FFCP PHASE1:Mm9::chr6:113433578..113433612,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=171508 | |EntrezGene=171508 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=128 | |||
|TSSclassifier=NA | |||
|UniProt=A8C1T7,Q91XD7 | |UniProt=A8C1T7,Q91XD7 | ||
|association_with_transcript=15bp_to_NM_133930,uc009dgn.1,uc009dgo.1_5end | |association_with_transcript=15bp_to_NM_133930,uc009dgn.1,uc009dgo.1_5end | ||
|cluster_id=chr6:113433578..113433612,+ | |||
|description=CAGE_peak_3_at_Creld1_5end | |description=CAGE_peak_3_at_Creld1_5end | ||
|id=chr6:113433578..113433612,+ | |id=chr6:113433578..113433612,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.59e-10!50;CL:0002319!2.46e-08!43;CL:0000221!2.65e-08!44;CL:0000133!2.65e-08!44 | |ontology_enrichment_celltype=CL:0000055!2.59e-10!50;CL:0002319!2.46e-08!43;CL:0000221!2.65e-08!44;CL:0000133!2.65e-08!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.61e-08,43;CL:0000221,2.80e-08,44;CL:0000133,2.80e-08,44;CL:0002321,6.11e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!1.97e-17!114;UBERON:0004111!3.13e-17!122;UBERON:0000073!1.08e-16!75;UBERON:0001016!1.08e-16!75;UBERON:0001017!3.37e-16!73;UBERON:0005743!3.37e-16!73;UBERON:0004121!9.82e-13!102;UBERON:0000924!9.82e-13!102;UBERON:0006601!9.82e-13!102;UBERON:0000955!1.40e-10!50;UBERON:0006238!1.40e-10!50;UBERON:0001049!4.23e-10!52;UBERON:0005068!4.23e-10!52;UBERON:0006241!4.23e-10!52;UBERON:0007135!4.23e-10!52;UBERON:0002616!4.39e-10!49;UBERON:0002346!1.09e-08!71;UBERON:0003075!1.09e-08!71;UBERON:0007284!1.09e-08!71;UBERON:0000033!1.38e-08!63;UBERON:0003914!5.67e-08!47;UBERON:0003080!8.87e-07!40 | |ontology_enrichment_uberon=UBERON:0000025!1.97e-17!114;UBERON:0004111!3.13e-17!122;UBERON:0000073!1.08e-16!75;UBERON:0001016!1.08e-16!75;UBERON:0001017!3.37e-16!73;UBERON:0005743!3.37e-16!73;UBERON:0004121!9.82e-13!102;UBERON:0000924!9.82e-13!102;UBERON:0006601!9.82e-13!102;UBERON:0000955!1.40e-10!50;UBERON:0006238!1.40e-10!50;UBERON:0001049!4.23e-10!52;UBERON:0005068!4.23e-10!52;UBERON:0006241!4.23e-10!52;UBERON:0007135!4.23e-10!52;UBERON:0002616!4.39e-10!49;UBERON:0002346!1.09e-08!71;UBERON:0003075!1.09e-08!71;UBERON:0007284!1.09e-08!71;UBERON:0000033!1.38e-08!63;UBERON:0003914!5.67e-08!47;UBERON:0003080!8.87e-07!40 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,3.67e-17,114;UBERON:0001016,6.67e-17,75;UBERON:0004111,7.35e-17,122;UBERON:0001017,2.15e-16,73;UBERON:0004121,1.66e-13,95;UBERON:0000924,1.66e-13,95;UBERON:0006601,1.66e-13,95;UBERON:0010314,1.75e-12,92;UBERON:0000073,1.83e-11,54;UBERON:0001049,3.02e-10,52;UBERON:0005068,3.02e-10,52;UBERON:0006241,3.02e-10,52;UBERON:0007135,3.02e-10,52;UBERON:0002346,9.11e-10,64;UBERON:0003075,9.11e-10,64;UBERON:0007284,9.11e-10,64;UBERON:0000955,3.44e-09,47;UBERON:0006238,3.44e-09,47;UBERON:0010371,4.78e-09,73;UBERON:0002616,1.05e-08,46;UBERON:0003914,8.56e-08,47;UBERON:0003080,7.86e-07,40 | |||
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| ||
|short_description=p3@Creld1 | |short_description=p3@Creld1 | ||
}} | }} |
Latest revision as of 11:32, 26 September 2015
Short description: | p3@Creld1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Creld1_5end |
Coexpression cluster: | MCL_coexpression_mm9:128 |
Association with transcript: | 15bp_to_NM_133930, uc009dgn.1, uc009dgo.1_5end |
EntrezGene: | Creld1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.61e-08 | 43 |
ectodermal cell | 2.80e-08 | 44 |
neurectodermal cell | 2.80e-08 | 44 |
embryonic cell | 6.11e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
tube | 3.67e-17 | 114 |
nervous system | 6.67e-17 | 75 |
anatomical conduit | 7.35e-17 | 122 |
central nervous system | 2.15e-16 | 73 |
ectoderm-derived structure | 1.66e-13 | 95 |
ectoderm | 1.66e-13 | 95 |
presumptive ectoderm | 1.66e-13 | 95 |
structure with developmental contribution from neural crest | 1.75e-12 | 92 |
regional part of nervous system | 1.83e-11 | 54 |
neural tube | 3.02e-10 | 52 |
neural rod | 3.02e-10 | 52 |
future spinal cord | 3.02e-10 | 52 |
neural keel | 3.02e-10 | 52 |
neurectoderm | 9.11e-10 | 64 |
neural plate | 9.11e-10 | 64 |
presumptive neural plate | 9.11e-10 | 64 |
brain | 3.44e-09 | 47 |
future brain | 3.44e-09 | 47 |
ecto-epithelium | 4.78e-09 | 73 |
regional part of brain | 1.05e-08 | 46 |
epithelial tube | 8.56e-08 | 47 |
anterior neural tube | 7.86e-07 | 40 |