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FFCP PHASE1:Mm9::chr4:136158556..136158675,-: Difference between revisions

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(Created page with "{{FFCP |id=chr4:136158556..136158675,- |short_description=p1@Kdm1a |description=CAGE_peak_1_at_Kdm1a_5end |association_with_transcript=0bp_to_ENSMUST00000105847,ENSMUST000...")
 
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{{FFCP
{{FFCP
|id=chr4:136158556..136158675,-
|DHSsupport=NA
|short_description=p1@Kdm1a
|DPIdataset=NA
|description=CAGE_peak_1_at_Kdm1a_5end
|association_with_transcript=0bp_to_ENSMUST00000105847,ENSMUST00000116273,NM_133872,uc008vig.2_5end
|EntrezGene=99982
|EntrezGene=99982
|HGNC=
|HGNC=
|MCL_coexpression_id=335
|TSSclassifier=NA
|UniProt=A3KG93,Q6ZQ88
|UniProt=A3KG93,Q6ZQ88
|association_with_transcript=0bp_to_ENSMUST00000105847,ENSMUST00000116273,NM_133872,uc008vig.2_5end
|cluster_id=chr4:136158556..136158675,-
|description=CAGE_peak_1_at_Kdm1a_5end
|id=chr4:136158556..136158675,-
|ontology_enrichment_celltype=CL:0000117!9.21e-08!23;CL:0000337!9.21e-08!23;CL:0000540!1.60e-07!33;CL:0000047!1.60e-07!33;CL:0000031!1.60e-07!33;CL:0000404!1.60e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,9.21e-08,23;CL:0000337,9.21e-08,23;CL:0000540,1.60e-07,33;CL:0000047,1.60e-07,33;CL:0000031,1.60e-07,33;CL:0000404,1.60e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.57e-11,95;UBERON:0000924,1.57e-11,95;UBERON:0006601,1.57e-11,95;UBERON:0003056,4.29e-11,49;UBERON:0010371,6.09e-11,73;UBERON:0002346,3.32e-10,64;UBERON:0003075,3.32e-10,64;UBERON:0007284,3.32e-10,64;UBERON:0002780,1.24e-09,39;UBERON:0001890,1.24e-09,39;UBERON:0006240,1.24e-09,39;UBERON:0003080,2.25e-09,40;UBERON:0001016,2.41e-09,75;UBERON:0001017,2.56e-09,73;UBERON:0000073,4.87e-09,54;UBERON:0001049,5.13e-09,52;UBERON:0005068,5.13e-09,52;UBERON:0006241,5.13e-09,52;UBERON:0007135,5.13e-09,52;UBERON:0000955,2.51e-08,47;UBERON:0006238,2.51e-08,47;UBERON:0002616,3.29e-08,46;UBERON:0002020,7.32e-08,34;UBERON:0003528,8.39e-07,29;UBERON:0002791,8.39e-07,29;UBERON:0001893,8.39e-07,29
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|phase1_expression=45.1619748835519,16.7508195666893,16.3799726180233,29.3390284967625,25.5456822272637,25.3497700586954,19.3898491694286,18.7228818990286,61.9470377467334,38.8547113694509,32.0177600581694,25.9259516734843,23.9681021903688,21.9425210071683,18.6541466616771,17.412872995525,17.4890469532037,19.0854610041734,24.4063691818215,20.7950929381035,34.3574892210322,22.539045922601,20.373583552837,14.0793332058198,11.6998733344257,14.9300310669905,13.7843838770904,18.9614684763582,16.1519906537918,16.1299283046356,18.181901873735,21.5910428976275,17.8368788399525,0,21.9527231010969,19.2832188615851,17.3543952823014,16.3227335987394,16.4080422349998,16.2292360631877,15.8822501768374,13.6609096991689,15.0508209439658,10.8271263458996,10.239070053171,14.3166466686112,15.6478268869608,23.3286917327078,20.4308149943059,21.970578595394,21.4179225086805,14.3752564364972,26.5096517571223,33.3666585325218,36.970317905671,21.8670520630555,22.349608315223,28.3619650752593,78.9034197352431,71.4137822017244,64.0169717541241,12.5372476865579,10.6715375533337,13.0485459005803,10.8775299882367,9.9467216092454,20.0732074047331,29.2005912044381,105.867094166956,105.979661590377,101.166306410015,32.8498632064374,30.4798586513227,84.7636330567482,121.148675367051,87.325784727952,28.6301290598411,30.5172738023599,28.5708151856613,73.5925485534482,97.4343404365663,75.0115253601734,22.8930059181132,25.8870800614573,31.9348337853533,37.1232017696821,41.7149024741372,58.3430265433191,32.5622631332691,28.6416212804717,16.232411367294,5.16254326188832,9.51959867190851,4.85732872474035,9.09686984426737,4.92829575807069,13.7635531729117,15.3387290320252,12.4697282209377,13.7802434059033,46.9008587856346,37.2146784501522,58.6052051325285,63.9960032837998,28.360326372469,35.977100897464,24.7706978057244,19.7538111913974,17.0899003207133,16.7739617143252,30.5334175108399,22.2259799167863,20.0635482612771,22.3069508017881,22.5770317700553,17.9703225601436,44.2478992244529,13.7369389073916,17.6922110389975,28.6327324406914,24.2925670306433,16.4857586065976,20.5030937339934,37.475942017478,33.5114730901528,18.13745091981,34.0274953596814,29.395233818677,29.6073629080241,26.5129431746536,29.2800385803921,89.5915530564723,33.0266208365325,39.6358958862012,30.5448425502553,31.474805035145,36.1529741668623,22.0200337979865,18.7014841240919,16.2040229032585,42.8096257347295,39.7730640669908,39.4336064273715,45.0607405328788,50.006826876226,49.1956685893823,60.9998226883835,19.9201595469042,51.0896143250836,49.7348990841365,40.4687585577082,33.7561427938465,32.2534809101694,36.5664774848275,33.9540525073107,34.8309966932363,13.3420505589515,10.5512641917033,17.9023004619223,27.5477277472218,32.8336483973535,31.3307986942166,31.487049832833,31.4822770795846,28.8479501099397,24.6485981435432,27.6321603441608,32.2272344933388,28.3042941851186,23.6401148273897,23.2667483396606,19.8831982898452,16.0271584162467,21.8756462579406,24.1833440848746,74.9145578121191,14.2080076683033,10.8424732332053,34.1261200856374,38.5512875288328,34.1498772503547,25.0087570532945,22.4601824283319,20.5443676201564,18.506633400236,22.3990578424655,22.6201687920243,21.6862554524854,23.9805827156518,24.268124033664,19.2362864388478,18.9184209591649,37.5542443887102,40.3297249512343,36.0664754153857,31.3623044881784,31.0323979468201,32.0520696898756,25.9902167580697,18.5988786454299,16.6418651511857,15.6714398180687,10.0793893209631,23.024624588821,22.0146074526787,17.7641068784034,18.8659912891308,19.5353499399458,17.569183772918,17.8371605219503,20.4290385736545,9.88421087477093,18.6898668485561,14.8856379067401,14.9778083094989,10.8608917517258,10.9432422248366,10.6137574699941,19.9533445379933,36.9508252952445,37.80787453455,33.9490171550376,32.6219445121018,30.4861388544105,22.3761022432853,36.0997248536928,26.1674339216277,28.7904096543407,33.1665918807573,19.3358711364571,23.4851575337618,24.7349890174385,9.04747703635634,10.3342079925555,25.0799779239708,22.3508764506833,22.9587343682543,28.4824398419054,19.0164536636943,22.4699125211892,23.6631164562193,27.3307121007647,28.0050417052639,30.5880061379267,28.5182302825464,35.3845663486041,38.457016659115,33.6094236598009,31.2277344577754,33.4174169078679,25.5492153374884,33.2982678857767,39.4186441635654,27.2200702904683,25.2215762845929,36.1743147870922,38.9997388484529,25.2730806872903,21.8523400731772,22.4427657999067,36.4383893367192,35.262771759318,23.1723295950069,17.3820216864699,11.5960469432499,27.8465966770104,35.7461586041477,40.5137461570448,43.5938764347883,48.4401699171399,54.443451728178,42.986885042099,37.6817257178857,42.0161629778147,25.3445444708807,38.1297727554876,20.2886126210565,40.891790729487,33.2616718993565,30.940530488144,27.6943838087277,32.4998981495221,21.2781010739791,23.7344386573452,18.1123133645724,35.0857675537478,22.5937323391048,20.1554248995019,17.3601669205702,14.6418030852174,50.483593708175,37.0871348657694,46.296991224482,15.2747298882418,43.179863123825,32.9377536745495,27.0013352054503,27.3905667778954,24.2382445758257,23.0618032318043,26.9450265664595,17.275892170946,24.8860748720242,24.853572523477,101.464728963154,36.9305868728628,39.048203747875,46.8627363909155,44.8184587467727,37.8461721099343,36.1460295028922,43.0976513833475,42.78261252569,63.0534555355876,67.3990214643405,25.9129118915106,39.3286917662919,30.7105761922833,30.1416309308484,26.8540043501222,30.000884571971,29.5680805819123,29.68559496209,32.3092639834072,29.0347933355549,32.4660316140626,30.0170272678437,36.9453471898865,36.5824703828311,22.2195775942907,43.2872609079426,31.5792775265354,49.5259618274031,21.8304241256375,21.5834846768859,26.7401371430207,27.2247841430414,29.0911820340511,43.4858918815141,44.6515479411962,42.3942679945154,30.5898664571764,33.5690434687615,27.1941803060292,38.4762825132129,35.1250538514892,31.7199686288943,38.3142630696347,65.801178368368,51.873233542134,52.4152169665192,37.195327711449,41.0841798750845,39.526354316753,32.2257755312342,30.4931884713563,31.1291633304061,27.5439960822539,28.6431608875971,33.0096097425633,35.4901313310854,38.671192052541,39.3432962345951,31.9116773159659,34.4176448056221,38.3889348722773,37.4998169731009,39.4493105960185,33.2583174813853,31.7681693025214,36.2423008719928,31.6855188258476,33.4088300474424,31.4766341357037,35.1221707915723,26.0439014323464,30.6917297291648,28.0571135828869,36.8954906366182,39.5002974326009,37.2400249284417,34.8607892668423,32.794123866794,45.9651463405821,31.1129039232393,32.2306581072447,32.5190164517034,24.0444646840272,19.9406338633562
|short_description=p1@Kdm1a
}}
}}

Latest revision as of 13:10, 26 September 2015

Short description:p1@Kdm1a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Kdm1a_5end
Coexpression cluster:MCL_coexpression_mm9:335
Association with transcript: 0bp_to_ENSMUST00000105847, ENSMUST00000116273, NM_133872, uc008vig.2_5end
EntrezGene:Kdm1a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Kdm1a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G745.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I516.75
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I616.38
CD326+ enterocyte, pool1.CNhs13542.11848-124I329.34
CD326+ enterocyte, pool2.CNhs13197.11849-124I425.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I725.35
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I819.39
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E918.72
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E761.95
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F238.85
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E632.02
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F125.93
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E423.97
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E821.94
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A118.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A317.41
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A517.49
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A219.09
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A424.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A620.80
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A334.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H222.54
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I920.37
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D114.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.70
GP2+ M cell, pool1.CNhs13228.11845-124H914.93
GP2+ M cell, pool2.CNhs13231.11846-124I113.78
GP2+ M cell, pool3.CNhs13240.11847-124I218.96
Ileum epithelium, pool1.CNhs13199.10252-104B916.15
Ileum epithelium, pool2.CNhs13232.10253-104C116.13
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C818.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I321.59
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G617.84
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F521.95
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F619.28
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F717.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G816.32
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H116.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H316.23
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G915.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H213.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H415.05
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D810.83
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D910.24
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B314.32
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B715.65
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C223.33
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B820.43
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C321.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C421.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C414.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A226.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I933.37
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A136.97
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C121.87
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E122.35
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C528.36
Mouse Granule cells, donor1.CNhs12131.11713-123C378.90
Mouse Granule cells, donor2.CNhs12357.11731-123E371.41
Mouse Granule cells, donor3.CNhs12108.11636-122C764.02
Mouse Meningeal cells, donor1.CNhs12132.11716-123C612.54
Mouse Meningeal cells, donor3.CNhs12109.11639-122D110.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C713.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E710.88
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D29.95
Mouse Microglia, donor1.CNhs12629.11718-123C820.07
Mouse Microglia, donor2.CNhs12634.11736-123E829.20
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5105.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5105.98
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9101.17
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F132.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D530.48
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D284.76
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2121.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D687.33
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D328.63
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F330.52
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D728.57
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D473.59
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F497.43
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D875.01
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E422.89
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E525.89
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I631.93
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D637.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F641.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E158.34
Mouse Schwann, donor1.CNhs12507.11728-123D932.56
Mouse Schwann, donor2.CNhs12573.11746-123F928.64
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G316.23
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C49.52
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.86
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.10
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.93
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A713.76
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I715.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E312.47
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I813.78
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G646.90
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H137.21
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I858.61
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B664.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G128.36
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G235.98
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G324.77
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B619.75
accessory axillary lymph node, adult.CNhs10475.1063-29H917.09
adrenal gland, adult.CNhs10508.49-24D716.77
adrenal gland, embryo E14.CNhs11038.406-44C530.53
adrenal gland, embryo E16.CNhs11004.1254-43D622.23
adrenal gland, embryo E17.CNhs11043.1263-45I120.06
adrenal gland, embryo E18.CNhs11026.1262-18F522.31
adrenal gland, neonate N00.CNhs11191.1311-23C122.58
adrenal gland, neonate N25.CNhs11223.1377-27I317.97
amnion, adult pregnant day17.5.CNhs10488.583-22A844.25
aorta, adult.CNhs10498.46-23H113.74
bone (os femoris), adult.CNhs10483.56-12G217.69
bone (os femoris), neonate N02.CNhs11227.1985-43F528.63
bone (os femoris), neonate N16.CNhs11225.1525-43A624.29
bone (os femoris), neonate N20.CNhs11195.1350-25C316.49
cecum, adult.CNhs10467.37-13H420.50
cerebellum, adult.CNhs10494.15-8B237.48
cerebellum, neonate N30.CNhs11135.1395-42I233.51
colon, adult.CNhs10468.36-18H718.14
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C734.03
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D129.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D429.61
corpora quadrigemina, adult.CNhs10501.16-22A426.51
corpus striatum, adult.CNhs10487.19-21D829.28
corpus striatum, neonate N00.CNhs11226.630-43F189.59
cortex, adult.CNhs10473.12-14D533.03
cortex, neonate N30.CNhs11107.1392-42F239.64
diencephalon, adult.CNhs10482.20-12F230.54
diencephalon, neonate N30.CNhs11201.1388-42B231.47
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B136.15
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A222.02
epididymis, adult.CNhs10490.58-23B218.70
eyeball, adult.CNhs10484.31-12G416.20
eyeball, embryo E12.CNhs11016.345-16C642.81
eyeball, embryo E14.CNhs10521.399-16E239.77
eyeball, embryo E15.CNhs10593.426-16C939.43
eyeball, embryo E17.CNhs11023.1261-18D445.06
eyeball, neonate N00.CNhs11207.633-15C650.01
eyeball, neonate N01.CNhs11140.1532-43E749.20
eyeball, neonate N02.CNhs11205.1551-44G861.00
eyeball, neonate N16.CNhs11188.777-19A219.92
forelimb, embryo E11.CNhs10596.335-25E251.09
forelimb, embryo E12.CNhs10600.359-14H249.73
forelimb, embryo E13.CNhs10589.384-1E240.47
forelimb, embryo E14.CNhs10577.413-26A833.76
forelimb, embryo E15.CNhs11007.437-20E732.25
forelimb, embryo E17.CNhs10598.1517-43C436.57
forelimb, embryo E18.CNhs11008.1520-43B533.95
gonad, embryo E13.CNhs11044.1564-45I634.83
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C813.34
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D210.55
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D517.90
heart, embryo E11.CNhs10586.331-24E927.55
heart, embryo E12.CNhs11015.353-12F532.83
heart, embryo E13.CNhs11013.376-3I931.33
heart, embryo E14.CNhs10597.403-26D431.49
heart, embryo E15.CNhs11017.431-16C831.48
heart, embryo E16.CNhs11021.457-17C628.85
heart, embryo E17.CNhs11025.479-18E524.65
heart, embryo E18.CNhs11030.1283-20G327.63
heart, neonate N00.CNhs11213.639-21E332.23
heart, neonate N03.CNhs11221.1349-25I228.30
heart, neonate N10.CNhs11118.749-24G123.64
heart, neonate N16.CNhs11209.782-15G123.27
heart, neonate N20.CNhs11127.821-26I619.88
heart, neonate N25.CNhs11196.1351-25D316.03
heart, neonate N30.CNhs11202.1390-42D221.88
hippocampus, adult.CNhs10478.13-16E824.18
hippocampus, neonate N00.CNhs11228.627-43G174.91
intestinal mucosa, adult.CNhs10506.860-29I314.21
intestine, adult.CNhs10496.178-9A310.84
intestine, embryo E12.CNhs11019.1251-16I534.13
intestine, embryo E13.CNhs11010.381-16D538.55
intestine, embryo E15.CNhs10602.976-16D834.15
intestine, embryo E16.CNhs10585.463-22H425.01
intestine, embryo E17.CNhs10582.482-18D322.46
intestine, embryo E18.CNhs10526.1289-20F720.54
intestine, neonate N00.CNhs11126.644-26D118.51
intestine, neonate N01.CNhs11192.1322-23E922.40
intestine, neonate N06.CNhs11102.688-20B822.62
intestine, neonate N07.CNhs11095.720-20F221.69
intestine, neonate N10.CNhs11098.755-23A523.98
intestine, neonate N20.CNhs11187.827-18D124.27
intestine, neonate N25.CNhs11121.1352-25E319.24
intestine, neonate N30.CNhs11131.1384-42G118.92
kidney, embryo E14.CNhs10606.411-4I937.55
kidney, embryo E15.CNhs10997.434-16F840.33
kidney, embryo E16.CNhs10584.464-22A536.07
kidney, embryo E17.CNhs11028.483-18I231.36
kidney, embryo E18.CNhs11001.1288-20C731.03
kidney, neonate N00.CNhs11214.646-21G732.05
kidney, neonate N10.CNhs11206.758-6D525.99
kidney, neonate N20.CNhs11113.832-19I118.60
kidney, neonate N25.CNhs11122.1353-25F316.64
kidney, neonate N30.CNhs11203.1385-42H115.67
liver, adult pregnant day01.CNhs10466.508-5B210.08
liver, embryo E12.CNhs10601.355-15F823.02
liver, embryo E13.CNhs10524.378-3H622.01
liver, embryo E14.CNhs10594.409-16E117.76
liver, embryo E15.CNhs10520.433-16D718.87
liver, embryo E16.CNhs10523.462-17F519.54
liver, embryo E17.CNhs10510.481-18A317.57
liver, embryo E18.CNhs10579.499-43G417.84
liver, neonate N00.CNhs11117.641-24F420.43
liver, neonate N03.CNhs11123.1345-25G29.88
liver, neonate N06.CNhs11101.684-20A818.69
liver, neonate N07.CNhs11103.716-20H214.89
liver, neonate N10.CNhs11115.751-24B914.98
liver, neonate N20.CNhs11220.823-25A310.86
liver, neonate N25.CNhs11198.1368-26H110.94
liver, neonate N30.CNhs11106.1382-42D110.61
lung, adult.CNhs10474.28-22B119.95
lung, embryo E12.CNhs10522.354-16G236.95
lung, embryo E14.CNhs10604.404-26F837.81
lung, embryo E15.CNhs11020.432-17C533.95
lung, embryo E16.CNhs10998.458-17B632.62
lung, embryo E17.CNhs10605.480-44A630.49
lung, embryo E18.CNhs10583.1287-20I622.38
lung, neonate N00.CNhs11224.640-42C636.10
lung, neonate N06.CNhs11212.683-20E526.17
lung, neonate N07.CNhs11111.715-19A328.79
lung, neonate N10.CNhs11219.750-23E633.17
lung, neonate N20.CNhs11109.822-18A419.34
lung, neonate N25.CNhs11119.1359-25C723.49
lung, neonate N30.CNhs11133.1394-42H224.73
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A110.33
mammary gland, adult lactating day02.CNhs10480.595-22B625.08
mammary gland, adult pregnant day19.CNhs10476.588-5H222.35
medulla oblongata, adult.CNhs10477.17-12C222.96
medulla oblongata, neonate N30.CNhs11200.1396-42A328.48
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C719.02
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C222.47
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E123.66
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E227.33
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E328.01
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D730.59
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D828.52
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D935.38
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D438.46
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D533.61
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D631.23
olfactory brain, adult.CNhs10489.18-22I933.42
ovary, adult.CNhs10507.91-2I725.55
ovary, embryo E18.CNhs11040.505-44H733.30
ovary, neonate N00.CNhs11217.1299-22I439.42
oviduct, adult pregnant day01.CNhs10500.988-6G627.22
pancreas, adult.CNhs10486.34-16E425.22
pancreas, embryo E14.CNhs11012.405-44F436.17
pancreas, embryo E15.CNhs11042.1556-45F239.00
pancreas, embryo E16.CNhs11003.460-26E525.27
pancreas, embryo E17.CNhs10599.1558-45G321.85
pancreas, embryo E18.CNhs10580.1535-43I722.44
pancreas, neonate N00.CNhs11105.645-26G936.44
pancreas, neonate N01.CNhs11138.1531-43D735.26
pancreas, neonate N02.CNhs11139.1539-43D823.17
pancreas, neonate N16.CNhs11136.787-43B617.38
pancreas, neonate N25.CNhs11094.1555-45E211.60
pancreas, neonate N30.CNhs11182.1548-44H527.85
pituitary gland, adult.CNhs10493.21-1G835.75
pituitary gland, embryo E12.CNhs11018.346-16E640.51
pituitary gland, embryo E13.CNhs11009.370-44C743.59
pituitary gland, embryo E14.CNhs11037.398-44A548.44
pituitary gland, embryo E15.CNhs10592.427-16B954.44
pituitary gland, embryo E16.CNhs11036.449-43F642.99
pituitary gland, embryo E17.CNhs11039.1265-44F537.68
pituitary gland, neonate N00.CNhs11190.1308-22E942.02
placenta, adult pregnant day10.CNhs10472.539-13I725.34
placenta, adult pregnant day17.CNhs10464.577-18G338.13
prostate, adult.CNhs10470.859-1F820.29
skin, adult.CNhs10492.30-1C340.89
skin, neonate N00.CNhs11124.650-25G433.26
skin, neonate N03.CNhs11215.662-22H330.94
skin, neonate N06.CNhs11097.693-20I527.69
skin, neonate N10.CNhs11108.762-6C432.50
small intestine, neonate N16.CNhs11114.790-21I121.28
spinal cord, adult.CNhs10505.24-13C923.73
spleen, adult.CNhs10465.25-2G218.11
spleen, embryo E16.CNhs11035.461-43C135.09
spleen, embryo E18.CNhs11011.1271-21F222.59
spleen, neonate N10.CNhs11116.752-24D120.16
spleen, neonate N20.CNhs11112.824-19H117.36
spleen, neonate N25.CNhs11099.1354-25G314.64
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C650.48
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C937.09
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D346.30
stomach, adult.CNhs10503.33-1H615.27
stomach, embryo E12.CNhs10588.356-43E343.18
stomach, embryo E15.CNhs10603.1252-16G832.94
stomach, embryo E16.CNhs11022.459-17D427.00
stomach, embryo E17.CNhs11006.1035-18D527.39
stomach, embryo E18.CNhs10999.1286-20C624.24
stomach, neonate N03.CNhs11193.1340-24B823.06
stomach, neonate N07.CNhs11210.718-18A926.95
stomach, neonate N25.CNhs11104.1355-25E417.28
stomach, neonate N30.CNhs11134.1386-42I124.89
submandibular gland, adult.CNhs10469.59-29C124.85
testis, adult.CNhs10504.57-7G5101.46
testis, embryo E13.CNhs11031.389-23F536.93
testis, embryo E15.CNhs11034.443-27C539.05
testis, embryo E16.CNhs11033.470-26G546.86
testis, embryo E17.CNhs11029.486-18I544.82
testis, embryo E18.CNhs11027.503-18G537.85
testis, neonate N00.CNhs11189.1300-22B736.15
testis, neonate N07.CNhs11222.726-26I443.10
testis, neonate N10.CNhs11204.763-44D942.78
testis, neonate N20.CNhs11110.839-18H363.05
testis, neonate N30.CNhs11130.1391-42E267.40
thymus, adult.CNhs10471.38-12B525.91
thymus, embryo E14.CNhs11041.402-44I439.33
thymus, embryo E15.CNhs11005.430-45I230.71
thymus, embryo E16.CNhs11002.456-26C530.14
thymus, embryo E17.CNhs10581.478-18C126.85
thymus, embryo E18.CNhs10595.1273-19G430.00
thymus, neonate N02.CNhs11181.1541-43F829.57
thymus, neonate N03.CNhs11137.2104-43C729.69
thymus, neonate N06.CNhs11197.681-26C432.31
thymus, neonate N07.CNhs11211.713-19D329.03
thymus, neonate N10.CNhs11194.748-24E432.47
thymus, neonate N20.CNhs11186.820-7A230.02
thymus, neonate N25.CNhs11125.1362-25G736.95
thymus, neonate N30.CNhs11132.1393-42G236.58
tongue, adult.CNhs10499.32-1B422.22
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H343.29
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F731.58
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G549.53
urinary bladder, adult.CNhs10481.879-12E421.83
uterus, adult pregnant day19.CNhs10497.590-15F521.58
uterus, adult.CNhs10509.92-27E526.74
vagina, adult.CNhs10502.89-27D527.22
vesicular gland, adult.CNhs10491.51-27F829.09
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A143.49
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A244.65
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A342.39
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D730.59
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A433.57
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A527.19
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A638.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A735.13
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A831.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A938.31
whole body, embryo E11.CNhs11014.324-5I865.80
whole body, embryo E12.CNhs10587.857-27C951.87
whole body, embryo E13.CNhs10512.372-23H252.42
whole body, embryo E14.5.CNhs10578.420-27D237.20
whole body, embryo E14.CNhs10519.395-14B141.08
whole body, embryo E16.CNhs10514.453-14F239.53
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G532.23
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G530.49
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G531.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G527.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G528.64
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G533.01
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G535.49
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G538.67
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G539.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G531.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G534.42
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G538.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G537.50
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G539.45
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G533.26
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G531.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G536.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G531.69
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G533.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G531.48
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G535.12
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G526.04
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G530.69
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G528.06
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G536.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G539.50
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G537.24
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G534.86
whole body, embryo E17.5.CNhs10513.490-9F932.79
whole body, embryo E17.CNhs10517.475-3I545.97
whole body, embryo E18.CNhs10516.493-3B331.11
whole body, neonate N00.CNhs10525.657-19C232.23
whole body, neonate N01.CNhs10576.659-23C632.52
whole body, neonate N06.CNhs10515.692-21D124.04
whole body, neonate N10.CNhs10518.761-6B419.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.21e-0823
neuroblast (sensu Vertebrata)9.21e-0823
neuron1.60e-0733
neuronal stem cell1.60e-0733
neuroblast1.60e-0733
electrically signaling cell1.60e-0733

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure1.57e-1195
ectoderm1.57e-1195
presumptive ectoderm1.57e-1195
pre-chordal neural plate4.29e-1149
ecto-epithelium6.09e-1173
neurectoderm3.32e-1064
neural plate3.32e-1064
presumptive neural plate3.32e-1064
regional part of forebrain1.24e-0939
forebrain1.24e-0939
future forebrain1.24e-0939
anterior neural tube2.25e-0940
nervous system2.41e-0975
central nervous system2.56e-0973
regional part of nervous system4.87e-0954
neural tube5.13e-0952
neural rod5.13e-0952
future spinal cord5.13e-0952
neural keel5.13e-0952
brain2.51e-0847
future brain2.51e-0847
regional part of brain3.29e-0846
gray matter7.32e-0834
brain grey matter8.39e-0729
regional part of telencephalon8.39e-0729
telencephalon8.39e-0729
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