FFCP PHASE1:Mm9::chr17:45692642..45692663,+: Difference between revisions
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{{FFCP|EntrezGene=18037|HGNC=|MCL_coexpression_id=710|UniProt=O54910|association_with_transcript=-1bp_to_ENSMUST00000024742,NM_008690,uc008cqv.1_5end|description=CAGE_peak_1_at_Nfkbie_5end|id=chr17:45692642..45692663,+|ontology_enrichment_celltype=CL:0000063!3.74e-10!66;CL:0000988!2.03e-09!32;CL:0002032!2.03e-09!32;CL:0000037!2.03e-09!32;CL:0000566!2.03e-09!32;CL:0000837!2.03e-09!32;CL:0002320!6.17e-09!46;CL:0000134!6.17e-09!46;CL:0000738!5.21e-08!17;CL:0002087!5.21e-08!17;CL:0000838!8.83e-08!12;CL:0002031!9.76e-08!25;CL:0000219!3.26e-07!54;CL:0000084!3.93e-07!11;CL:0000827!3.93e-07!11;CL:0000791!7.12e-07!9;CL:0000789!7.12e-07!9;CL:0002420!7.12e-07!9;CL:0002419!7.12e-07!9;CL:0000790!7.12e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,1.71e-09,32;CL:0002032,1.71e-09,32;CL:0000037,1.71e-09,32;CL:0000837,1.71e-09,32;CL:0002320,3.48e-09,46;CL:0000134,3.48e-09,46;CL:0000738,5.91e-08,17;CL:0002087,5.91e-08,17;CL:0002031,7.17e-08,25;CL:0000838,8.36e-08,12;CL:0000219,2.00e-07,54;CL:0000084,3.74e-07,11;CL:0000827,3.74e-07,11;CL:0000791,6.79e-07,9;CL:0000789,6.79e-07,9;CL:0002420,6.79e-07,9;CL:0002419,6.79e-07,9;CL:0000790,6.79e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!4.30e-20!48;UBERON:0002390!1.95e-18!45;UBERON:0003061!1.95e-18!45;UBERON:0002405!9.51e-13!70;UBERON:0004177!1.20e-12!29;UBERON:0003081!5.22e-11!88;UBERON:0002370!1.05e-10!23;UBERON:0000974!1.05e-10!23;UBERON:0004807!1.05e-10!23;UBERON:0005058!1.05e-10!23;UBERON:0003351!1.05e-10!23;UBERON:0009113!1.05e-10!23;UBERON:0003295!1.05e-10!23;UBERON:0009722!1.05e-10!23;UBERON:0005562!1.05e-10!23;UBERON:0007690!1.05e-10!23;UBERON:0000072!1.06e-10!27;UBERON:0000063!3.01e-10!35;UBERON:0006562!3.11e-10!24;UBERON:0001557!3.11e-10!24;UBERON:0001042!3.11e-10!24;UBERON:0008814!3.11e-10!24;UBERON:0009145!3.11e-10!24;UBERON:0003408!7.51e-10!24;UBERON:0002204!3.64e-09!32;UBERON:0002384!6.17e-09!46;UBERON:0000065!6.39e-09!41;UBERON:0001004!2.05e-08!42;UBERON:0001474!1.47e-07!22;UBERON:0004765!1.47e-07!22;UBERON:0001434!1.47e-07!22;UBERON:0000490!8.67e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.78e-20,48;UBERON:0002405,2.78e-20,48;UBERON:0002390,1.28e-18,45;UBERON:0003061,1.28e-18,45;UBERON:0004177,7.92e-13,29;UBERON:0005057,7.92e-13,29;UBERON:0002370,7.08e-11,23;UBERON:0000974,7.08e-11,23;UBERON:0004807,7.08e-11,23;UBERON:0005058,7.08e-11,23;UBERON:0003351,7.08e-11,23;UBERON:0009113,7.08e-11,23;UBERON:0003295,7.08e-11,23;UBERON:0009722,7.08e-11,23;UBERON:0005562,7.08e-11,23;UBERON:0007690,7.08e-11,23;UBERON:0000072,7.30e-11,27;UBERON:0003081,1.71e-10,87;UBERON:0000077,1.73e-10,35;UBERON:0006562,2.12e-10,24;UBERON:0001557,2.12e-10,24;UBERON:0001042,2.12e-10,24;UBERON:0008814,2.12e-10,24;UBERON:0009145,2.12e-10,24;UBERON:0003408,5.18e-10,24;UBERON:0002384,3.48e-09,46;UBERON:0002204,3.54e-09,32;UBERON:0000065,4.80e-09,41;UBERON:0001004,1.56e-08,42;UBERON:0000926,4.58e-08,120;UBERON:0004120,4.58e-08,120;UBERON:0006603,4.58e-08,120;UBERON:0001474,1.45e-07,22;UBERON:0004765,1.45e-07,22;UBERON:0001434,1.45e-07,22;UBERON:0000490,6.95e-07,66|phase1_expression=4.00372117761985,28.2670080187882,22.7499619694768,2.11724947914781,2.00358291978539,11.7515490338323,15.1848216387092,29.569241068121,105.169175447295,84.7313585285616,20.5461561870606,22.0968880417082,29.104124088305,25.2644962990902,5.66286595086627,6.47920855647443,0.699561878128147,46.3729383076609,40.8601012145102,35.2243410992365,2.38121212422995,4.17021995043718,4.70159620450084,13.4393635146462,16.0586496747019,20.6723507081407,19.3842898271584,19.39241094173,5.70070258369122,5.04060259519861,15.0776747245607,1.90509202037889,0.61506478758457,0,0.866554859253824,0.997407872150954,0.816677425049476,10.0447591376858,4.6880120671428,11.5175223674236,25.2939539853336,23.2235464885872,13.5942898848723,9.69405498411945,10.8473316404881,6.60768307782054,7.04152209913235,1.52617609466313,1.97717564461025,1.74986909166855,2.09979632438044,0,40.100042847799,34.8173828165445,32.9371923159615,3.08711323243136,6.01720223871389,3.6097046459421,1.01158230429799,2.11596391708813,1.26766280701236,2.71075625655306,2.66788438833342,11.2487464660175,24.7216590641744,17.0515227587064,7.19040265244171,6.91592949578798,0.725827286159344,1.21505344498522,1.47227472945967,2.28520787523043,0.662605622854841,1.83736198822431,0.479227355091182,0.919218786610021,1.10115880999389,1.0214987046815,1.68967186581868,1.45074916503213,1.09785172322892,2.6045668527838,3.62937898701795,1.12552522006336,0.763991238884051,1.76777151284201,1.42371680799103,1.3047961207771,2.57469057332826,0.906858721281426,17.971598299504,3.44169550792555,0,3.2382191498269,1.94932925234301,0,3.93244376368905,2.55645483867087,1.29893002301434,3.18005617059306,2.39433813620357,5.13305909657271,2.54805239706646,0,5.62876706629157,2.53359865475099,8.59391556525132,3.65388415100992,52.5643903803759,4.15637989381509,1.90833859442749,1.52232739156071,1.61430848079241,1.50722640552623,1.058298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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18037 | |||
|HGNC= | |||
|MCL_coexpression_id=710 | |||
|TSSclassifier=NA | |||
|UniProt=O54910 | |||
|association_with_transcript=-1bp_to_ENSMUST00000024742,NM_008690,uc008cqv.1_5end | |||
|cluster_id=chr17:45692642..45692663,+ | |||
|description=CAGE_peak_1_at_Nfkbie_5end | |||
|id=chr17:45692642..45692663,+ | |||
|ontology_enrichment_celltype=CL:0000063!3.74e-10!66;CL:0000988!2.03e-09!32;CL:0002032!2.03e-09!32;CL:0000037!2.03e-09!32;CL:0000566!2.03e-09!32;CL:0000837!2.03e-09!32;CL:0002320!6.17e-09!46;CL:0000134!6.17e-09!46;CL:0000738!5.21e-08!17;CL:0002087!5.21e-08!17;CL:0000838!8.83e-08!12;CL:0002031!9.76e-08!25;CL:0000219!3.26e-07!54;CL:0000084!3.93e-07!11;CL:0000827!3.93e-07!11;CL:0000791!7.12e-07!9;CL:0000789!7.12e-07!9;CL:0002420!7.12e-07!9;CL:0002419!7.12e-07!9;CL:0000790!7.12e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.71e-09,32;CL:0002032,1.71e-09,32;CL:0000037,1.71e-09,32;CL:0000837,1.71e-09,32;CL:0002320,3.48e-09,46;CL:0000134,3.48e-09,46;CL:0000738,5.91e-08,17;CL:0002087,5.91e-08,17;CL:0002031,7.17e-08,25;CL:0000838,8.36e-08,12;CL:0000219,2.00e-07,54;CL:0000084,3.74e-07,11;CL:0000827,3.74e-07,11;CL:0000791,6.79e-07,9;CL:0000789,6.79e-07,9;CL:0002420,6.79e-07,9;CL:0002419,6.79e-07,9;CL:0000790,6.79e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.30e-20!48;UBERON:0002390!1.95e-18!45;UBERON:0003061!1.95e-18!45;UBERON:0002405!9.51e-13!70;UBERON:0004177!1.20e-12!29;UBERON:0003081!5.22e-11!88;UBERON:0002370!1.05e-10!23;UBERON:0000974!1.05e-10!23;UBERON:0004807!1.05e-10!23;UBERON:0005058!1.05e-10!23;UBERON:0003351!1.05e-10!23;UBERON:0009113!1.05e-10!23;UBERON:0003295!1.05e-10!23;UBERON:0009722!1.05e-10!23;UBERON:0005562!1.05e-10!23;UBERON:0007690!1.05e-10!23;UBERON:0000072!1.06e-10!27;UBERON:0000063!3.01e-10!35;UBERON:0006562!3.11e-10!24;UBERON:0001557!3.11e-10!24;UBERON:0001042!3.11e-10!24;UBERON:0008814!3.11e-10!24;UBERON:0009145!3.11e-10!24;UBERON:0003408!7.51e-10!24;UBERON:0002204!3.64e-09!32;UBERON:0002384!6.17e-09!46;UBERON:0000065!6.39e-09!41;UBERON:0001004!2.05e-08!42;UBERON:0001474!1.47e-07!22;UBERON:0004765!1.47e-07!22;UBERON:0001434!1.47e-07!22;UBERON:0000490!8.67e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.78e-20,48;UBERON:0002405,2.78e-20,48;UBERON:0002390,1.28e-18,45;UBERON:0003061,1.28e-18,45;UBERON:0004177,7.92e-13,29;UBERON:0005057,7.92e-13,29;UBERON:0002370,7.08e-11,23;UBERON:0000974,7.08e-11,23;UBERON:0004807,7.08e-11,23;UBERON:0005058,7.08e-11,23;UBERON:0003351,7.08e-11,23;UBERON:0009113,7.08e-11,23;UBERON:0003295,7.08e-11,23;UBERON:0009722,7.08e-11,23;UBERON:0005562,7.08e-11,23;UBERON:0007690,7.08e-11,23;UBERON:0000072,7.30e-11,27;UBERON:0003081,1.71e-10,87;UBERON:0000077,1.73e-10,35;UBERON:0006562,2.12e-10,24;UBERON:0001557,2.12e-10,24;UBERON:0001042,2.12e-10,24;UBERON:0008814,2.12e-10,24;UBERON:0009145,2.12e-10,24;UBERON:0003408,5.18e-10,24;UBERON:0002384,3.48e-09,46;UBERON:0002204,3.54e-09,32;UBERON:0000065,4.80e-09,41;UBERON:0001004,1.56e-08,42;UBERON:0000926,4.58e-08,120;UBERON:0004120,4.58e-08,120;UBERON:0006603,4.58e-08,120;UBERON:0001474,1.45e-07,22;UBERON:0004765,1.45e-07,22;UBERON:0001434,1.45e-07,22;UBERON:0000490,6.95e-07,66 | |||
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| |||
|short_description=p1@Nfkbie | |||
}} |
Latest revision as of 12:54, 26 September 2015
Short description: | p1@Nfkbie |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nfkbie_5end |
Coexpression cluster: | MCL_coexpression_mm9:710 |
Association with transcript: | -1bp_to_ENSMUST00000024742, NM_008690, uc008cqv.1_5end |
EntrezGene: | Nfkbie |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.71e-09 | 32 |
hematopoietic oligopotent progenitor cell | 1.71e-09 | 32 |
hematopoietic stem cell | 1.71e-09 | 32 |
hematopoietic multipotent progenitor cell | 1.71e-09 | 32 |
connective tissue cell | 3.48e-09 | 46 |
mesenchymal cell | 3.48e-09 | 46 |
leukocyte | 5.91e-08 | 17 |
nongranular leukocyte | 5.91e-08 | 17 |
hematopoietic lineage restricted progenitor cell | 7.17e-08 | 25 |
lymphoid lineage restricted progenitor cell | 8.36e-08 | 12 |
motile cell | 2.00e-07 | 54 |
T cell | 3.74e-07 | 11 |
pro-T cell | 3.74e-07 | 11 |
mature alpha-beta T cell | 6.79e-07 | 9 |
alpha-beta T cell | 6.79e-07 | 9 |
immature T cell | 6.79e-07 | 9 |
mature T cell | 6.79e-07 | 9 |
immature alpha-beta T cell | 6.79e-07 | 9 |