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FFCP PHASE1:Mm9::chr7:27963854..27963907,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19342
|EntrezGene=19342
|HGNC=
|HGNC=
|MCL_coexpression_id=380
|TSSclassifier=NA
|UniProt=Q4V9W8,Q91ZR1,Q3USC3
|UniProt=Q4V9W8,Q91ZR1,Q3USC3
|association_with_transcript=0bp_to_ENSMUST00000128409,ENSMUST00000152753,NM_029391,uc009fvc.1,uc009fvd.1_5end
|association_with_transcript=0bp_to_ENSMUST00000128409,ENSMUST00000152753,NM_029391,uc009fvc.1,uc009fvd.1_5end
|cluster_id=chr7:27963854..27963907,-
|description=CAGE_peak_1_at_Rab4b_5end
|description=CAGE_peak_1_at_Rab4b_5end
|id=chr7:27963854..27963907,-
|id=chr7:27963854..27963907,-
|ontology_enrichment_celltype=CL:0000144!6.42e-08!121;CL:0000012!6.42e-08!121;CL:0002371!8.67e-08!118;CL:0000055!4.39e-07!50
|ontology_enrichment_celltype=CL:0000144!6.42e-08!121;CL:0000012!6.42e-08!121;CL:0002371!8.67e-08!118;CL:0000055!4.39e-07!50
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.31e-12!75;UBERON:0001016!1.31e-12!75;UBERON:0001017!3.59e-12!73;UBERON:0005743!3.59e-12!73;UBERON:0001049!5.49e-12!52;UBERON:0005068!5.49e-12!52;UBERON:0006241!5.49e-12!52;UBERON:0007135!5.49e-12!52;UBERON:0000955!2.04e-11!50;UBERON:0006238!2.04e-11!50;UBERON:0002616!2.07e-11!49;UBERON:0002020!1.69e-08!34;UBERON:0007811!5.65e-08!86;UBERON:0000064!1.22e-07!99;UBERON:0003080!2.14e-07!40;UBERON:0000033!3.45e-07!63;UBERON:0002791!3.48e-07!29;UBERON:0003528!3.48e-07!29;UBERON:0001893!3.48e-07!29;UBERON:0002780!5.30e-07!39;UBERON:0001890!5.30e-07!39;UBERON:0006240!5.30e-07!39;UBERON:0002346!6.44e-07!71;UBERON:0003075!6.44e-07!71;UBERON:0007284!6.44e-07!71
|ontology_enrichment_uberon=UBERON:0000073!1.31e-12!75;UBERON:0001016!1.31e-12!75;UBERON:0001017!3.59e-12!73;UBERON:0005743!3.59e-12!73;UBERON:0001049!5.49e-12!52;UBERON:0005068!5.49e-12!52;UBERON:0006241!5.49e-12!52;UBERON:0007135!5.49e-12!52;UBERON:0000955!2.04e-11!50;UBERON:0006238!2.04e-11!50;UBERON:0002616!2.07e-11!49;UBERON:0002020!1.69e-08!34;UBERON:0007811!5.65e-08!86;UBERON:0000064!1.22e-07!99;UBERON:0003080!2.14e-07!40;UBERON:0000033!3.45e-07!63;UBERON:0002791!3.48e-07!29;UBERON:0003528!3.48e-07!29;UBERON:0001893!3.48e-07!29;UBERON:0002780!5.30e-07!39;UBERON:0001890!5.30e-07!39;UBERON:0006240!5.30e-07!39;UBERON:0002346!6.44e-07!71;UBERON:0003075!6.44e-07!71;UBERON:0007284!6.44e-07!71
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.64e-13,54;UBERON:0001016,1.31e-12,75;UBERON:0001017,3.59e-12,73;UBERON:0001049,5.49e-12,52;UBERON:0005068,5.49e-12,52;UBERON:0006241,5.49e-12,52;UBERON:0007135,5.49e-12,52;UBERON:0000955,4.71e-10,47;UBERON:0006238,4.71e-10,47;UBERON:0002616,4.84e-10,46;UBERON:0002020,1.69e-08,34;UBERON:0002346,1.69e-07,64;UBERON:0003075,1.69e-07,64;UBERON:0007284,1.69e-07,64;UBERON:0003080,2.14e-07,40;UBERON:0003528,3.48e-07,29;UBERON:0002791,3.48e-07,29;UBERON:0001893,3.48e-07,29;UBERON:0002780,5.30e-07,39;UBERON:0001890,5.30e-07,39;UBERON:0006240,5.30e-07,39;UBERON:0004121,5.42e-07,95;UBERON:0000924,5.42e-07,95;UBERON:0006601,5.42e-07,95
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6790568,20.128627245558,17.0648438498446,19.8633881213745,23.5831568845872,23.8709893101133,24.3001159832488,31.1489570960995,34.6071978689087,18.0188400795208,64.2609950099977,19.4371509857172,18.5313509311949,22.5563378479095,18.2115351103601,20.9505595608565,20.4201595243612,21.2233147295639,23.2787744625078,41.310884661247,38.0199608260382,27.4929674946515,22.9079493277886,18.3852613325041,21.9566190832474,21.8412568714327,30.7956099910961,32.5729668199116,30.4240425979629,29.381236934911,33.6072017348549,34.3817291316626,31.9661848826388,35.6945932485622,41.2575464700938,12.2434407152214,8.87943813496259,6.19025610605382,8.39423081820392,21.8304241256375,19.8943423978253,22.8939530334081,15.2201549146137,17.0534515372024,35.0146142422581,37.7466693935885,42.9671635079547,37.1202873862365,34.2541259885321,43.0574521512129,35.7761925122857,35.1250538514892,43.5016712624836,36.7609821343792,12.1431196673487,19.1531939232495,18.7806966329548,14.8295097411659,11.528723944539,13.420576116851,14.0015438515018,14.0103838922448,11.5530915453053,13.3929522234813,15.9691958930851,13.5810965797975,14.9826411951812,17.0947156921001,15.5650120869712,12.3836359733599,14.7173093949966,14.0823730938505,13.5988347265091,13.8366984926333,12.6861623382604,14.198064492747,12.8755542571553,10.0289027476307,14.7751727252069,15.6537024599602,19.0245091787683,13.1534855718921,17.2471224584244,11.7839877048125,15.4225523561426,16.3517440743435,14.3230865109391,15.6486209597826,17.9403148212461,24.9810577937946,13.8019648982791,21.4871054048298,17.9811032144713,19.4120448825174,29.6790829594139
|phase1_expression=23.2215828301951,36.9913932097723,43.6799269813955,15.4256747766483,15.5277676283368,27.0285627778143,22.660426137766,44.0310532935775,16.04991432529,22.2361300005894,7.19115466547121,8.77493748948701,37.3217591250028,49.4799477691525,19.9865857089398,20.2475267389826,14.6907994406911,57.4141140951993,57.9994054152275,36.9218997064286,35.1228788323918,31.9716862866851,30.2991755401165,40.9580602351121,47.258311899837,39.0477735598214,39.1993416504758,41.5859479083766,37.8146604718184,27.4712841438325,43.2374495777844,11.4305521222734,9.22597181376855,15.8481681015439,15.3091358468176,16.7896991812077,13.271008157054,142.719286081286,121.888313745713,120.933984857947,155.881344328219,155.051325085567,154.877802616938,26.0606413209445,26.5607559795128,29.0003868415457,120.488267029598,58.8667922227206,68.5420890131552,55.2180913370965,53.6147994825138,51.7509231713898,74.9988249078082,49.3246256567714,49.0696946747997,39.1034342774639,37.5358806319771,30.9403255366465,44.1049884673923,40.2033144246745,36.7622214033584,67.4300618817573,55.1362773588906,85.0405232830922,80.0981753679249,94.4938552878313,66.5112245350858,80.3016258122049,19.0788886647599,22.4109857630606,22.2944459032465,56.5588949119531,48.1493419274518,22.7832886539815,23.6738313415044,23.8996884518605,44.0463523997555,55.9270540813122,51.3045821075853,33.4991170834692,42.0843160571084,32.2966289745191,78.1712397203867,50.6486349028512,48.4370445452488,25.3380583507354,31.7488848182,34.8566963693312,29.4574892066086,36.5766350916842,17.6817338108023,21.5105969245347,8.83962733820076,15.6513925574967,19.4932925234301,13.4408066129201,24.0159958425296,33.0634825801432,31.9536785661529,32.5072408549513,17.8871143116384,19.2489716121477,25.4805239706646,28.4426681261332,20.1336668140429,19.7620695070577,17.1878311305026,21.009833868307,57.7431480533193,29.688427812965,16.654591369549,18.8768596553528,20.0635482612771,19.8953885529462,19.1669592631199,31.0396480584298,20.2699873542187,17.930320258069,30.9613693182456,24.4267943420588,20.9799442537374,18.4252596191384,22.3670113461747,33.9625724533395,49.0105293943485,36.5303588948286,25.6404366442669,25.1959147017231,30.3697842704625,48.5321671671626,32.4825428001225,21.6125485634127,41.5440125259541,41.1701886301832,44.0510654466267,40.5603157669394,20.9789089531652,27.6183474754407,54.0826703048064,17.6771158944638,11.9710807525687,18.3921683546778,16.2055916824814,16.2761203262572,18.7100372666152,20.2419678050063,19.6773621575431,20.1788629176432,15.9520314770303,10.7790465695657,14.2520410572799,19.9468116509093,11.3999372182495,17.4126083261083,14.404749548556,12.7381930763836,25.2796747432765,25.4774428043568,27.5638594413725,20.5054514810147,16.8858763186389,14.4049649168812,17.2823656977203,14.3637889175605,12.9584374825398,13.7195027402741,15.8281306825775,17.5148013550754,17.114224391002,17.8942535846214,13.8627664323413,14.4737987551079,15.8076083009556,13.1522290385164,47.5255283754928,23.2564423977183,56.8320306732133,19.8337924997658,13.4371597837197,12.3085436086032,15.8506977426175,19.5633018884642,21.5706702529524,25.6804595251955,30.3698599388487,25.3636390274977,28.903549012031,36.8069473276129,31.7791462004166,29.6610404855893,30.4754650323319,30.0703322614094,17.8287826895897,14.6238096140453,10.1436962105772,12.4227309985642,18.2315337937568,18.2353131714828,19.2871438228985,21.2558613090627,19.3108435244891,21.2243121945497,13.0439155918346,10.3443965543978,9.43483176543374,12.5922782935518,11.5630269191447,13.2647437863829,14.5136735515409,11.5078454980324,15.2407113168533,17.0228076176611,14.3768206527355,23.4448797031157,16.2259590019572,18.4382580901392,12.9166137735777,24.6046195895317,24.5721742921584,16.2962614122617,14.6668478797823,15.4468028055421,14.0814148973101,18.7607008334834,20.9478403979692,30.4408490658166,19.8620281573801,27.0186921371505,29.1802226643201,23.9240439484977,34.1916264094473,33.8478797080737,37.6978209848181,48.9515115436839,13.277635371514,16.5562047782839,58.9220665255196,62.8254640134209,30.819769730815,15.6531974866711,16.0909191902291,13.6653560503823,14.6487910458303,16.7278158566786,19.1606859710859,12.1722908239198,19.8357243820698,16.6585839009448,17.392662229647,25.0630626809009,26.8266761043628,23.8607908914122,21.1753047159649,22.9308470931824,14.6019652173959,12.624593080059,15.4185014052023,12.6365403436452,21.2617362874156,23.0576360957946,25.0675444373175,14.1778154496227,12.83390562185,11.3773232856894,10.5418608574999,10.3135543248187,28.2564872775644,11.5239100180039,24.5781499187234,19.9333442579381,20.748807336146,24.6148968290857,23.0368628842969,36.8402588428665,24.8752010547533,15.4637411730589,21.1707262132763,18.1374878235628,14.5317984026315,16.646367280171,19.218947384505,18.2196398717018,33.8117770490627,72.6867183881198,28.5354370932414,21.4642342681751,16.2971184085346,18.271740329455,20.5041341581538,25.394377225924,21.4172821792258,27.8503390124079,23.3557955729476,47.7335309007557,15.8167996790568,20.128627245558,17.0648438498446,19.8633881213745,23.5831568845872,23.8709893101133,24.3001159832488,31.1489570960995,34.6071978689087,18.0188400795208,64.2609950099977,19.4371509857172,18.5313509311949,22.5563378479095,18.2115351103601,20.9505595608565,20.4201595243612,21.2233147295639,23.2787744625078,41.310884661247,38.0199608260382,27.4929674946515,22.9079493277886,18.3852613325041,21.9566190832474,21.8412568714327,30.7956099910961,32.5729668199116,30.4240425979629,29.381236934911,33.6072017348549,34.3817291316626,31.9661848826388,35.6945932485622,41.2575464700938,12.2434407152214,8.87943813496259,6.19025610605382,8.39423081820392,21.8304241256375,19.8943423978253,22.8939530334081,15.2201549146137,17.0534515372024,35.0146142422581,37.7466693935885,42.9671635079547,37.1202873862365,34.2541259885321,43.0574521512129,35.7761925122857,35.1250538514892,43.5016712624836,36.7609821343792,12.1431196673487,19.1531939232495,18.7806966329548,14.8295097411659,11.528723944539,13.420576116851,14.0015438515018,14.0103838922448,11.5530915453053,13.3929522234813,15.9691958930851,13.5810965797975,14.9826411951812,17.0947156921001,15.5650120869712,12.3836359733599,14.7173093949966,14.0823730938505,13.5988347265091,13.8366984926333,12.6861623382604,14.198064492747,12.8755542571553,10.0289027476307,14.7751727252069,15.6537024599602,19.0245091787683,13.1534855718921,17.2471224584244,11.7839877048125,15.4225523561426,16.3517440743435,14.3230865109391,15.6486209597826,17.9403148212461,24.9810577937946,13.8019648982791,21.4871054048298,17.9811032144713,19.4120448825174,29.6790829594139
|short_description=p1@Rab4b
|short_description=p1@Rab4b
}}
}}

Latest revision as of 11:28, 26 September 2015

Short description:p1@Rab4b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rab4b_5end
Coexpression cluster:MCL_coexpression_mm9:380
Association with transcript: 0bp_to_ENSMUST00000128409, ENSMUST00000152753, NM_029391, uc009fvc.1, uc009fvd.1_5end
EntrezGene:Rab4b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rab4b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G723.22
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I536.99
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I643.68
CD326+ enterocyte, pool1.CNhs13542.11848-124I315.43
CD326+ enterocyte, pool2.CNhs13197.11849-124I415.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I727.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I822.66
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E944.03
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E716.05
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F222.24
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.19
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F18.77
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E437.32
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E849.48
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A119.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A320.25
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A514.69
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A257.41
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A458.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A636.92
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A335.12
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H231.97
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I930.30
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D140.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D247.26
GP2+ M cell, pool1.CNhs13228.11845-124H939.05
GP2+ M cell, pool2.CNhs13231.11846-124I139.20
GP2+ M cell, pool3.CNhs13240.11847-124I241.59
Ileum epithelium, pool1.CNhs13199.10252-104B937.81
Ileum epithelium, pool2.CNhs13232.10253-104C127.47
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C843.24
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I311.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G69.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F515.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F616.79
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F713.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8142.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1121.89
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3120.93
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9155.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2155.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4154.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D826.06
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D926.56
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B329.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7120.49
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C258.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B868.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C355.22
Mouse Astrocytes, donor2.CNhs12078.11552-120C453.61
Mouse Astrocytes, donor3.CNhs12107.11633-122C451.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A275.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I949.32
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A149.07
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C139.10
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E137.54
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C530.94
Mouse Granule cells, donor1.CNhs12131.11713-123C344.10
Mouse Granule cells, donor2.CNhs12357.11731-123E340.20
Mouse Granule cells, donor3.CNhs12108.11636-122C736.76
Mouse Meningeal cells, donor1.CNhs12132.11716-123C667.43
Mouse Meningeal cells, donor3.CNhs12109.11639-122D155.14
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C785.04
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E780.10
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D294.49
Mouse Microglia, donor1.CNhs12629.11718-123C866.51
Mouse Microglia, donor2.CNhs12634.11736-123E880.30
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D519.08
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F522.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D922.29
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F156.56
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D548.15
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D222.78
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F223.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D623.90
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D344.05
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F355.93
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D751.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D433.50
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F442.08
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D832.30
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E478.17
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E550.65
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I648.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D625.34
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F631.75
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E134.86
Mouse Schwann, donor1.CNhs12507.11728-123D929.46
Mouse Schwann, donor2.CNhs12573.11746-123F936.58
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G317.68
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F721.51
Mouse hepatocyte, donor1.CNhs13078.11714-123C48.84
Mouse hepatocyte, donor3.CNhs12615.11637-122C815.65
Mouse hepatocyte, donor6.CNhs13090.11822-124F419.49
Mouse hepatocyte, donor8.CNhs13091.11824-124F613.44
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A724.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I733.06
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E331.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I832.51
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G617.89
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H119.25
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I825.48
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G120.13
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G219.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G317.19
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B621.01
accessory axillary lymph node, adult.CNhs10475.1063-29H957.74
adrenal gland, adult.CNhs10508.49-24D729.69
adrenal gland, embryo E14.CNhs11038.406-44C516.65
adrenal gland, embryo E16.CNhs11004.1254-43D618.88
adrenal gland, embryo E17.CNhs11043.1263-45I120.06
adrenal gland, embryo E18.CNhs11026.1262-18F519.90
adrenal gland, neonate N00.CNhs11191.1311-23C119.17
adrenal gland, neonate N25.CNhs11223.1377-27I331.04
amnion, adult pregnant day17.5.CNhs10488.583-22A820.27
aorta, adult.CNhs10498.46-23H117.93
bone (os femoris), adult.CNhs10483.56-12G230.96
bone (os femoris), neonate N02.CNhs11227.1985-43F524.43
bone (os femoris), neonate N16.CNhs11225.1525-43A620.98
bone (os femoris), neonate N20.CNhs11195.1350-25C318.43
cecum, adult.CNhs10467.37-13H422.37
cerebellum, adult.CNhs10494.15-8B233.96
cerebellum, neonate N30.CNhs11135.1395-42I249.01
colon, adult.CNhs10468.36-18H736.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C725.64
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D125.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D430.37
corpora quadrigemina, adult.CNhs10501.16-22A448.53
corpus striatum, adult.CNhs10487.19-21D832.48
corpus striatum, neonate N00.CNhs11226.630-43F121.61
cortex, adult.CNhs10473.12-14D541.54
cortex, neonate N30.CNhs11107.1392-42F241.17
diencephalon, adult.CNhs10482.20-12F244.05
diencephalon, neonate N30.CNhs11201.1388-42B240.56
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B120.98
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A227.62
epididymis, adult.CNhs10490.58-23B254.08
eyeball, adult.CNhs10484.31-12G417.68
eyeball, embryo E12.CNhs11016.345-16C611.97
eyeball, embryo E14.CNhs10521.399-16E218.39
eyeball, embryo E15.CNhs10593.426-16C916.21
eyeball, embryo E17.CNhs11023.1261-18D416.28
eyeball, neonate N00.CNhs11207.633-15C618.71
eyeball, neonate N01.CNhs11140.1532-43E720.24
eyeball, neonate N02.CNhs11205.1551-44G819.68
eyeball, neonate N16.CNhs11188.777-19A220.18
forelimb, embryo E11.CNhs10596.335-25E215.95
forelimb, embryo E12.CNhs10600.359-14H210.78
forelimb, embryo E13.CNhs10589.384-1E214.25
forelimb, embryo E14.CNhs10577.413-26A819.95
forelimb, embryo E15.CNhs11007.437-20E711.40
forelimb, embryo E17.CNhs10598.1517-43C417.41
forelimb, embryo E18.CNhs11008.1520-43B514.40
gonad, embryo E13.CNhs11044.1564-45I612.74
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C825.28
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D225.48
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D527.56
heart, embryo E11.CNhs10586.331-24E920.51
heart, embryo E12.CNhs11015.353-12F516.89
heart, embryo E13.CNhs11013.376-3I914.40
heart, embryo E14.CNhs10597.403-26D417.28
heart, embryo E15.CNhs11017.431-16C814.36
heart, embryo E16.CNhs11021.457-17C612.96
heart, embryo E17.CNhs11025.479-18E513.72
heart, embryo E18.CNhs11030.1283-20G315.83
heart, neonate N00.CNhs11213.639-21E317.51
heart, neonate N03.CNhs11221.1349-25I217.11
heart, neonate N10.CNhs11118.749-24G117.89
heart, neonate N16.CNhs11209.782-15G113.86
heart, neonate N20.CNhs11127.821-26I614.47
heart, neonate N25.CNhs11196.1351-25D315.81
heart, neonate N30.CNhs11202.1390-42D213.15
hippocampus, adult.CNhs10478.13-16E847.53
hippocampus, neonate N00.CNhs11228.627-43G123.26
intestinal mucosa, adult.CNhs10506.860-29I356.83
intestine, adult.CNhs10496.178-9A319.83
intestine, embryo E12.CNhs11019.1251-16I513.44
intestine, embryo E13.CNhs11010.381-16D512.31
intestine, embryo E15.CNhs10602.976-16D815.85
intestine, embryo E16.CNhs10585.463-22H419.56
intestine, embryo E17.CNhs10582.482-18D321.57
intestine, embryo E18.CNhs10526.1289-20F725.68
intestine, neonate N00.CNhs11126.644-26D130.37
intestine, neonate N01.CNhs11192.1322-23E925.36
intestine, neonate N06.CNhs11102.688-20B828.90
intestine, neonate N07.CNhs11095.720-20F236.81
intestine, neonate N10.CNhs11098.755-23A531.78
intestine, neonate N20.CNhs11187.827-18D129.66
intestine, neonate N25.CNhs11121.1352-25E330.48
intestine, neonate N30.CNhs11131.1384-42G130.07
kidney, embryo E14.CNhs10606.411-4I917.83
kidney, embryo E15.CNhs10997.434-16F814.62
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I212.42
kidney, embryo E18.CNhs11001.1288-20C718.23
kidney, neonate N00.CNhs11214.646-21G718.24
kidney, neonate N10.CNhs11206.758-6D519.29
kidney, neonate N20.CNhs11113.832-19I121.26
kidney, neonate N25.CNhs11122.1353-25F319.31
kidney, neonate N30.CNhs11203.1385-42H121.22
liver, adult pregnant day01.CNhs10466.508-5B213.04
liver, embryo E12.CNhs10601.355-15F810.34
liver, embryo E13.CNhs10524.378-3H69.43
liver, embryo E14.CNhs10594.409-16E112.59
liver, embryo E15.CNhs10520.433-16D711.56
liver, embryo E16.CNhs10523.462-17F513.26
liver, embryo E17.CNhs10510.481-18A314.51
liver, embryo E18.CNhs10579.499-43G411.51
liver, neonate N00.CNhs11117.641-24F415.24
liver, neonate N03.CNhs11123.1345-25G217.02
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H223.44
liver, neonate N10.CNhs11115.751-24B916.23
liver, neonate N20.CNhs11220.823-25A318.44
liver, neonate N25.CNhs11198.1368-26H112.92
liver, neonate N30.CNhs11106.1382-42D124.60
lung, adult.CNhs10474.28-22B124.57
lung, embryo E12.CNhs10522.354-16G216.30
lung, embryo E14.CNhs10604.404-26F814.67
lung, embryo E15.CNhs11020.432-17C515.45
lung, embryo E16.CNhs10998.458-17B614.08
lung, embryo E17.CNhs10605.480-44A618.76
lung, embryo E18.CNhs10583.1287-20I620.95
lung, neonate N00.CNhs11224.640-42C630.44
lung, neonate N06.CNhs11212.683-20E519.86
lung, neonate N07.CNhs11111.715-19A327.02
lung, neonate N10.CNhs11219.750-23E629.18
lung, neonate N20.CNhs11109.822-18A423.92
lung, neonate N25.CNhs11119.1359-25C734.19
lung, neonate N30.CNhs11133.1394-42H233.85
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A137.70
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A148.95
mammary gland, adult lactating day02.CNhs10480.595-22B613.28
mammary gland, adult pregnant day19.CNhs10476.588-5H216.56
medulla oblongata, adult.CNhs10477.17-12C258.92
medulla oblongata, neonate N30.CNhs11200.1396-42A362.83
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C730.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C215.65
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E116.09
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E213.67
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E314.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D716.73
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D819.16
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D912.17
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D419.84
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D516.66
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D617.39
olfactory brain, adult.CNhs10489.18-22I925.06
ovary, adult.CNhs10507.91-2I726.83
ovary, embryo E18.CNhs11040.505-44H723.86
ovary, neonate N00.CNhs11217.1299-22I421.18
oviduct, adult pregnant day01.CNhs10500.988-6G622.93
pancreas, adult.CNhs10486.34-16E414.60
pancreas, embryo E14.CNhs11012.405-44F412.62
pancreas, embryo E15.CNhs11042.1556-45F215.42
pancreas, embryo E16.CNhs11003.460-26E512.64
pancreas, embryo E17.CNhs10599.1558-45G321.26
pancreas, embryo E18.CNhs10580.1535-43I723.06
pancreas, neonate N00.CNhs11105.645-26G925.07
pancreas, neonate N01.CNhs11138.1531-43D714.18
pancreas, neonate N02.CNhs11139.1539-43D812.83
pancreas, neonate N16.CNhs11136.787-43B611.38
pancreas, neonate N25.CNhs11094.1555-45E210.54
pancreas, neonate N30.CNhs11182.1548-44H510.31
pituitary gland, adult.CNhs10493.21-1G828.26
pituitary gland, embryo E12.CNhs11018.346-16E611.52
pituitary gland, embryo E13.CNhs11009.370-44C724.58
pituitary gland, embryo E14.CNhs11037.398-44A519.93
pituitary gland, embryo E15.CNhs10592.427-16B920.75
pituitary gland, embryo E16.CNhs11036.449-43F624.61
pituitary gland, embryo E17.CNhs11039.1265-44F523.04
pituitary gland, neonate N00.CNhs11190.1308-22E936.84
placenta, adult pregnant day10.CNhs10472.539-13I724.88
placenta, adult pregnant day17.CNhs10464.577-18G315.46
prostate, adult.CNhs10470.859-1F821.17
skin, adult.CNhs10492.30-1C318.14
skin, neonate N00.CNhs11124.650-25G414.53
skin, neonate N03.CNhs11215.662-22H316.65
skin, neonate N06.CNhs11097.693-20I519.22
skin, neonate N10.CNhs11108.762-6C418.22
small intestine, neonate N16.CNhs11114.790-21I133.81
spinal cord, adult.CNhs10505.24-13C972.69
spleen, adult.CNhs10465.25-2G228.54
spleen, embryo E16.CNhs11035.461-43C121.46
spleen, embryo E18.CNhs11011.1271-21F216.30
spleen, neonate N10.CNhs11116.752-24D118.27
spleen, neonate N20.CNhs11112.824-19H120.50
spleen, neonate N25.CNhs11099.1354-25G325.39
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C621.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C927.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D323.36
stomach, adult.CNhs10503.33-1H647.73
stomach, embryo E12.CNhs10588.356-43E315.82
stomach, embryo E15.CNhs10603.1252-16G820.13
stomach, embryo E16.CNhs11022.459-17D417.06
stomach, embryo E17.CNhs11006.1035-18D519.86
stomach, embryo E18.CNhs10999.1286-20C623.58
stomach, neonate N03.CNhs11193.1340-24B823.87
stomach, neonate N07.CNhs11210.718-18A924.30
stomach, neonate N25.CNhs11104.1355-25E431.15
stomach, neonate N30.CNhs11134.1386-42I134.61
submandibular gland, adult.CNhs10469.59-29C118.02
testis, adult.CNhs10504.57-7G564.26
testis, embryo E13.CNhs11031.389-23F519.44
testis, embryo E15.CNhs11034.443-27C518.53
testis, embryo E16.CNhs11033.470-26G522.56
testis, embryo E17.CNhs11029.486-18I518.21
testis, embryo E18.CNhs11027.503-18G520.95
testis, neonate N00.CNhs11189.1300-22B720.42
testis, neonate N07.CNhs11222.726-26I421.22
testis, neonate N10.CNhs11204.763-44D923.28
testis, neonate N20.CNhs11110.839-18H341.31
testis, neonate N30.CNhs11130.1391-42E238.02
thymus, adult.CNhs10471.38-12B527.49
thymus, embryo E14.CNhs11041.402-44I422.91
thymus, embryo E15.CNhs11005.430-45I218.39
thymus, embryo E16.CNhs11002.456-26C521.96
thymus, embryo E17.CNhs10581.478-18C121.84
thymus, embryo E18.CNhs10595.1273-19G430.80
thymus, neonate N02.CNhs11181.1541-43F832.57
thymus, neonate N03.CNhs11137.2104-43C730.42
thymus, neonate N06.CNhs11197.681-26C429.38
thymus, neonate N07.CNhs11211.713-19D333.61
thymus, neonate N10.CNhs11194.748-24E434.38
thymus, neonate N20.CNhs11186.820-7A231.97
thymus, neonate N25.CNhs11125.1362-25G735.69
thymus, neonate N30.CNhs11132.1393-42G241.26
tongue, adult.CNhs10499.32-1B412.24
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H38.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.19
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G58.39
urinary bladder, adult.CNhs10481.879-12E421.83
uterus, adult pregnant day19.CNhs10497.590-15F519.89
uterus, adult.CNhs10509.92-27E522.89
vagina, adult.CNhs10502.89-27D515.22
vesicular gland, adult.CNhs10491.51-27F817.05
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A135.01
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A237.75
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A342.97
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D737.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A434.25
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A543.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A635.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A735.13
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A843.50
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A936.76
whole body, embryo E11.CNhs11014.324-5I812.14
whole body, embryo E12.CNhs10587.857-27C919.15
whole body, embryo E13.CNhs10512.372-23H218.78
whole body, embryo E14.5.CNhs10578.420-27D214.83
whole body, embryo E14.CNhs10519.395-14B111.53
whole body, embryo E16.CNhs10514.453-14F213.42
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G514.01
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G511.55
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G513.39
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G515.97
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G514.98
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G517.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G515.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G514.72
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G514.08
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G513.60
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G513.84
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G512.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.20
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.88
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G514.78
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G515.65
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G519.02
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.15
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G517.25
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.78
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G515.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G516.35
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G514.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G515.65
whole body, embryo E17.5.CNhs10513.490-9F917.94
whole body, embryo E17.CNhs10517.475-3I524.98
whole body, embryo E18.CNhs10516.493-3B313.80
whole body, neonate N00.CNhs10525.657-19C221.49
whole body, neonate N01.CNhs10576.659-23C617.98
whole body, neonate N06.CNhs10515.692-21D119.41
whole body, neonate N10.CNhs10518.761-6B429.68





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system7.64e-1354
nervous system1.31e-1275
central nervous system3.59e-1273
neural tube5.49e-1252
neural rod5.49e-1252
future spinal cord5.49e-1252
neural keel5.49e-1252
brain4.71e-1047
future brain4.71e-1047
regional part of brain4.84e-1046
gray matter1.69e-0834
neurectoderm1.69e-0764
neural plate1.69e-0764
presumptive neural plate1.69e-0764
anterior neural tube2.14e-0740
brain grey matter3.48e-0729
regional part of telencephalon3.48e-0729
telencephalon3.48e-0729
regional part of forebrain5.30e-0739
forebrain5.30e-0739
future forebrain5.30e-0739
ectoderm-derived structure5.42e-0795
ectoderm5.42e-0795
presumptive ectoderm5.42e-0795
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