FFCP PHASE1:Mm9::chr7:29566353..29566399,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100503790 | |EntrezGene=100503790 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=177 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=133bp_to_NR_040339,uc009fzv.1_5end | |association_with_transcript=133bp_to_NR_040339,uc009fzv.1_5end | ||
|cluster_id=chr7:29566353..29566399,- | |||
|description=CAGE_peak_1_at_Gm19897_5end | |description=CAGE_peak_1_at_Gm19897_5end | ||
|id=chr7:29566353..29566399,- | |id=chr7:29566353..29566399,- | ||
|ontology_enrichment_celltype=CL:0000838!1.66e-07!12;CL:0002031!7.12e-07!25;CL:0000084!7.78e-07!11;CL:0000827!7.78e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.78e-10,25;CL:0000553,1.68e-09,6;CL:0000556,1.68e-09,6;CL:0000838,3.51e-08,12;CL:0000988,1.30e-07,32;CL:0002032,1.30e-07,32;CL:0000037,1.30e-07,32;CL:0000837,1.30e-07,32;CL:0000542,1.81e-07,13;CL:0000051,1.81e-07,13;CL:0000084,7.94e-07,11;CL:0000827,7.94e-07,11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,6.22e-08,3;DOID:4045,6.22e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!2.26e-16!48;UBERON:0004177!1.04e-14!29;UBERON:0002390!2.41e-14!45;UBERON:0003061!2.41e-14!45;UBERON:0002405!2.85e-14!70;UBERON:0005057!2.25e-11!51;UBERON:0003408!3.05e-11!24;UBERON:0006562!7.22e-11!24;UBERON:0001557!7.22e-11!24;UBERON:0001042!7.22e-11!24;UBERON:0008814!7.22e-11!24;UBERON:0009145!7.22e-11!24;UBERON:0002370!1.25e-10!23;UBERON:0000974!1.25e-10!23;UBERON:0004807!1.25e-10!23;UBERON:0005058!1.25e-10!23;UBERON:0003351!1.25e-10!23;UBERON:0009113!1.25e-10!23;UBERON:0003295!1.25e-10!23;UBERON:0009722!1.25e-10!23;UBERON:0005562!1.25e-10!23;UBERON:0007690!1.25e-10!23;UBERON:0001004!6.84e-10!42;UBERON:0000065!2.34e-09!41;UBERON:0003081!6.61e-09!88;UBERON:0000072!8.29e-09!27;UBERON:0003104!8.57e-09!131;UBERON:0009142!8.57e-09!131;UBERON:0001041!4.52e-08!92;UBERON:0000077!8.80e-08!97;UBERON:0003887!8.45e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.39e-25,48;UBERON:0002405,2.39e-25,48;UBERON:0004177,5.39e-23,29;UBERON:0005057,5.39e-23,29;UBERON:0002390,6.75e-23,45;UBERON:0003061,6.75e-23,45;UBERON:0003408,1.43e-19,24;UBERON:0000077,3.03e-18,35;UBERON:0002370,3.71e-18,23;UBERON:0000974,3.71e-18,23;UBERON:0004807,3.71e-18,23;UBERON:0005058,3.71e-18,23;UBERON:0003351,3.71e-18,23;UBERON:0009113,3.71e-18,23;UBERON:0003295,3.71e-18,23;UBERON:0009722,3.71e-18,23;UBERON:0005562,3.71e-18,23;UBERON:0007690,3.71e-18,23;UBERON:0006562,3.00e-17,24;UBERON:0001557,3.00e-17,24;UBERON:0001042,3.00e-17,24;UBERON:0008814,3.00e-17,24;UBERON:0009145,3.00e-17,24;UBERON:0000072,6.19e-15,27;UBERON:0003081,3.62e-13,87;UBERON:0007811,8.90e-12,36;UBERON:0000926,1.20e-10,120;UBERON:0004120,1.20e-10,120;UBERON:0006603,1.20e-10,120;UBERON:0001004,1.44e-09,42;UBERON:0000153,2.92e-09,43;UBERON:0000065,1.19e-08,41;UBERON:0000490,9.25e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,6.71441281896197,0.422366166455,0,0.68487187290202,0.239316476986009,7.01922992717943,4.54586092578786,1.33243904726265,2.02475267389826,0.699561878128147,12.7762176970086,12.4774134581222,9.33657233955666,0.255129870453209,1.68794617041505,2.61199789138935,1.27993938234725,0.68822784320151,0,0,0,0,0,0,0,0,0,0,0,0,10.4632907684227,3.906676722619,5.75876118371178,14.7057872007754,11.6117732442936,10.1957174136542,0,0,0,0,0,0,0,0,0,2.01339127269284,2.90144856804538,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,11.1343289968284,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0.289198713839823,1.76922110389975,0.323533699894818,1.10420759230197,1.93950101254089,0,0,0,0.255457055208591,0,0,0.127070227073065,0.149790639404823,0,0,0,0,0,0,0.101839363850316,1.36847667671102,0.252722758433675,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0,0.702213187313235,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0.439100230582101,0,0.210289948564127,0,0.330418782983798,0,0,0,0,0,0,0,0.474529061544512,0,0.251335208800269,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0.295220295959204,0,0.123397163921801,0.296452627087149,0,0.196558995113203,0,0.608580364165509,0.482354319504834,0.50925170356284,0.575392274901621,0,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0.358794827043824,0,0.554259570499814,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.315270288212382,0.221464689648775,0,0.655453258862952,0.690739927463582,0.433947175744535,0,0,0.983528546038072,0.551873492609465,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0.164140899745061,0,0.18542530201051,4.10090113914846,0.619160603889667,0.555583582109135,2.26042148405629,2.46049609897845,2.97411625168479,0,0.419854356970974,0.138199973804424,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0.259229946583586,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0.288030006257865,3.79213344753814,0.405450430580328,1.54066435747241,2.20865399062252,2.14832034800978,2.78153896693771,1.9231271923195,2.36303243479324,2.1202954489111,3.27689268616499,3.02478555410522,3.80085734885034,3.17499077413087,5.14258369598903,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0,0,0.128050304809739,0,0,0,0,0,0,0.685738504770831,0,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0.467863216890817,0,0.191288332068843,0.220591419119515,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,6.71441281896197,0.422366166455,0,0.68487187290202,0.239316476986009,7.01922992717943,4.54586092578786,1.33243904726265,2.02475267389826,0.699561878128147,12.7762176970086,12.4774134581222,9.33657233955666,0.255129870453209,1.68794617041505,2.61199789138935,1.27993938234725,0.68822784320151,0,0,0,0,0,0,0,0,0,0,0,0,10.4632907684227,3.906676722619,5.75876118371178,14.7057872007754,11.6117732442936,10.1957174136542,0,0,0,0,0,0,0,0,0,2.01339127269284,2.90144856804538,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,11.1343289968284,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0.289198713839823,1.76922110389975,0.323533699894818,1.10420759230197,1.93950101254089,0,0,0,0.255457055208591,0,0,0.127070227073065,0.149790639404823,0,0,0,0,0,0,0.101839363850316,1.36847667671102,0.252722758433675,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0,0.702213187313235,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0.439100230582101,0,0.210289948564127,0,0.330418782983798,0,0,0,0,0,0,0,0.474529061544512,0,0.251335208800269,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0.295220295959204,0,0.123397163921801,0.296452627087149,0,0.196558995113203,0,0.608580364165509,0.482354319504834,0.50925170356284,0.575392274901621,0,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0.358794827043824,0,0.554259570499814,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.315270288212382,0.221464689648775,0,0.655453258862952,0.690739927463582,0.433947175744535,0,0,0.983528546038072,0.551873492609465,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0.164140899745061,0,0.18542530201051,4.10090113914846,0.619160603889667,0.555583582109135,2.26042148405629,2.46049609897845,2.97411625168479,0,0.419854356970974,0.138199973804424,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0.259229946583586,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0.288030006257865,3.79213344753814,0.405450430580328,1.54066435747241,2.20865399062252,2.14832034800978,2.78153896693771,1.9231271923195,2.36303243479324,2.1202954489111,3.27689268616499,3.02478555410522,3.80085734885034,3.17499077413087,5.14258369598903,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0,0,0.128050304809739,0,0,0,0,0,0,0.685738504770831,0,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0.467863216890817,0,0.191288332068843,0.220591419119515,0.231867835620421 | ||
|short_description=p1@Gm19897 | |short_description=p1@Gm19897 | ||
}} | }} |
Latest revision as of 13:09, 26 September 2015
Short description: | p1@Gm19897 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm19897_5end |
Coexpression cluster: | MCL_coexpression_mm9:177 |
Association with transcript: | 133bp_to_NR_040339, uc009fzv.1_5end |
EntrezGene: | Gm19897 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 1.78e-10 | 25 |
megakaryocyte progenitor cell | 1.68e-09 | 6 |
megakaryocyte | 1.68e-09 | 6 |
lymphoid lineage restricted progenitor cell | 3.51e-08 | 12 |
hematopoietic cell | 1.30e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.30e-07 | 32 |
hematopoietic stem cell | 1.30e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.30e-07 | 32 |
lymphocyte | 1.81e-07 | 13 |
common lymphoid progenitor | 1.81e-07 | 13 |
T cell | 7.94e-07 | 11 |
pro-T cell | 7.94e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 6.22e-08 | 3 |
muscle cancer | 6.22e-08 | 3 |