FFCP PHASE1:Mm9::chr9:21961282..21961325,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66268 | |EntrezGene=66268 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9CQH2,P0C1P0 | |UniProt=Q9CQH2,P0C1P0 | ||
|association_with_transcript=0bp_to_ENSMUST00000010751,ENSMUST00000123680,NM_001082532,uc009ooc.1_5end | |association_with_transcript=0bp_to_ENSMUST00000010751,ENSMUST00000123680,NM_001082532,uc009ooc.1_5end | ||
|cluster_id=chr9:21961282..21961325,+ | |||
|description=CAGE_peak_1_at_Pigyl_5end | |description=CAGE_peak_1_at_Pigyl_5end | ||
|id=chr9:21961282..21961325,+ | |id=chr9:21961282..21961325,+ | ||
|ontology_enrichment_celltype=CL:0002321!4.55e-13!70;CL:0000220!4.55e-13!70;CL:0002371!1.72e-08!118;CL:0000066!3.41e-08!25;CL:0000055!4.64e-08!50;CL:0000548!1.19e-07!115;CL:0000004!1.19e-07!115;CL:0000255!1.19e-07!115;CL:0000144!2.99e-07!121;CL:0000012!2.99e-07!121;CL:0000221!7.93e-07!44;CL:0000133!7.93e-07!44;CL:0002453!8.76e-07!8 | |ontology_enrichment_celltype=CL:0002321!4.55e-13!70;CL:0000220!4.55e-13!70;CL:0002371!1.72e-08!118;CL:0000066!3.41e-08!25;CL:0000055!4.64e-08!50;CL:0000548!1.19e-07!115;CL:0000004!1.19e-07!115;CL:0000255!1.19e-07!115;CL:0000144!2.99e-07!121;CL:0000012!2.99e-07!121;CL:0000221!7.93e-07!44;CL:0000133!7.93e-07!44;CL:0002453!8.76e-07!8 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.55e-13,70;CL:0000066,3.41e-08,25;CL:0000221,7.93e-07,44;CL:0000133,7.93e-07,44;CL:0002453,8.76e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.71e-13!73;UBERON:0005743!3.71e-13!73;UBERON:0000073!8.82e-13!75;UBERON:0001016!8.82e-13!75;UBERON:0002616!1.39e-12!49;UBERON:0000955!1.76e-12!50;UBERON:0006238!1.76e-12!50;UBERON:0001049!1.82e-12!52;UBERON:0005068!1.82e-12!52;UBERON:0006241!1.82e-12!52;UBERON:0007135!1.82e-12!52;UBERON:0002020!1.08e-09!34;UBERON:0002791!6.61e-09!29;UBERON:0003528!6.61e-09!29;UBERON:0001893!6.61e-09!29;UBERON:0003080!9.71e-09!40;UBERON:0002780!1.60e-08!39;UBERON:0001890!1.60e-08!39;UBERON:0006240!1.60e-08!39;UBERON:0000033!2.47e-08!63;UBERON:0002346!3.58e-08!71;UBERON:0003075!3.58e-08!71;UBERON:0007284!3.58e-08!71;UBERON:0004121!1.51e-07!102;UBERON:0000924!1.51e-07!102;UBERON:0006601!1.51e-07!102;UBERON:0000956!3.68e-07!21;UBERON:0001869!3.68e-07!21;UBERON:0000203!3.68e-07!21 | |ontology_enrichment_uberon=UBERON:0001017!3.71e-13!73;UBERON:0005743!3.71e-13!73;UBERON:0000073!8.82e-13!75;UBERON:0001016!8.82e-13!75;UBERON:0002616!1.39e-12!49;UBERON:0000955!1.76e-12!50;UBERON:0006238!1.76e-12!50;UBERON:0001049!1.82e-12!52;UBERON:0005068!1.82e-12!52;UBERON:0006241!1.82e-12!52;UBERON:0007135!1.82e-12!52;UBERON:0002020!1.08e-09!34;UBERON:0002791!6.61e-09!29;UBERON:0003528!6.61e-09!29;UBERON:0001893!6.61e-09!29;UBERON:0003080!9.71e-09!40;UBERON:0002780!1.60e-08!39;UBERON:0001890!1.60e-08!39;UBERON:0006240!1.60e-08!39;UBERON:0000033!2.47e-08!63;UBERON:0002346!3.58e-08!71;UBERON:0003075!3.58e-08!71;UBERON:0007284!3.58e-08!71;UBERON:0004121!1.51e-07!102;UBERON:0000924!1.51e-07!102;UBERON:0006601!1.51e-07!102;UBERON:0000956!3.68e-07!21;UBERON:0001869!3.68e-07!21;UBERON:0000203!3.68e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.69e-13,54;UBERON:0001017,3.71e-13,73;UBERON:0001016,8.82e-13,75;UBERON:0001049,1.82e-12,52;UBERON:0005068,1.82e-12,52;UBERON:0006241,1.82e-12,52;UBERON:0007135,1.82e-12,52;UBERON:0002616,2.77e-11,46;UBERON:0000955,3.45e-11,47;UBERON:0006238,3.45e-11,47;UBERON:0002020,1.08e-09,34;UBERON:0003528,6.61e-09,29;UBERON:0002791,6.61e-09,29;UBERON:0001893,6.61e-09,29;UBERON:0003080,9.71e-09,40;UBERON:0002780,1.60e-08,39;UBERON:0001890,1.60e-08,39;UBERON:0006240,1.60e-08,39;UBERON:0002346,1.58e-07,64;UBERON:0003075,1.58e-07,64;UBERON:0007284,1.58e-07,64;UBERON:0000956,3.68e-07,21;UBERON:0001869,3.68e-07,21;UBERON:0000203,3.68e-07,21;UBERON:0004121,7.40e-07,95;UBERON:0000924,7.40e-07,95;UBERON:0006601,7.40e-07,95 | |||
|phase1_expression=41.158253705932,58.976843891052,70.5248821053781,39.3203474698879,22.5403078475856,52.8819706522453,50.226717728038,17.5607719880544,1.68946466582,2.10658073689794,3.76679530096111,5.02564601670619,20.3728868618135,20.6312149708834,26.3156711834374,30.7762406432535,21.6864182219725,20.6627718309646,17.2764186343231,24.1902101524877,32.4865368377087,24.7234468490204,31.0827749075333,55.9973479776923,52.7641346454491,64.3139799808823,53.4144875237253,67.6579670633692,35.9144262772547,32.0078264795112,54.1022445998943,29.8464416526027,20.9122027778754,47.5445043046316,52.570994794732,53.5275558054345,54.5132181220525,39.3419732892693,38.2854318816662,50.2582794214846,36.4703522579229,34.8353197328807,50.9785870682711,45.8264417431101,37.3067106887814,32.304228380456,144.742398704387,102.253798342429,77.5492225052686,76.6053802352677,55.1546501203928,61.8136026769378,7.21465206048266,13.0565185562042,8.06625117941913,30.3566134522417,29.2264108737532,44.8634720281375,37.0239123373064,39.6743234454025,56.4109949120499,52.1820579386463,48.0219189900015,58.9434314819316,58.3431153914515,64.6536904600951,79.0944291768589,129.865787198685,33.2843655510213,35.9115795962297,34.703618622978,53.9880360523189,46.3823935998388,30.0102458076637,29.7120960156533,32.1726575313507,42.9451935897616,50.4364985436492,47.6180253094355,38.5107960172166,37.4184462333855,36.4639359389732,71.7500307433549,36.5795696520592,43.3947023686141,28.2843442054721,31.1793980950035,30.9423080069999,25.5954533466162,25.6187588762003,42.6100798391466,45.6024654800135,23.7989966797713,51.2718032055926,56.5305483179472,55.1073071129723,32.3022166303029,29.9957367737382,31.69389256155,38.8673531961374,35.4925417837235,44.9142670950112,40.7688383530633,56.8853362522665,25.5459428393233,24.8292668165597,24.7706978057244,32.9991412388083,9.58070169494535,27.6102378660574,27.0637109755172,33.7956680926477,37.5903260527375,32.8575356404717,27.1629913483478,42.223974686771,34.1129055473436,29.3536694547421,23.8844849026466,20.8679236432158,20.0965781798958,22.7891368973554,16.775258509631,39.2326267995473,43.7743617240121,25.5457055208591,22.0459829090893,33.5945529356308,24.9057645063207,36.2493347359671,28.8225379775735,31.0366249718775,33.0266208365325,30.6858548796397,36.1551197533635,37.8022142947875,32.9959538875025,26.6230917105599,42.2047006584237,30.5140691035387,18.0867415718158,21.8406999211799,19.9868964083938,20.4958552256572,15.7844678031081,19.8576266441517,22.9569225171336,25.6116337031625,15.3053274982318,14.1829560125864,16.0115522989193,22.1387689751851,22.5218271872734,21.5916343243743,20.7839957772023,23.0879749509452,16.8531164955176,30.3670530395364,21.3122624546694,13.8774267598786,16.1822981386956,19.4467026377896,14.678173606283,23.2181793461937,22.831532707332,18.3701816352822,24.4128795273653,22.6524764192309,25.8358964364164,24.7892870759434,32.7517990565257,42.1055963784957,41.0558715594265,37.9804165091852,38.062480690107,36.2224235575081,15.5296828002385,24.3294521330461,19.1959425481711,15.5598570146494,18.6857818917035,24.8070735286711,31.3553041821267,32.1481308130225,21.353807769503,37.7160606317985,31.9195715176342,45.1631191533412,38.6028892495858,23.3693046250098,25.0720137854645,27.2823544358483,30.9158678553523,18.8510045806053,19.1603150644237,26.2710212920455,24.2440608959532,23.0045489240245,26.4328725179395,29.6696397439,29.8297582898612,30.6024966526065,35.2778626233707,21.35617353166,22.4077254429051,13.2668646307064,24.7489348093974,14.7118067448974,18.5876871800436,17.2617682470486,18.483415852354,29.1035097979366,12.9391385874619,24.1891615984527,24.3389385029357,27.5310976962352,31.9327396069004,31.8412724099822,26.4197061938245,20.6545638829828,19.3928321966011,24.7827825231775,22.7649540839847,23.4508760418542,24.5184950112594,28.6846462350964,27.7437853626896,23.0323277234726,28.0640392837177,24.2517705779292,29.0110769534705,32.8353362980031,31.6661696272472,36.9855864996723,27.047035016047,23.730560182207,40.9404004468869,41.3757253670477,19.180388609071,32.0638077549554,27.7647233086306,22.2550084249084,21.7577631710127,19.5954414321093,20.0518806674155,25.4768877709949,19.8357243820698,22.2114452012597,22.5314033429518,28.9189184779626,20.0135520143659,38.8183015994616,28.830991805583,22.2709666012923,29.2039304347918,30.5903601555277,38.9997388484529,25.838895926558,50.2013217897314,30.1286444985049,25.8428293168221,28.7191646287229,31.3717692978555,34.7640433729398,24.2462799722497,21.6584640821192,22.8094535855038,20.1668425315067,32.4690296294714,37.2946440954971,25.7143338781297,27.1120602755147,33.2389021616284,40.7983031813563,11.4989136951218,23.3015277950202,38.5924696596183,18.3023740765043,17.7610869365496,18.2748162532312,17.7864792564673,17.3989353729765,28.2736411530955,38.0121869121545,15.036637510211,29.1005483828144,23.5197049759534,24.1111624966004,24.0581840789004,16.4720284708696,18.0177135793487,15.2547083032787,16.7221968303353,47.7335309007557,15.342295688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| |phase1_expression=41.158253705932,58.976843891052,70.5248821053781,39.3203474698879,22.5403078475856,52.8819706522453,50.226717728038,17.5607719880544,1.68946466582,2.10658073689794,3.76679530096111,5.02564601670619,20.3728868618135,20.6312149708834,26.3156711834374,30.7762406432535,21.6864182219725,20.6627718309646,17.2764186343231,24.1902101524877,32.4865368377087,24.7234468490204,31.0827749075333,55.9973479776923,52.7641346454491,64.3139799808823,53.4144875237253,67.6579670633692,35.9144262772547,32.0078264795112,54.1022445998943,29.8464416526027,20.9122027778754,47.5445043046316,52.570994794732,53.5275558054345,54.5132181220525,39.3419732892693,38.2854318816662,50.2582794214846,36.4703522579229,34.8353197328807,50.9785870682711,45.8264417431101,37.3067106887814,32.304228380456,144.742398704387,102.253798342429,77.5492225052686,76.6053802352677,55.1546501203928,61.8136026769378,7.21465206048266,13.0565185562042,8.06625117941913,30.3566134522417,29.2264108737532,44.8634720281375,37.0239123373064,39.6743234454025,56.4109949120499,52.1820579386463,48.0219189900015,58.9434314819316,58.3431153914515,64.6536904600951,79.0944291768589,129.865787198685,33.2843655510213,35.9115795962297,34.703618622978,53.9880360523189,46.3823935998388,30.0102458076637,29.7120960156533,32.1726575313507,42.9451935897616,50.4364985436492,47.6180253094355,38.5107960172166,37.4184462333855,36.4639359389732,71.7500307433549,36.5795696520592,43.3947023686141,28.2843442054721,31.1793980950035,30.9423080069999,25.5954533466162,25.6187588762003,42.6100798391466,45.6024654800135,23.7989966797713,51.2718032055926,56.5305483179472,55.1073071129723,32.3022166303029,29.9957367737382,31.69389256155,38.8673531961374,35.4925417837235,44.9142670950112,40.7688383530633,56.8853362522665,25.5459428393233,24.8292668165597,24.7706978057244,32.9991412388083,9.58070169494535,27.6102378660574,27.0637109755172,33.7956680926477,37.5903260527375,32.8575356404717,27.1629913483478,42.223974686771,34.1129055473436,29.3536694547421,23.8844849026466,20.8679236432158,20.0965781798958,22.7891368973554,16.775258509631,39.2326267995473,43.7743617240121,25.5457055208591,22.0459829090893,33.5945529356308,24.9057645063207,36.2493347359671,28.8225379775735,31.0366249718775,33.0266208365325,30.6858548796397,36.1551197533635,37.8022142947875,32.9959538875025,26.6230917105599,42.2047006584237,30.5140691035387,18.0867415718158,21.8406999211799,19.9868964083938,20.4958552256572,15.7844678031081,19.8576266441517,22.9569225171336,25.6116337031625,15.3053274982318,14.1829560125864,16.0115522989193,22.1387689751851,22.5218271872734,21.5916343243743,20.7839957772023,23.0879749509452,16.8531164955176,30.3670530395364,21.3122624546694,13.8774267598786,16.1822981386956,19.4467026377896,14.678173606283,23.2181793461937,22.831532707332,18.3701816352822,24.4128795273653,22.6524764192309,25.8358964364164,24.7892870759434,32.7517990565257,42.1055963784957,41.0558715594265,37.9804165091852,38.062480690107,36.2224235575081,15.5296828002385,24.3294521330461,19.1959425481711,15.5598570146494,18.6857818917035,24.8070735286711,31.3553041821267,32.1481308130225,21.353807769503,37.7160606317985,31.9195715176342,45.1631191533412,38.6028892495858,23.3693046250098,25.0720137854645,27.2823544358483,30.9158678553523,18.8510045806053,19.1603150644237,26.2710212920455,24.2440608959532,23.0045489240245,26.4328725179395,29.6696397439,29.8297582898612,30.6024966526065,35.2778626233707,21.35617353166,22.4077254429051,13.2668646307064,24.7489348093974,14.7118067448974,18.5876871800436,17.2617682470486,18.483415852354,29.1035097979366,12.9391385874619,24.1891615984527,24.3389385029357,27.5310976962352,31.9327396069004,31.8412724099822,26.4197061938245,20.6545638829828,19.3928321966011,24.7827825231775,22.7649540839847,23.4508760418542,24.5184950112594,28.6846462350964,27.7437853626896,23.0323277234726,28.0640392837177,24.2517705779292,29.0110769534705,32.8353362980031,31.6661696272472,36.9855864996723,27.047035016047,23.730560182207,40.9404004468869,41.3757253670477,19.180388609071,32.0638077549554,27.7647233086306,22.2550084249084,21.7577631710127,19.5954414321093,20.0518806674155,25.4768877709949,19.8357243820698,22.2114452012597,22.5314033429518,28.9189184779626,20.0135520143659,38.8183015994616,28.830991805583,22.2709666012923,29.2039304347918,30.5903601555277,38.9997388484529,25.838895926558,50.2013217897314,30.1286444985049,25.8428293168221,28.7191646287229,31.3717692978555,34.7640433729398,24.2462799722497,21.6584640821192,22.8094535855038,20.1668425315067,32.4690296294714,37.2946440954971,25.7143338781297,27.1120602755147,33.2389021616284,40.7983031813563,11.4989136951218,23.3015277950202,38.5924696596183,18.3023740765043,17.7610869365496,18.2748162532312,17.7864792564673,17.3989353729765,28.2736411530955,38.0121869121545,15.036637510211,29.1005483828144,23.5197049759534,24.1111624966004,24.0581840789004,16.4720284708696,18.0177135793487,15.2547083032787,16.7221968303353,47.7335309007557,15.342295688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| ||
|short_description=p1@Pigyl | |short_description=p1@Pigyl | ||
}} | }} |
Latest revision as of 11:54, 26 September 2015
Short description: | p1@Pigyl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pigyl_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000010751, ENSMUST00000123680, NM_001082532, uc009ooc.1_5end |
EntrezGene: | Pigyl |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.55e-13 | 70 |
epithelial cell | 3.41e-08 | 25 |
ectodermal cell | 7.93e-07 | 44 |
neurectodermal cell | 7.93e-07 | 44 |
oligodendrocyte precursor cell | 8.76e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.69e-13 | 54 |
central nervous system | 3.71e-13 | 73 |
nervous system | 8.82e-13 | 75 |
neural tube | 1.82e-12 | 52 |
neural rod | 1.82e-12 | 52 |
future spinal cord | 1.82e-12 | 52 |
neural keel | 1.82e-12 | 52 |
regional part of brain | 2.77e-11 | 46 |
brain | 3.45e-11 | 47 |
future brain | 3.45e-11 | 47 |
gray matter | 1.08e-09 | 34 |
brain grey matter | 6.61e-09 | 29 |
regional part of telencephalon | 6.61e-09 | 29 |
telencephalon | 6.61e-09 | 29 |
anterior neural tube | 9.71e-09 | 40 |
regional part of forebrain | 1.60e-08 | 39 |
forebrain | 1.60e-08 | 39 |
future forebrain | 1.60e-08 | 39 |
neurectoderm | 1.58e-07 | 64 |
neural plate | 1.58e-07 | 64 |
presumptive neural plate | 1.58e-07 | 64 |
cerebral cortex | 3.68e-07 | 21 |
cerebral hemisphere | 3.68e-07 | 21 |
pallium | 3.68e-07 | 21 |
ectoderm-derived structure | 7.40e-07 | 95 |
ectoderm | 7.40e-07 | 95 |
presumptive ectoderm | 7.40e-07 | 95 |