:0004120,5.50e-08,120;UBERON:0006603,5.50e-08,120;UBERON:0003887,8.15e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0.563154888606667,0.468129052643987,0.34243593645101,0.319088635981346,1.02720437958723,0.0874204024189974,0.999329285446988,1.21485160433896,0.699561878128147,4.10100814965709,5.34746291062381,4.66828616977833,0.255129870453209,1.39007331681239,0.783599367416806,0.47997726838022,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,20.9265815368454,7.813353445238,18.8468547830567,24.1174910092716,21.1744100337118,27.6740901227758,0,0,0,0,0,0,0,0,0,3.6912173332702,0,0.336093799142464,0,0,0,0.202316460859598,0,0,0,0,2.6996991518442,3.9554654502679,8.5257613793532,2.69640099466564,1.53687322128622,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.11418387971906,3.10725460376606,0.148442139064825,0,0,0.461230994512117,0.150722640552623,0.117588707135705,0,0,0,6.19227386364912,0,1.54589062922275,2.90925151881133,0,0,0.209446706813455,0,1.67741174308288,3.59941638596045,1.90605340609597,0,0,0,0.173824320192276,0.255715457330331,0.20778804455956,0.162241263067758,0,1.99051152976149,0,0,0.130120442962704,0,0,0,0.0680364991513279,0,0,0,0.215567992932842,0.189106080167819,0,0.219195732427575,0,0,0,0,5.61770549850588,3.3455227924913,1.98914449576915,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0.0810688095458557,0.292399974850665,0,0.134206418760372,0,0,0,0.528901133327089,0,0,0,0.201683524623343,0,0.190225626112559,0.474529061544512,0,0.502670417600539,0.198956472041151,0.38992817423824,0,0,0.398282546508734,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0.156998727841375,0.246794327843601,0,0.166845105716094,0,0.449724224769707,0,0.72353147925725,0,0.863088412352432,1.13494658742525,0.549122826376163,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0.369506380333209,0,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0.714130922658041,0.195133647857799,0.472905432318573,0.44292937929755,0.318909537314974,0.327726629431476,0.518054945597687,0.433947175744535,6.03165135757089,3.26343410291226,0,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.162886959353576,0.164970122972535,1.32745138339963,0.242780636154981,0,0,0,0,0.258428293168221,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0.23467170806371,0,0,0.16488625294148,0,0.0603129249281559,0.358117032009409,0,0.582961673259701,0,2.05045056957423,1.03193433981611,2.03713980106683,0.941842285023455,1.6403307326523,2.28778173206523,1.35982743995084,4.19854356970974,2.62579950228405,0.954670618015114,0,0,0,0,0.218362563746178,0.134864346384821,0.41326727862668,0.26175594198403,0.388844919875379,0.621339313086926,0,0,0,0,0.387479470433193,0,0,0.2604087696879,0,0,0,0.948033361884535,1.21635129174099,0.410843828659309,0.25984164595559,0.537080087002444,0,0.120195449519969,0.295379054349154,0.201932899896295,0.381034033274999,0.302478555410522,0.292373642219257,0.673482891482306,0.584384510907845,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0.572895513439397,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0.25347929989024,0.188626341386076,0,0.192075457214608,0.17230640686684,0,0.115884325944855,0,0.412085900803307,0,0,0,0,0,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0.441182838239031,0.695603506861264 | |phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0.563154888606667,0.468129052643987,0.34243593645101,0.319088635981346,1.02720437958723,0.0874204024189974,0.999329285446988,1.21485160433896,0.699561878128147,4.10100814965709,5.34746291062381,4.66828616977833,0.255129870453209,1.39007331681239,0.783599367416806,0.47997726838022,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,20.9265815368454,7.813353445238,18.8468547830567,24.1174910092716,21.1744100337118,27.6740901227758,0,0,0,0,0,0,0,0,0,3.6912173332702,0,0.336093799142464,0,0,0,0.202316460859598,0,0,0,0,2.6996991518442,3.9554654502679,8.5257613793532,2.69640099466564,1.53687322128622,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.11418387971906,3.10725460376606,0.148442139064825,0,0,0.461230994512117,0.150722640552623,0.117588707135705,0,0,0,6.19227386364912,0,1.54589062922275,2.90925151881133,0,0,0.209446706813455,0,1.67741174308288,3.59941638596045,1.90605340609597,0,0,0,0.173824320192276,0.255715457330331,0.20778804455956,0.162241263067758,0,1.99051152976149,0,0,0.130120442962704,0,0,0,0.0680364991513279,0,0,0,0.215567992932842,0.189106080167819,0,0.219195732427575,0,0,0,0,5.61770549850588,3.3455227924913,1.98914449576915,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0.0810688095458557,0.292399974850665,0,0.134206418760372,0,0,0,0.528901133327089,0,0,0,0.201683524623343,0,0.190225626112559,0.474529061544512,0,0.502670417600539,0.198956472041151,0.38992817423824,0,0,0.398282546508734,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0.156998727841375,0.246794327843601,0,0.166845105716094,0,0.449724224769707,0,0.72353147925725,0,0.863088412352432,1.13494658742525,0.549122826376163,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0.369506380333209,0,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0.714130922658041,0.195133647857799,0.472905432318573,0.44292937929755,0.318909537314974,0.327726629431476,0.518054945597687,0.433947175744535,6.03165135757089,3.26343410291226,0,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.162886959353576,0.164970122972535,1.32745138339963,0.242780636154981,0,0,0,0,0.258428293168221,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0.23467170806371,0,0,0.16488625294148,0,0.0603129249281559,0.358117032009409,0,0.582961673259701,0,2.05045056957423,1.03193433981611,2.03713980106683,0.941842285023455,1.6403307326523,2.28778173206523,1.35982743995084,4.19854356970974,2.62579950228405,0.954670618015114,0,0,0,0,0.218362563746178,0.134864346384821,0.41326727862668,0.26175594198403,0.388844919875379,0.621339313086926,0,0,0,0,0.387479470433193,0,0,0.2604087696879,0,0,0,0.948033361884535,1.21635129174099,0.410843828659309,0.25984164595559,0.537080087002444,0,0.120195449519969,0.295379054349154,0.201932899896295,0.381034033274999,0.302478555410522,0.292373642219257,0.673482891482306,0.584384510907845,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0.572895513439397,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0.25347929989024,0.188626341386076,0,0.192075457214608,0.17230640686684,0,0.115884325944855,0,0.412085900803307,0,0,0,0,0,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0.441182838239031,0.695603506861264 | ||
|short_description=p6@Psd4 | |||
}} | }} |
Latest revision as of 09:40, 26 September 2015
Short description: | p6@Psd4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Psd4_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | -199bp_to_ENSMUST00000127242_5end |
EntrezGene: | Psd4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 7.62e-20 | 19 |
hematopoietic cell | 9.11e-16 | 32 |
hematopoietic oligopotent progenitor cell | 9.11e-16 | 32 |
hematopoietic stem cell | 9.11e-16 | 32 |
hematopoietic multipotent progenitor cell | 9.11e-16 | 32 |
granulocyte monocyte progenitor cell | 6.91e-15 | 7 |
myeloid cell | 8.10e-15 | 16 |
connective tissue cell | 1.82e-14 | 46 |
mesenchymal cell | 1.82e-14 | 46 |
motile cell | 1.31e-11 | 54 |
myeloid lineage restricted progenitor cell | 8.49e-10 | 13 |
stem cell | 1.65e-09 | 97 |
monopoietic cell | 4.14e-09 | 4 |
myeloid leukocyte | 4.14e-09 | 4 |
phagocyte | 4.14e-09 | 4 |
monocyte | 4.14e-09 | 4 |
macrophage | 4.14e-09 | 4 |
tissue-resident macrophage | 4.14e-09 | 4 |
macrophage dendritic cell progenitor | 4.14e-09 | 4 |
monoblast | 4.14e-09 | 4 |
promonocyte | 4.14e-09 | 4 |
hematopoietic lineage restricted progenitor cell | 2.52e-08 | 25 |
bone marrow cell | 1.10e-07 | 3 |
mesenchymal stem cell of the bone marrow | 1.10e-07 | 3 |
somatic stem cell | 1.25e-07 | 91 |
multi fate stem cell | 1.25e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
bone element | 6.58e-26 | 22 |
skeletal element | 6.58e-26 | 22 |
skeletal system | 6.58e-26 | 22 |
bone marrow | 7.45e-25 | 16 |
musculoskeletal system | 3.41e-24 | 32 |
hemolymphoid system | 9.78e-17 | 48 |
immune system | 9.78e-17 | 48 |
hematopoietic system | 2.55e-16 | 45 |
blood island | 2.55e-16 | 45 |
connective tissue | 1.82e-14 | 46 |
lateral plate mesoderm | 9.42e-10 | 87 |
spleen | 2.50e-08 | 6 |
cavity lining | 2.50e-08 | 6 |
serous membrane | 2.50e-08 | 6 |
gastrointestinal system mesentery | 2.50e-08 | 6 |
stomach region | 2.50e-08 | 6 |
mesentery | 2.50e-08 | 6 |
gastrointestinal system serosa | 2.50e-08 | 6 |
mesentery of stomach | 2.50e-08 | 6 |
gut mesentery | 2.50e-08 | 6 |
dorsal mesentery | 2.50e-08 | 6 |
dorsal mesogastrium | 2.50e-08 | 6 |
peritoneal cavity | 2.50e-08 | 6 |
spleen primordium | 2.50e-08 | 6 |
mesoderm | 5.50e-08 | 120 |
mesoderm-derived structure | 5.50e-08 | 120 |
presumptive mesoderm | 5.50e-08 | 120 |
intraembryonic coelom | 8.15e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.67e-08 | 3 |
muscle cancer | 2.67e-08 | 3 |