FFCP PHASE1:Mm9::chr2:25562346..25562433,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=107771 | |EntrezGene=107771 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3336 | |||
|TSSclassifier=NA | |||
|UniProt=Q6P8Z1,A0PJL6 | |UniProt=Q6P8Z1,A0PJL6 | ||
|association_with_transcript=0bp_to_ENSMUST00000061483,NM_023326,uc008itg.1_5end | |association_with_transcript=0bp_to_ENSMUST00000061483,NM_023326,uc008itg.1_5end | ||
|cluster_id=chr2:25562346..25562433,+ | |||
|description=CAGE_peak_1_at_Bmyc_5end | |description=CAGE_peak_1_at_Bmyc_5end | ||
|id=chr2:25562346..25562433,+ | |id=chr2:25562346..25562433,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.90e-10!23;CL:0000337!1.90e-10!23;CL:0000540!3.14e-10!33;CL:0000047!3.14e-10!33;CL:0000031!3.14e-10!33;CL:0000404!3.14e-10!33;CL:0000393!2.19e-08!39;CL:0000211!2.19e-08!39;CL:0000221!2.83e-08!44;CL:0000133!2.83e-08!44;CL:0002319!4.18e-08!43;CL:0000055!7.08e-07!50 | |ontology_enrichment_celltype=CL:0000117!1.90e-10!23;CL:0000337!1.90e-10!23;CL:0000540!3.14e-10!33;CL:0000047!3.14e-10!33;CL:0000031!3.14e-10!33;CL:0000404!3.14e-10!33;CL:0000393!2.19e-08!39;CL:0000211!2.19e-08!39;CL:0000221!2.83e-08!44;CL:0000133!2.83e-08!44;CL:0002319!4.18e-08!43;CL:0000055!7.08e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.89e-10,23;CL:0000337,1.89e-10,23;CL:0000540,3.14e-10,33;CL:0000047,3.14e-10,33;CL:0000031,3.14e-10,33;CL:0000404,3.14e-10,33;CL:0000393,2.19e-08,39;CL:0000211,2.19e-08,39;CL:0000221,2.82e-08,44;CL:0000133,2.82e-08,44;CL:0002319,4.18e-08,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.14e-23!73;UBERON:0005743!7.14e-23!73;UBERON:0002346!8.03e-22!71;UBERON:0003075!8.03e-22!71;UBERON:0007284!8.03e-22!71;UBERON:0000073!1.19e-21!75;UBERON:0001016!1.19e-21!75;UBERON:0001049!2.31e-19!52;UBERON:0005068!2.31e-19!52;UBERON:0006241!2.31e-19!52;UBERON:0007135!2.31e-19!52;UBERON:0004121!7.42e-19!102;UBERON:0000924!7.42e-19!102;UBERON:0006601!7.42e-19!102;UBERON:0000955!2.74e-17!50;UBERON:0006238!2.74e-17!50;UBERON:0002616!9.29e-17!49;UBERON:0000033!4.49e-16!63;UBERON:0003080!3.07e-15!40;UBERON:0002780!8.81e-15!39;UBERON:0001890!8.81e-15!39;UBERON:0006240!8.81e-15!39;UBERON:0003056!1.30e-14!49;UBERON:0002020!7.60e-14!34;UBERON:0002791!1.15e-10!29;UBERON:0003528!1.15e-10!29;UBERON:0001893!1.15e-10!29;UBERON:0000153!1.01e-09!94;UBERON:0007811!3.14e-08!86;UBERON:0000956!2.82e-07!21;UBERON:0001869!2.82e-07!21;UBERON:0000203!2.82e-07!21 | |ontology_enrichment_uberon=UBERON:0001017!7.14e-23!73;UBERON:0005743!7.14e-23!73;UBERON:0002346!8.03e-22!71;UBERON:0003075!8.03e-22!71;UBERON:0007284!8.03e-22!71;UBERON:0000073!1.19e-21!75;UBERON:0001016!1.19e-21!75;UBERON:0001049!2.31e-19!52;UBERON:0005068!2.31e-19!52;UBERON:0006241!2.31e-19!52;UBERON:0007135!2.31e-19!52;UBERON:0004121!7.42e-19!102;UBERON:0000924!7.42e-19!102;UBERON:0006601!7.42e-19!102;UBERON:0000955!2.74e-17!50;UBERON:0006238!2.74e-17!50;UBERON:0002616!9.29e-17!49;UBERON:0000033!4.49e-16!63;UBERON:0003080!3.07e-15!40;UBERON:0002780!8.81e-15!39;UBERON:0001890!8.81e-15!39;UBERON:0006240!8.81e-15!39;UBERON:0003056!1.30e-14!49;UBERON:0002020!7.60e-14!34;UBERON:0002791!1.15e-10!29;UBERON:0003528!1.15e-10!29;UBERON:0001893!1.15e-10!29;UBERON:0000153!1.01e-09!94;UBERON:0007811!3.14e-08!86;UBERON:0000956!2.82e-07!21;UBERON:0001869!2.82e-07!21;UBERON:0000203!2.82e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.11e-23,73;UBERON:0001016,1.19e-21,75;UBERON:0000073,3.90e-20,54;UBERON:0001049,2.30e-19,52;UBERON:0005068,2.30e-19,52;UBERON:0006241,2.30e-19,52;UBERON:0007135,2.30e-19,52;UBERON:0002346,4.12e-19,64;UBERON:0003075,4.12e-19,64;UBERON:0007284,4.12e-19,64;UBERON:0004121,3.33e-16,95;UBERON:0000924,3.33e-16,95;UBERON:0006601,3.33e-16,95;UBERON:0010314,4.18e-16,92;UBERON:0000955,4.31e-16,47;UBERON:0006238,4.31e-16,47;UBERON:0002616,1.43e-15,46;UBERON:0010371,2.85e-15,73;UBERON:0003080,3.06e-15,40;UBERON:0002780,8.79e-15,39;UBERON:0001890,8.79e-15,39;UBERON:0006240,8.79e-15,39;UBERON:0003056,1.30e-14,49;UBERON:0002020,7.59e-14,34;UBERON:0003528,1.15e-10,29;UBERON:0002791,1.15e-10,29;UBERON:0001893,1.15e-10,29;UBERON:0000956,2.81e-07,21;UBERON:0001869,2.81e-07,21;UBERON:0000203,2.81e-07,21 | |||
|phase1_expression=34.2718532804259,1.04692622291808,3.63999391511629,0,0.500895729946347,4.36486106970913,3.97141489012394,59.3967287831251,12.5301962714983,16.3845168425395,16.4369249496485,13.4814948702119,15.4080656938085,16.5224560571905,2.99798785634096,4.45445588257617,2.79824751251259,20.1895785829272,18.6475629703805,16.1268067683251,18.1142208021779,13.007114607316,18.2839852397255,11.9994317095055,11.9292826154928,3.44539178469012,5.59990595006797,4.74036711908956,3.80046838912748,4.28451220591882,6.65191531965914,0,0,0,4.62162591602039,11.3039558843775,6.53341940039581,0.418531630736908,1.5626706890476,1.0470474879476,0,0,0.971020706062307,11.5825072537531,10.5432008468295,13.7660064121261,56.3321767930588,4.14247797122848,14.4992880604751,10.6936444490856,7.41928034614421,10.062679505548,13.2548258785612,15.2326049822382,8.06625117941913,17.2363822144084,11.4613375975503,18.5641953219879,44.1049884673923,65.06589045046,44.3681982454325,21.0083609882862,16.8966011261116,16.6481447697059,26.6993917893083,19.1829631035447,49.4340182355368,59.553837324841,27.5814368740551,30.7813539396255,28.604194743788,78.8396716954498,72.6657499730808,26.3355218312151,22.6195311603038,37.6879702510109,42.9451935897616,34.9863306353414,41.3201574459295,46.5558595687584,51.2330804173494,45.8403766089949,35.4562408731754,48.9603470727562,40.1859391653011,71.5947462701013,69.3350085491631,58.7158254349697,8.32988126665025,10.9578762154839,57.1033042742305,18.0689014166091,3.39985666853875,6.47643829965381,0.649776417447669,0.896053774194671,11.9377757111989,0.170430322578058,0,0,26.901093177346,0,0,0,8.01016851741492,7.85415582972806,7.58286667522175,7.65031994117702,19.4203412735379,24.3445108066313,39.9016251562112,49.627872964879,51.6578713853571,46.5732959307604,32.8072492908616,22.9969862133306,7.16865406429684,15.3275318335106,7.96149496754887,10.3530783966342,5.74187947997023,5.33362778448744,7.45567044872489,27.2286141220739,20.7352239745321,8.43008282188352,16.0552266837933,29.395233818677,16.2649890653523,44.787401182042,39.8025524452205,49.0051973240171,56.3190797422976,46.2844977767898,47.1678861150201,35.0441128226357,31.6720421574484,48.2699045967161,217.594295011394,9.89076722666428,28.6264974517948,27.1284483231498,28.2697543794398,18.2352829581215,16.8730517895293,19.4732854832972,19.5836604329833,16.298312356558,34.0597428833891,30.2569728268511,32.1990557220026,40.3320147666738,26.6925359256574,25.4224081561182,18.7261744131229,61.7006227137329,13.3420505589515,19.3010930336036,14.7765019685708,22.7838349789052,23.4526059981096,15.1252131627252,21.5437709382541,13.7734962223183,13.1127045954272,13.7195027402741,12.8771232671817,8.64063533517054,12.1774288935976,9.85004784474571,7.21512404958116,9.0643992203706,8.34290438105992,6.97873377553933,48.1563982211851,43.3228418116787,1.32167513193519,5.81791246659797,28.5806255717213,26.2427439202296,32.6034677144896,21.781820659321,19.7916459021935,15.7887269673424,5.69434873853414,11.6936257854048,10.5560787696113,9.35095418593409,11.307917052909,13.4822911298133,5.18731319699266,6.37252074413975,49.1239863468482,24.2206846732625,42.8289395557706,19.5505274731502,25.6017283061266,14.5882505371863,10.8766843853723,9.00421902675573,5.18095801876537,7.03363834354263,4.44678940630723,11.1786220829783,7.46924181430171,5.17182858485164,4.46292267054706,6.27060615356284,7.89340140522401,4.31544206176216,2.43202840162553,4.11842119782122,1.43768206527355,7.07067800570156,7.48890415474945,5.05157755894223,5.20252499213545,3.37710464954357,15.5192679739948,26.1498148243269,22.9780616783256,19.3509397783714,13.8467246490216,19.4307258632506,14.7587057349329,13.6593553500459,12.7684466726015,12.1805579306826,14.6698387164888,12.7813385478276,13.9874835311375,9.11289069063523,1.50791283939272,2.71952841909355,5.4094070032094,10.4855963595798,35.0000286173386,32.8192722458169,0,7.06918596172244,21.7700671397217,21.0836921920185,24.3428439438063,15.7719406648684,15.1503098376028,17.8338214396964,29.1463705205924,27.4720506436633,18.1832377855401,48.8408400961147,28.9557773824868,65.5281421495499,40.721739838394,18.6416238958965,3.98235415019888,34.9604116063173,31.1393263673694,28.1021568836288,36.6174347172158,22.7502009478506,17.573123935439,18.1766864738753,16.0423820273125,9.48110273807448,10.5418608574999,10.3135543248187,91.2378143420152,26.2889197285713,41.9122135456125,34.9369367101495,36.3547478966661,39.0627710548535,48.5419610776257,65.7644290087534,7.97883807416615,9.74427525973573,18.3038570385618,6.10079135883476,10.6566521619298,10.434136012571,7.5204576721976,6.56563598980245,5.53813589596716,43.9457965764908,13.6696704638282,15.4790150972417,10.3708935327039,4.89757988212197,5.87785179200408,8.69357058184786,9.5187920796559,14.8348539463077,10.7795979567451,38.1868247206045,30.368255383789,29.8879616676468,18.468913280528,16.936151977172,15.0670168984863,16.1837215661785,13.4725132832298,17.53764811293,5.83267379813068,11.1841076355647,7.328008202894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|phase1_expression=34.2718532804259,1.04692622291808,3.63999391511629,0,0.500895729946347,4.36486106970913,3.97141489012394,59.3967287831251,12.5301962714983,16.3845168425395,16.4369249496485,13.4814948702119,15.4080656938085,16.5224560571905,2.99798785634096,4.45445588257617,2.79824751251259,20.1895785829272,18.6475629703805,16.1268067683251,18.1142208021779,13.007114607316,18.2839852397255,11.9994317095055,11.9292826154928,3.44539178469012,5.59990595006797,4.74036711908956,3.80046838912748,4.28451220591882,6.65191531965914,0,0,0,4.62162591602039,11.3039558843775,6.53341940039581,0.418531630736908,1.5626706890476,1.0470474879476,0,0,0.971020706062307,11.5825072537531,10.5432008468295,13.7660064121261,56.3321767930588,4.14247797122848,14.4992880604751,10.6936444490856,7.41928034614421,10.062679505548,13.2548258785612,15.2326049822382,8.06625117941913,17.2363822144084,11.4613375975503,18.5641953219879,44.1049884673923,65.06589045046,44.3681982454325,21.0083609882862,16.8966011261116,16.6481447697059,26.6993917893083,19.1829631035447,49.4340182355368,59.553837324841,27.5814368740551,30.7813539396255,28.604194743788,78.8396716954498,72.6657499730808,26.3355218312151,22.6195311603038,37.6879702510109,42.9451935897616,34.9863306353414,41.3201574459295,46.5558595687584,51.2330804173494,45.8403766089949,35.4562408731754,48.9603470727562,40.1859391653011,71.5947462701013,69.3350085491631,58.7158254349697,8.32988126665025,10.9578762154839,57.1033042742305,18.0689014166091,3.39985666853875,6.47643829965381,0.649776417447669,0.896053774194671,11.9377757111989,0.170430322578058,0,0,26.901093177346,0,0,0,8.01016851741492,7.85415582972806,7.58286667522175,7.65031994117702,19.4203412735379,24.3445108066313,39.9016251562112,49.627872964879,51.6578713853571,46.5732959307604,32.8072492908616,22.9969862133306,7.16865406429684,15.3275318335106,7.96149496754887,10.3530783966342,5.74187947997023,5.33362778448744,7.45567044872489,27.2286141220739,20.7352239745321,8.43008282188352,16.0552266837933,29.395233818677,16.2649890653523,44.787401182042,39.8025524452205,49.0051973240171,56.3190797422976,46.2844977767898,47.1678861150201,35.0441128226357,31.6720421574484,48.2699045967161,217.594295011394,9.89076722666428,28.6264974517948,27.1284483231498,28.2697543794398,18.2352829581215,16.8730517895293,19.4732854832972,19.5836604329833,16.298312356558,34.0597428833891,30.2569728268511,32.1990557220026,40.3320147666738,26.6925359256574,25.4224081561182,18.7261744131229,61.7006227137329,13.3420505589515,19.3010930336036,14.7765019685708,22.7838349789052,23.4526059981096,15.1252131627252,21.5437709382541,13.7734962223183,13.1127045954272,13.7195027402741,12.8771232671817,8.64063533517054,12.1774288935976,9.85004784474571,7.21512404958116,9.0643992203706,8.34290438105992,6.97873377553933,48.1563982211851,43.3228418116787,1.32167513193519,5.81791246659797,28.5806255717213,26.2427439202296,32.6034677144896,21.781820659321,19.7916459021935,15.7887269673424,5.69434873853414,11.6936257854048,10.5560787696113,9.35095418593409,11.307917052909,13.4822911298133,5.18731319699266,6.37252074413975,49.1239863468482,24.2206846732625,42.8289395557706,19.5505274731502,25.6017283061266,14.5882505371863,10.8766843853723,9.00421902675573,5.18095801876537,7.03363834354263,4.44678940630723,11.1786220829783,7.46924181430171,5.17182858485164,4.46292267054706,6.27060615356284,7.89340140522401,4.31544206176216,2.43202840162553,4.11842119782122,1.43768206527355,7.07067800570156,7.48890415474945,5.05157755894223,5.20252499213545,3.37710464954357,15.5192679739948,26.1498148243269,22.9780616783256,19.3509397783714,13.8467246490216,19.4307258632506,14.7587057349329,13.6593553500459,12.7684466726015,12.1805579306826,14.6698387164888,12.7813385478276,13.9874835311375,9.11289069063523,1.50791283939272,2.71952841909355,5.4094070032094,10.4855963595798,35.0000286173386,32.8192722458169,0,7.06918596172244,21.7700671397217,21.0836921920185,24.3428439438063,15.7719406648684,15.1503098376028,17.8338214396964,29.1463705205924,27.4720506436633,18.1832377855401,48.8408400961147,28.9557773824868,65.5281421495499,40.721739838394,18.6416238958965,3.98235415019888,34.9604116063173,31.1393263673694,28.1021568836288,36.6174347172158,22.7502009478506,17.573123935439,18.1766864738753,16.0423820273125,9.48110273807448,10.5418608574999,10.3135543248187,91.2378143420152,26.2889197285713,41.9122135456125,34.9369367101495,36.3547478966661,39.0627710548535,48.5419610776257,65.7644290087534,7.97883807416615,9.74427525973573,18.3038570385618,6.10079135883476,10.6566521619298,10.434136012571,7.5204576721976,6.56563598980245,5.53813589596716,43.9457965764908,13.6696704638282,15.4790150972417,10.3708935327039,4.89757988212197,5.87785179200408,8.69357058184786,9.5187920796559,14.8348539463077,10.7795979567451,38.1868247206045,30.368255383789,29.8879616676468,18.468913280528,16.936151977172,15.0670168984863,16.1837215661785,13.4725132832298,17.53764811293,5.83267379813068,11.1841076355647,7.328008202894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| ||
|short_description=p1@Bmyc | |short_description=p1@Bmyc | ||
}} | }} |
Latest revision as of 10:39, 26 September 2015
Short description: | p1@Bmyc |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Bmyc_5end |
Coexpression cluster: | MCL_coexpression_mm9:3336 |
Association with transcript: | 0bp_to_ENSMUST00000061483, NM_023326, uc008itg.1_5end |
EntrezGene: | Bmyc |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.89e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.89e-10 | 23 |
neuron | 3.14e-10 | 33 |
neuronal stem cell | 3.14e-10 | 33 |
neuroblast | 3.14e-10 | 33 |
electrically signaling cell | 3.14e-10 | 33 |
electrically responsive cell | 2.19e-08 | 39 |
electrically active cell | 2.19e-08 | 39 |
ectodermal cell | 2.82e-08 | 44 |
neurectodermal cell | 2.82e-08 | 44 |
neural cell | 4.18e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 7.11e-23 | 73 |
nervous system | 1.19e-21 | 75 |
regional part of nervous system | 3.90e-20 | 54 |
neural tube | 2.30e-19 | 52 |
neural rod | 2.30e-19 | 52 |
future spinal cord | 2.30e-19 | 52 |
neural keel | 2.30e-19 | 52 |
neurectoderm | 4.12e-19 | 64 |
neural plate | 4.12e-19 | 64 |
presumptive neural plate | 4.12e-19 | 64 |
ectoderm-derived structure | 3.33e-16 | 95 |
ectoderm | 3.33e-16 | 95 |
presumptive ectoderm | 3.33e-16 | 95 |
structure with developmental contribution from neural crest | 4.18e-16 | 92 |
brain | 4.31e-16 | 47 |
future brain | 4.31e-16 | 47 |
regional part of brain | 1.43e-15 | 46 |
ecto-epithelium | 2.85e-15 | 73 |
anterior neural tube | 3.06e-15 | 40 |
regional part of forebrain | 8.79e-15 | 39 |
forebrain | 8.79e-15 | 39 |
future forebrain | 8.79e-15 | 39 |
pre-chordal neural plate | 1.30e-14 | 49 |
gray matter | 7.59e-14 | 34 |
brain grey matter | 1.15e-10 | 29 |
regional part of telencephalon | 1.15e-10 | 29 |
telencephalon | 1.15e-10 | 29 |
cerebral cortex | 2.81e-07 | 21 |
cerebral hemisphere | 2.81e-07 | 21 |
pallium | 2.81e-07 | 21 |